BLASTX nr result

ID: Scutellaria23_contig00004880 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00004880
         (1176 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534138.1| Protein YIF1A, putative [Ricinus communis] g...   479   e-133
ref|NP_564367.1| integral membrane HRF1-like protein [Arabidopsi...   462   e-128
ref|NP_191509.2| YIF1 integral membrane domain-containing protei...   458   e-126
ref|XP_002310429.1| predicted protein [Populus trichocarpa] gi|2...   456   e-126
dbj|BAE99732.1| hypothetical protein [Arabidopsis thaliana]           456   e-126

>ref|XP_002534138.1| Protein YIF1A, putative [Ricinus communis]
           gi|223525796|gb|EEF28242.1| Protein YIF1A, putative
           [Ricinus communis]
          Length = 269

 Score =  479 bits (1234), Expect = e-133
 Identities = 228/269 (84%), Positives = 248/269 (92%), Gaps = 6/269 (2%)
 Frame = +1

Query: 91  MYDNLGAQPGVPRPP-NAQPSPFGDSFYGASSGFIRGGLGAYGEKILGSSSEYVQSNISR 267
           MY+N+G QPGVPRPP N QP+PFG++FYGA SG IRGGLGAYGEKILGSSSEYVQSNISR
Sbjct: 1   MYNNVGTQPGVPRPPTNPQPNPFGNAFYGAGSGLIRGGLGAYGEKILGSSSEYVQSNISR 60

Query: 268 YFSDPQYYFQVNDQYVKNKLKVVLFPFLHRGHWTRISEPVGGRLSYKPPIYDINAPDLYI 447
           YFSDPQYYFQVNDQYV+NKLKVVLFPFLHRGHWTRI+EPVGGRLSYKPPIYDINAPDLYI
Sbjct: 61  YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAPDLYI 120

Query: 448 PFMAFGTYLVLAGLSLGLHGKFSPEALNWLFAKGLVGWGFQVGLLKMTLLSLGSAEAPLL 627
           PFMAFGTY+VLAGLSLGL+GKFSPE LNWLF KGL+GW  QV LLK+TLLSLGS EAPLL
Sbjct: 121 PFMAFGTYIVLAGLSLGLNGKFSPENLNWLFVKGLLGWFMQVALLKVTLLSLGSGEAPLL 180

Query: 628 DIVAYAGYTFTGLSIAVVGKLFWGYAYYFLLPWTCLCMGIFLVKTMKRVVF-----YDSS 792
           DIVAYAGYTFTG+ IAV+G++F  Y+YYFL+PW CLCMGIFLVKTMKRV+F     YDSS
Sbjct: 181 DIVAYAGYTFTGMCIAVLGRIFINYSYYFLMPWACLCMGIFLVKTMKRVLFAEVRTYDSS 240

Query: 793 RHHYLLLFIALAQFPLFIWLGNISLNWLF 879
           RHHYLLLFIALAQFPLF WLGNI++NWLF
Sbjct: 241 RHHYLLLFIALAQFPLFTWLGNITINWLF 269


>ref|NP_564367.1| integral membrane HRF1-like protein [Arabidopsis thaliana]
           gi|145324088|ref|NP_001077633.1| integral membrane
           HRF1-like protein [Arabidopsis thaliana]
           gi|14532658|gb|AAK64057.1| unknown protein [Arabidopsis
           thaliana] gi|21280943|gb|AAM44952.1| unknown protein
           [Arabidopsis thaliana] gi|21554340|gb|AAM63447.1|
           unknown [Arabidopsis thaliana]
           gi|332193168|gb|AEE31289.1| integral membrane HRF1-like
           protein [Arabidopsis thaliana]
           gi|332193169|gb|AEE31290.1| integral membrane HRF1-like
           protein [Arabidopsis thaliana]
          Length = 269

 Score =  462 bits (1189), Expect = e-128
 Identities = 220/268 (82%), Positives = 239/268 (89%), Gaps = 6/268 (2%)
 Frame = +1

Query: 91  MYDNLGAQPGVPRPP-NAQPSPFGDSFYGASSGFIRGGLGAYGEKILGSSSEYVQSNISR 267
           MY+N+G QPG+PRPP N +P PFG+ F GA SGFIRGGLGAYGE+ILGSSSEYVQSNISR
Sbjct: 1   MYNNMGPQPGMPRPPGNPEPGPFGNPFTGAGSGFIRGGLGAYGERILGSSSEYVQSNISR 60

