BLASTX nr result

ID: Scutellaria23_contig00004998 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00004998
         (1189 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004133980.1| PREDICTED: DNA repair protein RAD50-like [Cu...   508   e-141
ref|XP_002266665.2| PREDICTED: LOW QUALITY PROTEIN: DNA repair p...   507   e-141
ref|XP_003552170.1| PREDICTED: DNA repair protein RAD50-like [Gl...   503   e-140
ref|XP_002522807.1| DNA repair protein RAD50, putative [Ricinus ...   501   e-139
ref|XP_002300148.1| predicted protein [Populus trichocarpa] gi|2...   499   e-139

>ref|XP_004133980.1| PREDICTED: DNA repair protein RAD50-like [Cucumis sativus]
          Length = 1316

 Score =  508 bits (1308), Expect = e-141
 Identities = 258/336 (76%), Positives = 287/336 (85%)
 Frame = -1

Query: 1015 MSTVDKMLIKGIRSFDPENKNVITFFKPMTLIVGPNGAGKTTIIECLKVACTGELPPNAR 836
            MSTVDKMLIKGIRSFDPEN+NVITFFKP+TLIVGPNGAGKTTIIECLK++CTGELPPNAR
Sbjct: 1    MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR 60

Query: 835  SGHSFVHDPKVAGETETKGQIKLRFKTAARKDVVCIRSFQLTQKATKMEYKAIESVLQTI 656
            SGHSF+HDPKVAGETETKGQIKLRFKTAA KDVVCIRSFQLTQKA+KMEYKAIESV QTI
Sbjct: 61   SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVFQTI 120

Query: 655  NPQTGEKVCLSYRCADMDREIPALMGVSKAVLENVIFVHQDDANWPLQDPSTLKKKFDDI 476
            NP TGEKVCLSYRCADMDREIPALMGVSKAVLENVIFVHQD+ANWPLQDPSTLKKKFDDI
Sbjct: 121  NPHTGEKVCLSYRCADMDREIPALMGVSKAVLENVIFVHQDEANWPLQDPSTLKKKFDDI 180

Query: 475  FSATRYTKALEVIKKLHKDQAQEIKTYKLKLDHLQTLKDAAFKLRESIAQDEAKTETLNC 296
            FSATRYTKALEVIKKLHKDQA EIKTYKLKL++LQTLKDAA+KLRESI+QD+ KTE++  
Sbjct: 181  FSATRYTKALEVIKKLHKDQAHEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTESVKG 240

Query: 295  QMEELDVKIQSVDREIDQTEXXXXXXXXXXXQMVSKSGERRSKYEELQKRHXXXXXXXXX 116
            QM+EL+  IQ VD +I   E           Q+ +K+ ER + Y+E QK++         
Sbjct: 241  QMQELEKNIQDVDAKIHHAETLLKDVRKLQDQISTKTAERSTLYKEQQKQYAALSEENED 300

Query: 115  XXXXXXEWKSKFDERIAVLESKVNKLMREKTDIEEK 8
                  EWK+KF+ERIA+LESKV+KL RE  D+E K
Sbjct: 301  TDEELKEWKTKFEERIAILESKVSKLEREMNDLETK 336


>ref|XP_002266665.2| PREDICTED: LOW QUALITY PROTEIN: DNA repair protein RAD50-like [Vitis
            vinifera]
          Length = 1316

 Score =  507 bits (1306), Expect = e-141
 Identities = 259/336 (77%), Positives = 287/336 (85%)
 Frame = -1

Query: 1015 MSTVDKMLIKGIRSFDPENKNVITFFKPMTLIVGPNGAGKTTIIECLKVACTGELPPNAR 836
            MSTVDKMLIKGIRSFDPENK+VI FFKP+TLIVGPNGAGKTTIIECLK++CTGELPPNAR
Sbjct: 1    MSTVDKMLIKGIRSFDPENKHVIAFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR 60

Query: 835  SGHSFVHDPKVAGETETKGQIKLRFKTAARKDVVCIRSFQLTQKATKMEYKAIESVLQTI 656
            SGHSF+HDPKVAGETETKGQIKLRFKTAA KDVVCIRSFQLTQKA+KMEYKAIESVLQTI
Sbjct: 61   SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI 120

Query: 655  NPQTGEKVCLSYRCADMDREIPALMGVSKAVLENVIFVHQDDANWPLQDPSTLKKKFDDI 476
            NP TGEKVCLSYRCADMDREIPALMGVSKAVLENVIFVHQDDANWPLQDPSTLKKKFDDI
Sbjct: 121  NPHTGEKVCLSYRCADMDREIPALMGVSKAVLENVIFVHQDDANWPLQDPSTLKKKFDDI 180

