BLASTX nr result

ID: Scutellaria23_contig00004889 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00004889
         (1619 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002890883.1| hypothetical protein ARALYDRAFT_890616 [Arab...   431   e-118
ref|XP_002270765.1| PREDICTED: UDP-arabinose 4-epimerase 1 [Viti...   428   e-117
ref|NP_174350.2| UDP-arabinose 4-epimerase [Arabidopsis thaliana...   427   e-117
gb|AAN60309.1| unknown [Arabidopsis thaliana]                         424   e-116
ref|NP_001077632.1| UDP-arabinose 4-epimerase [Arabidopsis thali...   423   e-116

>ref|XP_002890883.1| hypothetical protein ARALYDRAFT_890616 [Arabidopsis lyrata subsp.
            lyrata] gi|297336725|gb|EFH67142.1| hypothetical protein
            ARALYDRAFT_890616 [Arabidopsis lyrata subsp. lyrata]
          Length = 418

 Score =  431 bits (1107), Expect = e-118
 Identities = 214/267 (80%), Positives = 237/267 (88%)
 Frame = +2

Query: 686  MLSFNRIRTQQRSNRSMSLGGMDYADPKKKNNYCGKIIMVSTLTALCILMLKQSPNFNTP 865
            M +F R R+Q R NRSMSLGG+DYADPKKKNNY GKI++ ++LTALCI MLKQSP FNTP
Sbjct: 1    MFNFGRARSQGRQNRSMSLGGLDYADPKKKNNYLGKILLTASLTALCIFMLKQSPTFNTP 60

Query: 866  SQFSSHEPGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNLGAIHVLQQLFPE 1045
            S FS HEPGVTHVLVTGGAGYIGSHAALRLLK+SYRVTIVDNLSRGNLGA+ +LQ+LFPE
Sbjct: 61   SVFSRHEPGVTHVLVTGGAGYIGSHAALRLLKESYRVTIVDNLSRGNLGAVKILQELFPE 120

Query: 1046 PGALQFIYADLGDAKSVNKIFSENAFDAVIHFAAVAYVGESTLDPLKYYHNITSNTLVVL 1225
            PG LQFIYADLGDAK+VNKIF+ENAFDAV+HFAAVAYVGEST  PLKYYHNITSNTLVVL
Sbjct: 121  PGRLQFIYADLGDAKAVNKIFTENAFDAVMHFAAVAYVGESTQFPLKYYHNITSNTLVVL 180

Query: 1226 EAMAAHGVNTLIYSSTCATYGEPEKMPITEETPQLPINPYGKAKKMAEDIIIDFSKTSNM 1405
            E MAAHGV TLIYSSTCATYGEP+ MPITEETPQ+PINPYGKAKKMAEDII+DFSK SNM
Sbjct: 181  ETMAAHGVKTLIYSSTCATYGEPDTMPITEETPQVPINPYGKAKKMAEDIILDFSKNSNM 240

Query: 1406 AIMILRLRGDKSIVGFDSLGISGDSWR 1486
            A+MILR     +++G D  G  G++ R
Sbjct: 241  AVMILRY---FNVIGSDPEGRLGEAPR 264


>ref|XP_002270765.1| PREDICTED: UDP-arabinose 4-epimerase 1 [Vitis vinifera]
            gi|297740899|emb|CBI31081.3| unnamed protein product
            [Vitis vinifera]
          Length = 418

 Score =  428 bits (1101), Expect = e-117
 Identities = 215/267 (80%), Positives = 238/267 (89%)
 Frame = +2

Query: 686  MLSFNRIRTQQRSNRSMSLGGMDYADPKKKNNYCGKIIMVSTLTALCILMLKQSPNFNTP 865
            ML+F R R Q R +RSM  GGM+YADPK+K+N  GKI++ +TLTALCILMLKQS NFNTP
Sbjct: 1    MLNFTRSRNQPRPSRSMPFGGMEYADPKRKSNVVGKILLAATLTALCILMLKQSSNFNTP 60

Query: 866  SQFSSHEPGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNLGAIHVLQQLFPE 1045
            S FS HEPGVTHVLVTGGAGYIGSHAALRLLKDS+RVTIVDNLSRGNLGAI VLQ+ FPE
Sbjct: 61   SPFSRHEPGVTHVLVTGGAGYIGSHAALRLLKDSHRVTIVDNLSRGNLGAIKVLQEQFPE 120

Query: 1046 PGALQFIYADLGDAKSVNKIFSENAFDAVIHFAAVAYVGESTLDPLKYYHNITSNTLVVL 1225
            PG LQFIYADLGDAK+VNKIFSENAFDAV+HFAAVAYVGESTL+PL+YYHNITSNTLVVL
Sbjct: 121  PGRLQFIYADLGDAKAVNKIFSENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVVL 180