Query: 268 YFSDPQYYFQVNDQYVKNKLKVVLFPFLHRGHWTRISEPVGGRLSYKPPIYDINAPDLYI 447
           YFSDPQYYFQVNDQYV+NKLKVVLFPFLHRGHWTRISEPVGGRLSYKPPIYDINAPDLYI
Sbjct: 61  YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRISEPVGGRLSYKPPIYDINAPDLYI 120

Query: 448 PFMAFGTYLVLAGLSLGLHGKFSPEALNWLFAKGLVGWGFQVGLLKMTLLSLGSAEAPLL 627
           PFMAFGTY+VLAGLSLGL+GKF+PEALNWLF KGLVGW  QV LLK+TLLSLGS EAPLL
Sbjct: 121 PFMAFGTYVVLAGLSLGLNGKFTPEALNWLFVKGLVGWFLQVMLLKVTLLSLGSGEAPLL 180

Query: 628 DIVAYAGYTFTGLSIAVVGKLFWGYAYYFLLPWTCLCMGIFLVKTMKRVVF-----YDSS 792
           DIVAY GY F GL +A   K+ WGY+YY L+PWTCLC GIFLVKTMKRV+F     YDSS
Sbjct: 181 DIVAYGGYAFAGLCLAGFAKIMWGYSYYALMPWTCLCTGIFLVKTMKRVLFAEVRSYDSS 240

Query: 793 RHHYLLLFIALAQFPLFIWLGNISLNWL 876
           +HHYLLLF+AL QFPL IWLGNIS+NWL
Sbjct: 241 KHHYLLLFLALVQFPLLIWLGNISVNWL 268


>ref|NP_191509.2| YIF1 integral membrane domain-containing protein [Arabidopsis
           thaliana] gi|332646412|gb|AEE79933.1| YIF1 integral
           membrane domain-containing protein [Arabidopsis
           thaliana] gi|385137882|gb|AFI41202.1| HRF1 protein,
           partial [Arabidopsis thaliana]
          Length = 269

 Score =  458 bits (1179), Expect = e-126
 Identities = 217/269 (80%), Positives = 239/269 (88%), Gaps = 6/269 (2%)
 Frame = +1

Query: 91  MYDNLGAQPGVPRPP-NAQPSPFGDSFYGASSGFIRGGLGAYGEKILGSSSEYVQSNISR 267
           MY+N+G +PG+  P  N QPSPFG+ F G  SG IR GLGAYGEKI GSSSEYVQSNISR
Sbjct: 1   MYNNMGPRPGMAMPQANPQPSPFGNPFSGPGSGLIRSGLGAYGEKIFGSSSEYVQSNISR 60

Query: 268 YFSDPQYYFQVNDQYVKNKLKVVLFPFLHRGHWTRISEPVGGRLSYKPPIYDINAPDLYI 447
           YFSDPQYYFQVNDQYV+NKLK+VL PFLHRGHWTRISEPVGGRLSYKPPIYDINAPDLYI
Sbjct: 61  YFSDPQYYFQVNDQYVRNKLKIVLLPFLHRGHWTRISEPVGGRLSYKPPIYDINAPDLYI 120

Query: 448 PFMAFGTYLVLAGLSLGLHGKFSPEALNWLFAKGLVGWGFQVGLLKMTLLSLGSAEAPLL 627
           P MAFGTY+VLAGLSLGL+GKF+PEALNWLF KG+VGW  QV LLK+TLLSLGS EAPLL
Sbjct: 121 PLMAFGTYVVLAGLSLGLYGKFTPEALNWLFVKGMVGWFLQVMLLKITLLSLGSGEAPLL 180

Query: 628 DIVAYAGYTFTGLSIAVVGKLFWGYAYYFLLPWTCLCMGIFLVKTMKRVVF-----YDSS 792
           DIVAYAGYTFTGL +AV+GK+ WGY+YY L+PWTCLC G+FLVKTMKRV+F     YDSS
Sbjct: 181 DIVAYAGYTFTGLCLAVLGKIIWGYSYYVLIPWTCLCTGVFLVKTMKRVLFAESRSYDSS 240

Query: 793 RHHYLLLFIALAQFPLFIWLGNISLNWLF 879
           RHHYLL+F+ALAQFPL IWLGNIS+NWLF
Sbjct: 241 RHHYLLIFVALAQFPLLIWLGNISVNWLF 269


>ref|XP_002310429.1| predicted protein [Populus trichocarpa] gi|222853332|gb|EEE90879.1|
           predicted protein [Populus trichocarpa]
          Length = 269

 Score =  456 bits (1174), Expect = e-126
 Identities = 218/267 (81%), Positives = 239/267 (89%), Gaps = 6/267 (2%)
 Frame = +1

