BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00004879
         (1650 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272750.1| PREDICTED: multisubstrate pseudouridine synt...   607   e-171
ref|XP_002512230.1| tRNA pseudouridine synthase d, putative [Ric...   597   e-168
emb|CBI34194.3| unnamed protein product [Vitis vinifera]              595   e-167
ref|XP_004142573.1| PREDICTED: putative pseudouridine synthase C...   586   e-165
ref|NP_187133.3| pseudouridine synthase [Arabidopsis thaliana] g...   566   e-159

>ref|XP_002272750.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Vitis
            vinifera]
          Length = 694

 Score =  607 bits (1566), Expect = e-171
 Identities = 308/483 (63%), Positives = 366/483 (75%), Gaps = 11/483 (2%)
 Frame = -1

Query: 1650 LSKMLGVKPRSFGFSGTKDKRAVTTQRVTVFKQRASRLAALNEKLIGIKVGNFCHVNDGL 1471
            + KMLG++PRSFGF+GTKDKR+V+TQRVTVFKQ A+RLAALNE+LIGIKVG+FCHV +GL
Sbjct: 209  IGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQHANRLAALNERLIGIKVGDFCHVREGL 268

Query: 1470 VLGKLQGNRFTITLRSVCAETEDIIRASATSLGQNGFINYFGLQRFGSSSIPTHLIGAAL 1291
            VLG+L GNRFTITLR V A++E+ I+ASA +LG+ GFINYFGLQRFGS S+PTHLIGAAL
Sbjct: 269  VLGQLLGNRFTITLRGVVADSEETIKASADALGRLGFINYFGLQRFGSGSVPTHLIGAAL 328

Query: 1290 LRGEWKAAVGMILDPREGEKDVTRNTREYYKQSGDIEGTLRQLPRYLVAERAILQCFQKC 1111
            LRGEW+ AV +ILDPREGE+D  R  REYYK+S DIEGTLRQ PR+LVAERAILQC +K 
Sbjct: 329  LRGEWETAVSLILDPREGERDAIRKAREYYKESDDIEGTLRQFPRHLVAERAILQCLKKY 388

Query: 1110 PGNYLQALLAIPRTLRMMFVHSYQSYLWNHAASMRVQKYGCHQVVLGDLVYCTEQETDKE 931
            PGNYLQAL AIPRTLRMM+VHSYQSYLWNHAASMRVQ YG  QVVLGDLVYC     +K 
Sbjct: 389  PGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVQNYGTKQVVLGDLVYCKGDNAEKV 448

Query: 930  MTSSPLECIDSNDIDTHDDCLLEDISVTDLPEVTNTSVKAISEEDIAEEKFTIDDVVLPL 751
                  E  D    D  D    ++IS TDLPE  N  VKA+  ED+    +TIDDVVLPL
Sbjct: 449  TRVVNSEFDDDGCSDAFDSSHFDEISETDLPEERNDPVKALDAEDLLTGNYTIDDVVLPL 508

Query: 750  PGSRISYPLNAIGKIYHDLAEKDGVSLTDSAHNSKEFSLTNMTGAYRKVFQKPKDFEWEL 571
            PGSR  YP N I ++YHD A+KD +SLT+SAH+ KEFS+TNMTG +R+VFQKP DFEWEL
Sbjct: 509  PGSRAIYPTNDIAQVYHDFAKKDAISLTESAHSVKEFSITNMTGGFRRVFQKPIDFEWEL 568

Query: 570  LNYTDINTPLAETDWDKIAKSQAATIVRDEDEKEQIKPQNG--CNTKTDKCDDEINLSAG 397
            L YT+ N PLAETDWDKI KS+ + I+  ED +   + +N   C  +++  +  +NLS  
Sbjct: 569  LTYTEGNIPLAETDWDKITKSKPSNIIGGEDSRNGNEKENSFQCMKQSESFEHNVNLSTD 628

Query: 396  TCDTKSTKDDDI---------RTEESQMALKLSFTLPSSCYATMAIRELLKTSTSVAFHK 244
              +     +  +            E+Q ALKLSFTLP+SCYATMAIRELLKTSTSVAF K
Sbjct: 629  NNEPNGVTEIGLPQVEPQFESGAPEAQRALKLSFTLPASCYATMAIRELLKTSTSVAFQK 688