Query: 1226 EAMAAHGVNTLIYSSTCATYGEPEKMPITEETPQLPINPYGKAKKMAEDIIIDFSKTSNM 1405
            EAMAAHGVNTLIYSSTCATYGEPEKMPITE+TPQ+PINPYGKAKKMAEDII+DFSK S M
Sbjct: 181  EAMAAHGVNTLIYSSTCATYGEPEKMPITEQTPQVPINPYGKAKKMAEDIILDFSKNSEM 240

Query: 1406 AIMILRLRGDKSIVGFDSLGISGDSWR 1486
            A+MILR     +++G D  G  G++ R
Sbjct: 241  AVMILRY---FNVIGSDPEGRLGEAPR 264


>ref|NP_174350.2| UDP-arabinose 4-epimerase [Arabidopsis thaliana]
            gi|79318985|ref|NP_001031118.1| UDP-arabinose 4-epimerase
            [Arabidopsis thaliana]
            gi|75313130|sp|Q9SA77.1|ARAE1_ARATH RecName:
            Full=UDP-arabinose 4-epimerase 1; AltName:
            Full=UDP-D-xylose 4-epimerase 1
            gi|4587518|gb|AAD25749.1|AC007060_7 Strong similarity to
            F19I3.8 gi|3033381 putative UDP-galactose-4-epimerase
            from Arabidopsis thaliana BAC gb|AC004238 and is a member
            of PF|01370 the NAD dependent epimerase/dehydratase
            family. EST gb|AA597338 comes from this gene [Arabidopsis
            thaliana] gi|13272475|gb|AAK17176.1|AF325108_1 unknown
            protein [Arabidopsis thaliana] gi|18086329|gb|AAL57628.1|
            At1g30620/T5I8_7 [Arabidopsis thaliana]
            gi|27363222|gb|AAO11530.1| At1g30620/T5I8_7 [Arabidopsis
            thaliana] gi|28395529|gb|AAO39213.1| UDP-D-xylose
            4-epimerase [Arabidopsis thaliana]
            gi|222423784|dbj|BAH19858.1| AT1G30620 [Arabidopsis
            thaliana] gi|332193130|gb|AEE31251.1| UDP-arabinose
            4-epimerase [Arabidopsis thaliana]
            gi|332193131|gb|AEE31252.1| UDP-arabinose 4-epimerase
            [Arabidopsis thaliana]
          Length = 419

 Score =  427 bits (1098), Expect = e-117
 Identities = 213/267 (79%), Positives = 236/267 (88%)
 Frame = +2

Query: 686  MLSFNRIRTQQRSNRSMSLGGMDYADPKKKNNYCGKIIMVSTLTALCILMLKQSPNFNTP 865
            M SF R R+Q R NRSMSLGG+DYADPKKKNNY GKI++ ++LTALCI MLKQSP FNTP
Sbjct: 1    MFSFGRARSQGRQNRSMSLGGLDYADPKKKNNYLGKILLTASLTALCIFMLKQSPTFNTP 60

Query: 866  SQFSSHEPGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNLGAIHVLQQLFPE 1045
            S FS HEPGVTHVLVTGGAGYIGSHAALRLLK+SYRVTIVDNLSRGNL A+ +LQ+LFPE
Sbjct: 61   SVFSRHEPGVTHVLVTGGAGYIGSHAALRLLKESYRVTIVDNLSRGNLAAVRILQELFPE 120

Query: 1046 PGALQFIYADLGDAKSVNKIFSENAFDAVIHFAAVAYVGESTLDPLKYYHNITSNTLVVL 1225
            PG LQFIYADLGDAK+VNKIF+ENAFDAV+HFAAVAYVGEST  PLKYYHNITSNTLVVL
Sbjct: 121  PGRLQFIYADLGDAKAVNKIFTENAFDAVMHFAAVAYVGESTQFPLKYYHNITSNTLVVL 180

Query: 1226 EAMAAHGVNTLIYSSTCATYGEPEKMPITEETPQLPINPYGKAKKMAEDIIIDFSKTSNM 1405
            E MAAHGV TLIYSSTCATYGEP+ MPITEETPQ+PINPYGKAKKMAEDII+DFSK S+M
Sbjct: 181  ETMAAHGVKTLIYSSTCATYGEPDIMPITEETPQVPINPYGKAKKMAEDIILDFSKNSDM 240

Query: 1406 AIMILRLRGDKSIVGFDSLGISGDSWR 1486
            A+MILR     +++G D  G  G++ R
Sbjct: 241  AVMILRY---FNVIGSDPEGRLGEAPR 264


