BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00004823
         (702 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_187644.1| transcription initiation factor IIB-2 [Arabidop...   186   6e-62
ref|XP_002882661.1| transcription initiation factor IIB-2 [Arabi...   186   6e-62
ref|XP_003519077.1| PREDICTED: transcription initiation factor I...   184   2e-61
ref|NP_001238343.1| transcription initiation factor IIB [Glycine...   183   5e-61
ref|XP_002534470.1| transcription initiation factor iib, putativ...   184   5e-61

>ref|NP_187644.1| transcription initiation factor IIB-2 [Arabidopsis thaliana]
           gi|21363045|sp|Q9SS44.1|TF2B2_ARATH RecName:
           Full=Transcription initiation factor IIB-2; AltName:
           Full=General transcription factor TFIIB-2;
           Short=AtTFIIB2 gi|6056193|gb|AAF02810.1|AC009400_6
           transcription initiation factor IIB (TFIIB) [Arabidopsis
           thaliana] gi|15215784|gb|AAK91437.1| AT3g10330/F14P13_7
           [Arabidopsis thaliana] gi|16974427|gb|AAL31139.1|
           AT3g10330/F14P13_7 [Arabidopsis thaliana]
           gi|21593436|gb|AAM65403.1| transcription initiation
           factor IIB (TFIIB) [Arabidopsis thaliana]
           gi|39545880|gb|AAR28003.1| TFIIB2 [Arabidopsis thaliana]
           gi|332641371|gb|AEE74892.1| transcription initiation
           factor IIB-2 [Arabidopsis thaliana]
          Length = 312

 Score =  186 bits (472), Expect(2) = 6e-62
 Identities = 89/121 (73%), Positives = 104/121 (85%), Gaps = 2/121 (1%)
 Frame = -2

Query: 563 MSDTYCSDCKRNTEVVFDHAAGDTVCSECGLVLEARSIDETSEWRTFADESGDHDPNRVG 384
           MSD +CSDCKR+TEVVFDH+AGDTVCSECGLVLE+ SIDETSEWRTFA+ESGD+DP RVG
Sbjct: 1   MSDAFCSDCKRHTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 383 GPVNPLLGDGALTTVISR--GANGSNVDSSLARLQNRGGDPDRAIVLAFKTISNMADRLS 210
           GP NPLL DG LTTVIS+  G++G  + SSL R QNRG +PDR +++AFKTI+ MADRL 
Sbjct: 61  GPTNPLLADGGLTTVISKPNGSSGDFLSSSLGRWQNRGSNPDRGLIVAFKTIATMADRLG 120

Query: 209 L 207
           L
Sbjct: 121 L 121



 Score = 77.8 bits (190), Expect(2) = 6e-62
 Identities = 36/46 (78%), Positives = 42/46 (91%)
 Frame = -3

Query: 139 DRLSLVTTIKDRASEIYKRLEDQKCTRGRNLEALVAACIYIACRQE 2
           DRL LV TIKDRA+EIYKR+EDQK +RGRN +AL+AAC+YIACRQE
Sbjct: 117 DRLGLVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQE 162


>ref|XP_002882661.1| transcription initiation factor IIB-2 [Arabidopsis lyrata subsp.
           lyrata] gi|297328501|gb|EFH58920.1| transcription
           initiation factor IIB-2 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 312

 Score =  186 bits (472), Expect(2) = 6e-62
 Identities = 89/121 (73%), Positives = 104/121 (85%), Gaps = 2/121 (1%)
 Frame = -2

Query: 563 MSDTYCSDCKRNTEVVFDHAAGDTVCSECGLVLEARSIDETSEWRTFADESGDHDPNRVG 384
           MSD +CSDCKR+TEVVFDH+AGDTVCSECGLVLE+ SIDETSEWRTFA+ESGD+DP RVG
Sbjct: 1   MSDAFCSDCKRHTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 383 GPVNPLLGDGALTTVISR--GANGSNVDSSLARLQNRGGDPDRAIVLAFKTISNMADRLS 210
           GP NPLL DG LTTVIS+  G++G  + SSL R QNRG +PDR +++AFKTI+ MADRL 
Sbjct: 61  GPTNPLLADGGLTTVISKPNGSSGDFLSSSLGRWQNRGSNPDRGLIVAFKTIATMADRLG 120

Query: 209 L 207
           L
Sbjct: 121 L 121



 Score = 77.8 bits (190), Expect(2) = 6e-62
 Identities = 36/46 (78%), Positives = 42/46 (91%)
 Frame = -3

Query: 139 DRLSLVTTIKDRASEIYKRLEDQKCTRGRNLEALVAACIYIACRQE 2
           DRL LV TIKDRA+EIYKR+EDQK +RGRN +AL+AAC+YIACRQE
Sbjct: 117 DRLGLVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQE 162


>ref|XP_003519077.1| PREDICTED: transcription initiation factor IIB-like [Glycine max]
          Length = 314