Query: 475  FSATRYTKALEVIKKLHKDQAQEIKTYKLKLDHLQTLKDAAFKLRESIAQDEAKTETLNC 296
            FSATRYTKALEVIKKLHKDQAQEIKTYKLKL++LQ LKDAA+KLRESI QD+ KTE+L  
Sbjct: 181  FSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQILKDAAYKLRESIEQDQEKTESLKI 240

Query: 295  QMEELDVKIQSVDREIDQTEXXXXXXXXXXXQMVSKSGERRSKYEELQKRHXXXXXXXXX 116
            QM+EL+  IQ+VD +I  TE           Q+ +K+ ER + ++E QK++         
Sbjct: 241  QMQELENNIQNVDAKIQHTEATLKDLRKLQDQISTKTAERSTLFKEQQKQYAALAEENED 300

Query: 115  XXXXXXEWKSKFDERIAVLESKVNKLMREKTDIEEK 8
                  EWK+KF+ERIA+LESK++KL RE  D E K
Sbjct: 301  TDEELNEWKTKFEERIALLESKISKLEREMDDTETK 336


>ref|XP_003552170.1| PREDICTED: DNA repair protein RAD50-like [Glycine max]
          Length = 1316

 Score =  503 bits (1296), Expect = e-140
 Identities = 252/334 (75%), Positives = 287/334 (85%)
 Frame = -1

Query: 1015 MSTVDKMLIKGIRSFDPENKNVITFFKPMTLIVGPNGAGKTTIIECLKVACTGELPPNAR 836
            MSTVDKMLIKGIRSFDPENKNVITFFKP+TLIVGPNGAGKTTIIECLK++CTGELPPNAR
Sbjct: 1    MSTVDKMLIKGIRSFDPENKNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR 60

Query: 835  SGHSFVHDPKVAGETETKGQIKLRFKTAARKDVVCIRSFQLTQKATKMEYKAIESVLQTI 656
            SGHSF+HDPKVAGETETKGQIKLRFKTAA KDVVC+RSFQLTQKA+KMEYKAIESVLQTI
Sbjct: 61   SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCVRSFQLTQKASKMEYKAIESVLQTI 120

Query: 655  NPQTGEKVCLSYRCADMDREIPALMGVSKAVLENVIFVHQDDANWPLQDPSTLKKKFDDI 476
            NP TGEKVCLSYRCADMD+EIPALMGVSKA+LENVIFVHQD+ANWPLQDPSTLKKKFDDI
Sbjct: 121  NPHTGEKVCLSYRCADMDKEIPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDI 180

Query: 475  FSATRYTKALEVIKKLHKDQAQEIKTYKLKLDHLQTLKDAAFKLRESIAQDEAKTETLNC 296
            FSATRYTKALEVIKKLHK+QAQEIKTYKLKL++LQTLKDAA+KLRESIAQD+ KTE+  C
Sbjct: 181  FSATRYTKALEVIKKLHKEQAQEIKTYKLKLENLQTLKDAAYKLRESIAQDQEKTESAEC 240

Query: 295  QMEELDVKIQSVDREIDQTEXXXXXXXXXXXQMVSKSGERRSKYEELQKRHXXXXXXXXX 116
            Q+++LD  IQ +D +I  TE           Q+ +K+ +R   ++E QK++         
Sbjct: 241  QLQQLDGSIQELDHKIHHTEETLKYLRKLQEQISTKTAQRSILFKEQQKQYLALTEEIED 300

Query: 115  XXXXXXEWKSKFDERIAVLESKVNKLMREKTDIE 14
                  EWK+KF+ERIA LE+K+++L RE  DI+
Sbjct: 301  TDEELMEWKTKFEERIASLETKISRLERETEDID 334


>ref|XP_002522807.1| DNA repair protein RAD50, putative [Ricinus communis]
            gi|223538045|gb|EEF39658.1| DNA repair protein RAD50,
            putative [Ricinus communis]
          Length = 1256

 Score =  501 bits (1290), Expect = e-139
 Identities = 251/336 (74%), Positives = 289/336 (86%)
 Frame = -1

Query: 1015 MSTVDKMLIKGIRSFDPENKNVITFFKPMTLIVGPNGAGKTTIIECLKVACTGELPPNAR 836
            MSTVDKMLIKGIRSFDPENK+VITFFKP+TLIVGPNGAGKTTIIECLK++CTGELPPNAR
Sbjct: 1    MSTVDKMLIKGIRSFDPENKHVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR 60