Query: 243  ALS 235
             L+
Sbjct: 689  TLN 691


>ref|XP_002512230.1| tRNA pseudouridine synthase d, putative [Ricinus communis]
            gi|223548191|gb|EEF49682.1| tRNA pseudouridine synthase
            d, putative [Ricinus communis]
          Length = 753

 Score =  597 bits (1540), Expect = e-168
 Identities = 303/491 (61%), Positives = 386/491 (78%), Gaps = 19/491 (3%)
 Frame = -1

Query: 1650 LSKMLGVKPRSFGFSGTKDKRAVTTQRVTVFKQRASRLAALNEKLIGIKVGNFCHVNDGL 1471
            + KMLG++PRSFGF+GTKDKR+V+TQRVTVFKQ ASRLAALN++LIGIKVG+FC+VN+GL
Sbjct: 262  IGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQHASRLAALNDRLIGIKVGDFCYVNEGL 321

Query: 1470 VLGKLQGNRFTITLRSVCAETEDIIRASATSLGQNGFINYFGLQRFGSSSIPTHLIGAAL 1291
            +LG+L GNRFT+TLR V A++ED I+ SA SLG++GFINYFGLQRFGS S+PTHLIGAAL
Sbjct: 322  LLGQLLGNRFTVTLRGVVADSEDTIKGSADSLGRHGFINYFGLQRFGSGSVPTHLIGAAL 381

Query: 1290 LRGEWKAAVGMILDPREGEKDV-------TRNTREYYKQSGDIEGTLRQLPRYLVAERAI 1132
            LRGEWK AV MILDPREG+  +        R  REYYK+S DI+GTLRQLPRYL AERA+
Sbjct: 382  LRGEWKYAVSMILDPREGDILLLVICFMWMRMAREYYKESDDIDGTLRQLPRYLTAERAV 441

Query: 1131 LQCFQKCPGNYLQALLAIPRTLRMMFVHSYQSYLWNHAASMRVQKYGCHQVVLGDLVYCT 952
            LQC +KCPGNYLQAL AIPRTLRMM+VHSYQSYLWNHAASMRVQKYG  QVV+GDLVYC 
Sbjct: 442  LQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVQKYGTDQVVVGDLVYCK 501

Query: 951  EQETDKEMTSSPLECIDSNDIDTHDDCLLEDISVTDLPEVTNTSVK---AISEEDIAEEK 781
              +T++E+ S+   C D +  D +    L++ S TDL E  +T VK   A++ ED++   
Sbjct: 502  GDDTEREIGSANSACEDDDCEDMYGCSNLDETSGTDLSERKDTLVKVEQAVNAEDLSTGN 561

Query: 780  FTIDDVVLPLPGSRISYPLNAIGKIYHDLAEKDGVSLTDSAHNSKEFSLTNMTGAYRKVF 601
            +TI+DV+LP+PGSR+SYP N I K+YHDLAEKD ++L +S H++KEFS+T+MTG+YR+VF
Sbjct: 562  YTINDVILPMPGSRVSYPTNDIAKVYHDLAEKDAINLAESVHSAKEFSITSMTGSYRRVF 621

Query: 600  QKPKDFEWELLNYTDINTPLAETDWDKIAKSQAATIVRDED-EKEQIKPQNGCNTKTDKC 424
            QKP DFEWE+L+YTD  TPLAETD +K+AK+++  + ++E+ +K   K  + C  +    
Sbjct: 622  QKPMDFEWEILSYTDGTTPLAETDMEKLAKAKSIELNKEEETKKNDTKSPSDCMRQPMSS 681

Query: 423  DDEINLSA-----GTCDTKSTKDDDI---RTEESQMALKLSFTLPSSCYATMAIRELLKT 268
             ++++LSA     G  + +  K + +    T  +Q ALKL+FTLP+SCYATMAIRELLKT
Sbjct: 682  GNDLHLSAEYNREGEREVEVAKVEPLYGPNTRGAQTALKLTFTLPASCYATMAIRELLKT 741