 Score =  184 bits (467), Expect(2) = 2e-61
 Identities = 88/123 (71%), Positives = 103/123 (83%), Gaps = 4/123 (3%)
 Frame = -2

Query: 563 MSDTYCSDCKRNTEVVFDHAAGDTVCSECGLVLEARSIDETSEWRTFADESGDHDPNRVG 384
           MSD +CSDCKR TEVVFDH+AGDTVCSECGLVLE+ SIDETSEWRTFA+ESGD+DPNRVG
Sbjct: 1   MSDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPNRVG 60

Query: 383 GPVNPLLGDGALTTVISR----GANGSNVDSSLARLQNRGGDPDRAIVLAFKTISNMADR 216
           GP NPLL DG L+TVI++    G  G  + SSL R QNRG +PDRA+++AFKTI+ M+DR
Sbjct: 61  GPSNPLLTDGGLSTVIAKPNGGGGGGEFLSSSLGRWQNRGSNPDRALIIAFKTIATMSDR 120

Query: 215 LSL 207
           L L
Sbjct: 121 LGL 123



 Score = 77.8 bits (190), Expect(2) = 2e-61
 Identities = 36/46 (78%), Positives = 42/46 (91%)
 Frame = -3

Query: 139 DRLSLVTTIKDRASEIYKRLEDQKCTRGRNLEALVAACIYIACRQE 2
           DRL LV TIKDRA+EIYKR+EDQK +RGRN +AL+AAC+YIACRQE
Sbjct: 119 DRLGLVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQE 164


>ref|NP_001238343.1| transcription initiation factor IIB [Glycine max]
           gi|1351222|sp|P48513.1|TF2B_SOYBN RecName:
           Full=Transcription initiation factor IIB; AltName:
           Full=General transcription factor TFIIB
           gi|945087|gb|AAB09756.1| transcription factor TFIIB
           [Glycine max]
          Length = 313

 Score =  183 bits (464), Expect(2) = 5e-61
 Identities = 88/122 (72%), Positives = 102/122 (83%), Gaps = 3/122 (2%)
 Frame = -2

Query: 563 MSDTYCSDCKRNTEVVFDHAAGDTVCSECGLVLEARSIDETSEWRTFADESGDHDPNRVG 384
           MSD +CSDCKR TEVVFDH+AGDTVCSECGLVLE+ SIDETSEWRTFA+ESGD+DPNRVG
Sbjct: 1   MSDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPNRVG 60

Query: 383 GPVNPLLGDGALTTVISR---GANGSNVDSSLARLQNRGGDPDRAIVLAFKTISNMADRL 213
           GP NPLL DG L+TVI++   G  G  + SSL R QNRG +PDRA++ AFKTI+ M+DRL
Sbjct: 61  GPSNPLLTDGGLSTVIAKPNGGGGGEFLSSSLGRWQNRGSNPDRALIQAFKTIATMSDRL 120

Query: 212 SL 207
            L
Sbjct: 121 GL 122



 Score = 77.8 bits (190), Expect(2) = 5e-61
 Identities = 36/46 (78%), Positives = 42/46 (91%)
 Frame = -3

Query: 139 DRLSLVTTIKDRASEIYKRLEDQKCTRGRNLEALVAACIYIACRQE 2
           DRL LV TIKDRA+EIYKR+EDQK +RGRN +AL+AAC+YIACRQE
Sbjct: 118 DRLGLVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQE 163


>ref|XP_002534470.1| transcription initiation factor iib, putative [Ricinus communis]
           gi|223525233|gb|EEF27913.1| transcription initiation
           factor iib, putative [Ricinus communis]
          Length = 312

 Score =  184 bits (467), Expect(2) = 5e-61
 Identities = 88/121 (72%), Positives = 102/121 (84%), Gaps = 2/121 (1%)
 Frame = -2

Query: 563 MSDTYCSDCKRNTEVVFDHAAGDTVCSECGLVLEARSIDETSEWRTFADESGDHDPNRVG 384
           M D YCSDCKR TEVVFDH+AGDTVCSECGLVLE+ SIDETSEWRTFA+ESGD+DP RVG
Sbjct: 1   MGDAYCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 383 GPVNPLLGDGALTTVISR--GANGSNVDSSLARLQNRGGDPDRAIVLAFKTISNMADRLS 210
           GP NPLL DG L+TVI++  GA+G  + SSL R QNRG +PDR ++LAFKTI+ M+DRL 
Sbjct: 61  GPTNPLLADGGLSTVIAKPNGASGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120

Query: 209 L 207
           L
Sbjct: 121 L 121



 Score = 76.6 bits (187), Expect(2) = 5e-61
 Identities = 35/46 (76%), Positives = 42/46 (91%)
 Frame = -3

Query: 139 DRLSLVTTIKDRASEIYKRLEDQKCTRGRNLEALVAACIYIACRQE 2
           DRL LV TIKDRA+EIYK++EDQK +RGRN +AL+AAC+YIACRQE
Sbjct: 117 DRLGLVATIKDRANEIYKKVEDQKSSRGRNQDALLAACLYIACRQE 162