Query: 835  SGHSFVHDPKVAGETETKGQIKLRFKTAARKDVVCIRSFQLTQKATKMEYKAIESVLQTI 656
            SGHSF+HDPKVAGETETKGQIKLRFKTAA KDVVCIRSFQLTQKA+KMEYKAIESVLQTI
Sbjct: 61   SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI 120

Query: 655  NPQTGEKVCLSYRCADMDREIPALMGVSKAVLENVIFVHQDDANWPLQDPSTLKKKFDDI 476
            NP TGEKVCLSYRCADMDREIPALMGVSKA+LENVIFVHQD+ANWPLQDPSTLKKKFDDI
Sbjct: 121  NPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDI 180

Query: 475  FSATRYTKALEVIKKLHKDQAQEIKTYKLKLDHLQTLKDAAFKLRESIAQDEAKTETLNC 296
            FSATRYTKALEVIKKLHKDQAQEIKTYKLKL++LQTLKD+A+KLRESI QDE +TE+   
Sbjct: 181  FSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDSAYKLRESITQDEERTESSKV 240

Query: 295  QMEELDVKIQSVDREIDQTEXXXXXXXXXXXQMVSKSGERRSKYEELQKRHXXXXXXXXX 116
            Q++ L+ K+Q+VD +I Q +           ++++K+ ERR+ ++E Q+++         
Sbjct: 241  QIQALENKVQNVDVKIHQIQTTLKDLRNLQEKIMTKTVERRTLFKEQQRQYEALEEENED 300

Query: 115  XXXXXXEWKSKFDERIAVLESKVNKLMREKTDIEEK 8
                  EWK+KFDE++A +ES ++KL REK D E K
Sbjct: 301  PDEDLMEWKTKFDEKVAQMESSISKLKREKNDTEIK 336


>ref|XP_002300148.1| predicted protein [Populus trichocarpa] gi|222847406|gb|EEE84953.1|
            predicted protein [Populus trichocarpa]
          Length = 1316

 Score =  499 bits (1285), Expect = e-139
 Identities = 254/336 (75%), Positives = 282/336 (83%)
 Frame = -1

Query: 1015 MSTVDKMLIKGIRSFDPENKNVITFFKPMTLIVGPNGAGKTTIIECLKVACTGELPPNAR 836
            MSTVDKMLIKGIRSFDPENK+VITF +P+TLIVGPNGAGKTTIIECLKVACTGELPPNAR
Sbjct: 1    MSTVDKMLIKGIRSFDPENKHVITFLRPLTLIVGPNGAGKTTIIECLKVACTGELPPNAR 60

Query: 835  SGHSFVHDPKVAGETETKGQIKLRFKTAARKDVVCIRSFQLTQKATKMEYKAIESVLQTI 656
            SGHSF+HDPKVAGETETKGQIKLRFKTAA KDVVCIRSFQLTQKA+KMEYKAIESVLQTI
Sbjct: 61   SGHSFIHDPKVAGETETKGQIKLRFKTAAAKDVVCIRSFQLTQKASKMEYKAIESVLQTI 120

Query: 655  NPQTGEKVCLSYRCADMDREIPALMGVSKAVLENVIFVHQDDANWPLQDPSTLKKKFDDI 476
            NP TGEKVCLSYRCADMDREIPALMGVSKA+LENVIFVHQD+ANWPLQDPSTLKKKFDDI
Sbjct: 121  NPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDI 180

Query: 475  FSATRYTKALEVIKKLHKDQAQEIKTYKLKLDHLQTLKDAAFKLRESIAQDEAKTETLNC 296
            FSATRYTKALEVIKKLHKDQAQEIKTYKLKL++LQTLKDAA+KLRESI QD+ KTE L  
Sbjct: 181  FSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESIGQDQEKTEILKV 240

Query: 295  QMEELDVKIQSVDREIDQTEXXXXXXXXXXXQMVSKSGERRSKYEELQKRHXXXXXXXXX 116
            Q +EL+  +Q++D +I  TE           Q+  K+ ER + + E Q+++         
Sbjct: 241  QSQELESNLQNLDAKIHHTEVTLKDMRKLQDQITIKTAERSTLFREQQRQYAALAEENED 300

Query: 115  XXXXXXEWKSKFDERIAVLESKVNKLMREKTDIEEK 8
                  EWK+KFDE+IA LES + KL RE  D+E K
Sbjct: 301  TDEELQEWKTKFDEKIASLESNICKLEREMNDMETK 336


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