Query: 267  STSVAFHKALS 235
            STSVAFHK L+
Sbjct: 742  STSVAFHKTLN 752


>emb|CBI34194.3| unnamed protein product [Vitis vinifera]
          Length = 693

 Score =  595 bits (1534), Expect = e-167
 Identities = 305/483 (63%), Positives = 365/483 (75%), Gaps = 11/483 (2%)
 Frame = -1

Query: 1650 LSKMLGVKPRSFGFSGTKDKRAVTTQRVTVFKQRASRLAALNEKLIGIKVGNFCHVNDGL 1471
            + KMLG++PRSFGF+GTKDKR+V+TQRVTVFKQ A+RLAALNE+LIGIKVG+FCHV +GL
Sbjct: 209  IGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQHANRLAALNERLIGIKVGDFCHVREGL 268

Query: 1470 VLGKLQGNRFTITLRSVCAETEDIIRASATSLGQNGFINYFGLQRFGSSSIPTHLIGAAL 1291
            VLG+L GNRFTITLR V A++E+ I+ASA +LG+ GFINYFGLQRFGS S+PTHLIGAAL
Sbjct: 269  VLGQLLGNRFTITLRGVVADSEETIKASADALGRLGFINYFGLQRFGSGSVPTHLIGAAL 328

Query: 1290 LRGEWKAAVGMILDPREGEKDVTRNTREYYKQSGDIEGTLRQLPRYLVAERAILQCFQKC 1111
            LRGEW+ AV +ILDPREG+  + +  REYYK+S DIEGTLRQ PR+LVAERAILQC +K 
Sbjct: 329  LRGEWETAVSLILDPREGDILLLK-AREYYKESDDIEGTLRQFPRHLVAERAILQCLKKY 387

Query: 1110 PGNYLQALLAIPRTLRMMFVHSYQSYLWNHAASMRVQKYGCHQVVLGDLVYCTEQETDKE 931
            PGNYLQAL AIPRTLRMM+VHSYQSYLWNHAASMRVQ YG  QVVLGDLVYC     +K 
Sbjct: 388  PGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVQNYGTKQVVLGDLVYCKGDNAEKV 447

Query: 930  MTSSPLECIDSNDIDTHDDCLLEDISVTDLPEVTNTSVKAISEEDIAEEKFTIDDVVLPL 751
                  E  D    D  D    ++IS TDLPE  N  VKA+  ED+    +TIDDVVLPL
Sbjct: 448  TRVVNSEFDDDGCSDAFDSSHFDEISETDLPEERNDPVKALDAEDLLTGNYTIDDVVLPL 507

Query: 750  PGSRISYPLNAIGKIYHDLAEKDGVSLTDSAHNSKEFSLTNMTGAYRKVFQKPKDFEWEL 571
            PGSR  YP N I ++YHD A+KD +SLT+SAH+ KEFS+TNMTG +R+VFQKP DFEWEL
Sbjct: 508  PGSRAIYPTNDIAQVYHDFAKKDAISLTESAHSVKEFSITNMTGGFRRVFQKPIDFEWEL 567

Query: 570  LNYTDINTPLAETDWDKIAKSQAATIVRDEDEKEQIKPQNG--CNTKTDKCDDEINLSAG 397
            L YT+ N PLAETDWDKI KS+ + I+  ED +   + +N   C  +++  +  +NLS  
Sbjct: 568  LTYTEGNIPLAETDWDKITKSKPSNIIGGEDSRNGNEKENSFQCMKQSESFEHNVNLSTD 627

Query: 396  TCDTKSTKDDDI---------RTEESQMALKLSFTLPSSCYATMAIRELLKTSTSVAFHK 244
              +     +  +            E+Q ALKLSFTLP+SCYATMAIRELLKTSTSVAF K
Sbjct: 628  NNEPNGVTEIGLPQVEPQFESGAPEAQRALKLSFTLPASCYATMAIRELLKTSTSVAFQK 687