Query: 91  MYDNLGAQPGVPRPP-NAQPSPFGDSFYGASSGFIRGGLGAYGEKILGSSSEYVQSNISR 267
           MY+N+G QPGVPRPP N QP+PFG++FYGA SG I+GGLGAYGEKILGSSSEYVQSNISR
Sbjct: 1   MYNNVGPQPGVPRPPTNPQPTPFGNAFYGAGSGLIKGGLGAYGEKILGSSSEYVQSNISR 60

Query: 268 YFSDPQYYFQVNDQYVKNKLKVVLFPFLHRGHWTRISEPVGGRLSYKPPIYDINAPDLYI 447
           YFSDPQYYFQVND YV+NKLKVVLFPFLHRGHWTRI+EPVGGRLSYKPPIYDINAPDLYI
Sbjct: 61  YFSDPQYYFQVNDHYVRNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAPDLYI 120

Query: 448 PFMAFGTYLVLAGLSLGLHGKFSPEALNWLFAKGLVGWGFQVGLLKMTLLSLGSAEAPLL 627
           PFMAFGTY+VLAGLSLGL+GKFSPEALNWLF KGL+GW  QV LLK+ LLSLGS EAPLL
Sbjct: 121 PFMAFGTYVVLAGLSLGLNGKFSPEALNWLFVKGLLGWFMQVALLKIILLSLGSGEAPLL 180

Query: 628 DIVAYAGYTFTGLSIAVVGKLFWGYAYYFLLPWTCLCMGIFLVKTMKRVVF-----YDSS 792
           D+VAYAGYTFTG+  AV+GK+  GY+YY L+P TCLCMGIFLVKTMKRV+F      DSS
Sbjct: 181 DMVAYAGYTFTGICFAVLGKILPGYSYYILMPCTCLCMGIFLVKTMKRVLFAEVRSVDSS 240

Query: 793 RHHYLLLFIALAQFPLFIWLGNISLNW 873
           RHHYLLL I L QFPLF WLGN+S+NW
Sbjct: 241 RHHYLLLLIGLVQFPLFAWLGNVSVNW 267


>dbj|BAE99732.1| hypothetical protein [Arabidopsis thaliana]
          Length = 269

 Score =  456 bits (1174), Expect = e-126
 Identities = 216/269 (80%), Positives = 238/269 (88%), Gaps = 6/269 (2%)
 Frame = +1

Query: 91  MYDNLGAQPGVPRPP-NAQPSPFGDSFYGASSGFIRGGLGAYGEKILGSSSEYVQSNISR 267
           MY+N+G +PG+  P  N QPSPFG+ F G  SG IR GLGAYGEKI GSSSEYVQSNISR
Sbjct: 1   MYNNMGPRPGMAMPQANPQPSPFGNPFSGPGSGLIRSGLGAYGEKIFGSSSEYVQSNISR 60

Query: 268 YFSDPQYYFQVNDQYVKNKLKVVLFPFLHRGHWTRISEPVGGRLSYKPPIYDINAPDLYI 447
           YFSDPQYYFQVNDQYV+NKLK+VL PFLHRGHWTRISEPVGGRLSYKPPIYDINAPDLYI
Sbjct: 61  YFSDPQYYFQVNDQYVRNKLKIVLLPFLHRGHWTRISEPVGGRLSYKPPIYDINAPDLYI 120

Query: 448 PFMAFGTYLVLAGLSLGLHGKFSPEALNWLFAKGLVGWGFQVGLLKMTLLSLGSAEAPLL 627
           P MAFGTY+VLAGLSLGL+GKF+PEALNWLF KG+VGW  QV LLK+TLLSLGS EAPLL
Sbjct: 121 PLMAFGTYVVLAGLSLGLYGKFTPEALNWLFVKGMVGWFLQVMLLKITLLSLGSGEAPLL 180

Query: 628 DIVAYAGYTFTGLSIAVVGKLFWGYAYYFLLPWTCLCMGIFLVKTMKRVVF-----YDSS 792
           DIVAYAGYTFTGL +AV+GK+ WGY+YY L+PWTCLC G+FLVK MKRV+F     YDSS
Sbjct: 181 DIVAYAGYTFTGLCLAVLGKIIWGYSYYVLIPWTCLCTGVFLVKAMKRVLFAESRSYDSS 240

Query: 793 RHHYLLLFIALAQFPLFIWLGNISLNWLF 879
           RHHYLL+F+ALAQFPL IWLGNIS+NWLF
Sbjct: 241 RHHYLLIFVALAQFPLLIWLGNISVNWLF 269


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