>gb|AAN60309.1| unknown [Arabidopsis thaliana]
          Length = 419

 Score =  424 bits (1091), Expect = e-116
 Identities = 212/267 (79%), Positives = 235/267 (88%)
 Frame = +2

Query: 686  MLSFNRIRTQQRSNRSMSLGGMDYADPKKKNNYCGKIIMVSTLTALCILMLKQSPNFNTP 865
            M SF R R+Q R NRSMSLGG+DYADPKKKNNY GKI++ ++LTALCI MLKQSP FNTP
Sbjct: 1    MFSFGRARSQGRQNRSMSLGGLDYADPKKKNNYLGKILLTASLTALCIFMLKQSPTFNTP 60

Query: 866  SQFSSHEPGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNLGAIHVLQQLFPE 1045
            S FS HEPGVTHVLVTGGAGYIGSHAALRLLK+SYRVTIVDNLSRGNL A+ +LQ+LFPE
Sbjct: 61   SVFSRHEPGVTHVLVTGGAGYIGSHAALRLLKESYRVTIVDNLSRGNLAAVRILQELFPE 120

Query: 1046 PGALQFIYADLGDAKSVNKIFSENAFDAVIHFAAVAYVGESTLDPLKYYHNITSNTLVVL 1225
            PG LQFIYADLGDAK+VNKIF+ENAFDAV+HFAA AYVGEST  PLKYYHNITSNTLVVL
Sbjct: 121  PGRLQFIYADLGDAKAVNKIFTENAFDAVMHFAAGAYVGESTQFPLKYYHNITSNTLVVL 180

Query: 1226 EAMAAHGVNTLIYSSTCATYGEPEKMPITEETPQLPINPYGKAKKMAEDIIIDFSKTSNM 1405
            E MAAHGV TLIYSSTCATYGEP+ MPITEETPQ+PINPYGKAKKMAEDII+DFSK S+M
Sbjct: 181  ETMAAHGVKTLIYSSTCATYGEPDIMPITEETPQVPINPYGKAKKMAEDIILDFSKNSDM 240

Query: 1406 AIMILRLRGDKSIVGFDSLGISGDSWR 1486
            A+MILR     +++G D  G  G++ R
Sbjct: 241  AVMILRY---FNVIGSDPEGRLGEAPR 264


>ref|NP_001077632.1| UDP-arabinose 4-epimerase [Arabidopsis thaliana]
            gi|332193132|gb|AEE31253.1| UDP-arabinose 4-epimerase
            [Arabidopsis thaliana]
          Length = 418

 Score =  423 bits (1088), Expect = e-116
 Identities = 213/267 (79%), Positives = 236/267 (88%)
 Frame = +2

Query: 686  MLSFNRIRTQQRSNRSMSLGGMDYADPKKKNNYCGKIIMVSTLTALCILMLKQSPNFNTP 865
            M SF R R+Q R NRSMSLGG+DYADPKKKNNY GKI++ ++LTALCI MLKQSP FNTP
Sbjct: 1    MFSFGRARSQGRQNRSMSLGGLDYADPKKKNNYLGKILLTASLTALCIFMLKQSPTFNTP 60

Query: 866  SQFSSHEPGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNLGAIHVLQQLFPE 1045
            S FS HEPGVTHVLVTGGAGYIGSHAALRLLK+SYRVTIVDNLSRGNL A+ +LQ+LFPE
Sbjct: 61   S-FSRHEPGVTHVLVTGGAGYIGSHAALRLLKESYRVTIVDNLSRGNLAAVRILQELFPE 119

Query: 1046 PGALQFIYADLGDAKSVNKIFSENAFDAVIHFAAVAYVGESTLDPLKYYHNITSNTLVVL 1225
            PG LQFIYADLGDAK+VNKIF+ENAFDAV+HFAAVAYVGEST  PLKYYHNITSNTLVVL
Sbjct: 120  PGRLQFIYADLGDAKAVNKIFTENAFDAVMHFAAVAYVGESTQFPLKYYHNITSNTLVVL 179

Query: 1226 EAMAAHGVNTLIYSSTCATYGEPEKMPITEETPQLPINPYGKAKKMAEDIIIDFSKTSNM 1405
            E MAAHGV TLIYSSTCATYGEP+ MPITEETPQ+PINPYGKAKKMAEDII+DFSK S+M
Sbjct: 180  ETMAAHGVKTLIYSSTCATYGEPDIMPITEETPQVPINPYGKAKKMAEDIILDFSKNSDM 239

Query: 1406 AIMILRLRGDKSIVGFDSLGISGDSWR 1486
            A+MILR     +++G D  G  G++ R
Sbjct: 240  AVMILRY---FNVIGSDPEGRLGEAPR 263


Top