Query: 243  ALS 235
             L+
Sbjct: 688  TLN 690


>ref|XP_004142573.1| PREDICTED: putative pseudouridine synthase C1A4.09-like [Cucumis
            sativus]
          Length = 719

 Score =  586 bits (1511), Expect = e-165
 Identities = 294/477 (61%), Positives = 373/477 (78%), Gaps = 5/477 (1%)
 Frame = -1

Query: 1650 LSKMLGVKPRSFGFSGTKDKRAVTTQRVTVFKQRASRLAALNEKLIGIKVGNFCHVNDGL 1471
            + KMLG++ RSFGF+GTKDKR+++TQRVTVFKQ ASR+AALN++LIGIK+GNF ++ +GL
Sbjct: 248  IGKMLGIQTRSFGFAGTKDKRSISTQRVTVFKQHASRIAALNDRLIGIKLGNFSYIQEGL 307

Query: 1470 VLGKLQGNRFTITLRSVCAETEDIIRASATSLGQNGFINYFGLQRFGSSSIPTHLIGAAL 1291
            +LG+L GNRFTITLR V A +ED+I+ASA +LG++GFINYFGLQRFGS S+PTHL+GA+L
Sbjct: 308  LLGQLLGNRFTITLRGVVANSEDVIKASAEALGRHGFINYFGLQRFGSGSVPTHLVGASL 367

Query: 1290 LRGEWKAAVGMILDPREGEKDVTRNTREYYKQSGDIEGTLRQLPRYLVAERAILQCFQKC 1111
            LRGEWK AV MILDPREG+  +    R+YYK+S DI+GTL+QLPRYLVAERAILQC +KC
Sbjct: 368  LRGEWKGAVNMILDPREGDILLLMRARDYYKESDDIDGTLKQLPRYLVAERAILQCLKKC 427

Query: 1110 PGNYLQALLAIPRTLRMMFVHSYQSYLWNHAASMRVQKYGCHQVVLGDLVYCTEQ--ETD 937
            PGNYLQAL AIPRTLRMM+VHSYQSYLWNHAASMRVQKYG  +VV+GDLVYC E   ET 
Sbjct: 428  PGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVQKYGIDKVVVGDLVYCKENHTETA 487

Query: 936  KEMTSSPLECIDSNDIDTHDDCLLEDISVTDLPEVTNTSVKAISEEDIAEEKFTIDDVVL 757
                S   E  D  D +++D C LE++    LP   +  VKA++  D+    FTIDDVVL
Sbjct: 488  AVQNSEEYEDEDCGDANSYDSCHLEEVCKLGLPTERHKLVKAVTAGDVLSGNFTIDDVVL 547

Query: 756  PLPGSRISYPLNAIGKIYHDLAEKDGVSLTDSAHNSKEFSLTNMTGAYRKVFQKPKDFEW 577
            PLPGSR+ YP N I ++Y+DLA KD +SLT+S HN KEFS+T+MTG+YR+VFQ+PKD+EW
Sbjct: 548  PLPGSRVLYPTNDIAEVYNDLATKDSISLTNSVHNVKEFSITSMTGSYRRVFQRPKDYEW 607

Query: 576  ELLNYTDINTPLAETDWDKIAKSQAATIVRDEDEKEQIKPQNGCNTKTDK---CDDEINL 406
            EL++Y D N PLA++D   + KSQ+  I ++E   ++ K ++  ++ TD+   C   I L
Sbjct: 608  ELISYVDRNLPLAQSDLHNLLKSQSVEISKEEKIADKSKNEDSLDS-TDQSVCCKKNIQL 666

Query: 405  SAGTCDTKSTKDDDIRTEESQMALKLSFTLPSSCYATMAIRELLKTSTSVAFHKALS 235
             AG  + ++ +     T++ QMALKLSFTLP+S YATMAIRELLKTSTSVAFHK L+
Sbjct: 667  EAGGKENENGQG----TQDPQMALKLSFTLPASSYATMAIRELLKTSTSVAFHKTLN 719


>ref|NP_187133.3| pseudouridine synthase [Arabidopsis thaliana]
            gi|52354299|gb|AAU44470.1| hypothetical protein AT3G04820
            [Arabidopsis thaliana] gi|61742699|gb|AAX55170.1|
            hypothetical protein At3g04820 [Arabidopsis thaliana]
            gi|332640619|gb|AEE74140.1| pseudouridine synthase
            [Arabidopsis thaliana]
          Length = 715

 Score =  567 bits (1460), Expect = e-159
 Identities = 291/473 (61%), Positives = 362/473 (76%), Gaps = 1/473 (0%)
 Frame = -1

Query: 1650 LSKMLGVKPRSFGFSGTKDKRAVTTQRVTVFKQRASRLAALNEKLIGIKVGNFCHVNDGL 1471
            + KMLGV+P+SFGFSGTKDKR+V+TQRVTVFKQ+AS+LAALN++L GIKVG+FC+V +GL
Sbjct: 247  IGKMLGVQPKSFGFSGTKDKRSVSTQRVTVFKQQASKLAALNKRLFGIKVGDFCNVKEGL 306

Query: 1470 VLGKLQGNRFTITLRSVCAETEDIIRASATSLGQNGFINYFGLQRFGSSSIPTHLIGAAL 1291
            +LG+L GNRFTITLR V A++E+ I+ SA SLG++GFINYFGLQRFGS S+PTH +GAAL
Sbjct: 307  LLGQLMGNRFTITLRGVVADSEETIKQSAESLGKDGFINYFGLQRFGSGSVPTHHVGAAL 366

Query: 1290 LRGEWKAAVGMILDPREGEKDVTRNTREYYKQSGDIEGTLRQLPRYLVAERAILQCFQKC 1111
            L+GEWK AV MILDPRE E+ V  + REYYK++GDI+GTLRQLPRYLVAERAILQC +KC
Sbjct: 367  LKGEWKDAVDMILDPRETERHVVNDAREYYKETGDIDGTLRQLPRYLVAERAILQCLKKC 426

Query: 1110 PGNYLQALLAIPRTLRMMFVHSYQSYLWNHAASMRVQKYGCHQVVLGDLVYCTEQETDKE 931
            PGNYLQAL  IPRTLRMM+VHSYQSYLWN+AAS+RV+ YG  QVVLGDLV  T+ +  K 
Sbjct: 427  PGNYLQALKGIPRTLRMMYVHSYQSYLWNNAASLRVKNYGTSQVVLGDLV-STKVDAAKR 485

Query: 930  MTSSPLECIDSNDIDTHDDCLLEDISVTDLPEVTNTSVKAISEEDIAEEKFTIDDVVLPL 751
            M  S     + +  +  D   ++D +V DLP   +  VK +S ED+    ++  D+VLPL
Sbjct: 486  MVDSLTSEHNESSEEALDCDQVDDTAVVDLPAERSDLVKVVSIEDLEAGTYSTSDIVLPL 545

Query: 750  PGSRISYPLNAIGKIYHDLAEKDGVSLTDSAHNSKEFSLTNMTGAYRKVFQKPKDFEWEL 571
            PGSR+ YP N I +IYHDLA+KDG+SLT+S H  KEFS+T+MTG YR+VFQKP DFEWEL
Sbjct: 546  PGSRVIYPSNDIAEIYHDLAKKDGISLTESIHGVKEFSITSMTGGYRRVFQKPIDFEWEL 605

Query: 570  LNYTDINTPLAETDWDKIAKSQAATIVRDEDEKEQIKPQNGCNTKTDKCDDEINLSAGTC 391
            L YTD N PLAETD D+I  ++    V   +E E    ++  N        E NL   T 
Sbjct: 606  LTYTDSNKPLAETDLDRIPMNKPVEKVGSTEEIEDESMKSDTNPHD---SGETNLKDQTD 662

Query: 390  DTKSTKD-DDIRTEESQMALKLSFTLPSSCYATMAIRELLKTSTSVAFHKALS 235
              ++ KD  +  +E++QMALK++ TLPSSCYATMAIRELLKTSTSVA+HK L+
Sbjct: 663  SNEAEKDTGNPDSEQTQMALKMALTLPSSCYATMAIRELLKTSTSVAYHKTLN 715