BLASTX nr result

ID: Scutellaria23_contig00004821 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00004821
         (474 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317728.1| predicted protein [Populus trichocarpa] gi|2...    84   2e-14
dbj|BAB01310.1| unnamed protein product [Arabidopsis thaliana]         82   3e-14
ref|NP_188629.1| E3 ubiquitin-protein ligase RING1-like protein ...    82   5e-14
ref|XP_002883213.1| zinc finger family protein [Arabidopsis lyra...    82   6e-14
emb|CBI35278.3| unnamed protein product [Vitis vinifera]               78   7e-13

>ref|XP_002317728.1| predicted protein [Populus trichocarpa] gi|222858401|gb|EEE95948.1|
           predicted protein [Populus trichocarpa]
          Length = 323

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 48/139 (34%), Positives = 65/139 (46%), Gaps = 12/139 (8%)
 Frame = -3

Query: 382 GGPQMYFCHQCEHTVTISPSPVGDIFCPSCNSGFVEEFQNPNP--NPTIXXXXXXXXXXX 209
           G PQ+YFC+QC+ TVTI+PSP  D+ CP+C  GF+EE ++PNP  NP             
Sbjct: 8   GVPQLYFCYQCDRTVTITPSPTSDLSCPNCQEGFLEECESPNPSSNPVDSGLGPAILLDE 67

Query: 208 XXXXXXXXSANPNPVSRSGLFGESSIG-----PDSFDPATYXXXXXXXXXXSGIDYQFVI 44
                   +  P   + S     SS       PD F+P  +           G + QFVI
Sbjct: 68  FASIFGGMAPTPRSSNNSTTTNSSSASPLFQDPDGFNPFAFLQNYLQTMRAGGANIQFVI 127

Query: 43  EDHP-----SASGFSLPAN 2
           E++        +GF LPAN
Sbjct: 128 ENNSGMGGMDTTGFRLPAN 146


>dbj|BAB01310.1| unnamed protein product [Arabidopsis thaliana]
          Length = 386

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 53/166 (31%), Positives = 78/166 (46%), Gaps = 20/166 (12%)
 Frame = -3

Query: 439 FGKSLQCSTMSSS-AVTVADGGPQMYFCHQCEHTVTISPSPVGDIFCPSCNSGFVEEFQN 263
           F +S+  S ++S+ +   A    +M+FC+QC  TVTIS S   D FCP CN GF+EE+++
Sbjct: 54  FAESVMSSGVNSTGSAAAAPEVDKMFFCYQCNQTVTISISSSADPFCPICNQGFLEEYED 113

Query: 262 PNPNPTI---------XXXXXXXXXXXXXXXXXXXSANPNPVSRSGLFGES--------- 137
           PNPN ++                            +A P+ +    LFG S         
Sbjct: 114 PNPNQSLNFNPNSSDSFFPMADPFSTLLPLIFGSSAAAPSGMDFMSLFGPSMQPQARSTQ 173

Query: 136 -SIGPDSFDPATYXXXXXXXXXXSGIDYQFVIEDHPSASGFSLPAN 2
            +   D+FDP T+          SG  ++FVIE+HPS  G  +P N
Sbjct: 174 QNPQSDAFDPFTFLQNHLQTLRSSGTHFEFVIENHPSDPGNRMPGN 219


>ref|NP_188629.1| E3 ubiquitin-protein ligase RING1-like protein [Arabidopsis
           thaliana] gi|75301658|sp|Q8LPN7.1|RNG1L_ARATH RecName:
           Full=E3 ubiquitin-protein ligase RING1-like; AltName:
           Full=RING finger protein 1 gi|20465263|gb|AAM19951.1|
           AT3g19950/MPN9_19 [Arabidopsis thaliana]
           gi|23308365|gb|AAN18152.1| At3g19950/MPN9_19
           [Arabidopsis thaliana] gi|332642790|gb|AEE76311.1| E3
           ubiquitin-protein ligase RING1-like protein [Arabidopsis
           thaliana]
          Length = 328

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 53/158 (33%), Positives = 74/158 (46%), Gaps = 19/158 (12%)
 Frame = -3

Query: 418 STMSSSAVTVADGGPQMYFCHQCEHTVTISPSPVGDIFCPSCNSGFVEEFQNPNPNPTI- 242
           ST S++A    D   +M+FC+QC  TVTIS S   D FCP CN GF+EE+++PNPN ++ 
Sbjct: 7   STGSAAAAPEVD---KMFFCYQCNQTVTISISSSADPFCPICNQGFLEEYEDPNPNQSLN 63

Query: 241 --------XXXXXXXXXXXXXXXXXXXSANPNPVSRSGLFGES----------SIGPDSF 116
                                      +A P+ +    LFG S          +   D+F
Sbjct: 64  FNPNSSDSFFPMADPFSTLLPLIFGSSAAAPSGMDFMSLFGPSMQPQARSTQQNPQSDAF 123

Query: 115 DPATYXXXXXXXXXXSGIDYQFVIEDHPSASGFSLPAN 2
           DP T+          SG  ++FVIE+HPS  G  +P N
Sbjct: 124 DPFTFLQNHLQTLRSSGTHFEFVIENHPSDPGNRMPGN 161


>ref|XP_002883213.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297329053|gb|EFH59472.1| zinc finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 330

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 51/152 (33%), Positives = 66/152 (43%), Gaps = 28/152 (18%)
 Frame = -3

Query: 373 QMYFCHQCEHTVTISPSPVGDIFCPSCNSGFVEEFQNPNPNPTIXXXXXXXXXXXXXXXX 194
           +M+FC+QC  TVTIS S   D FCP CN GF+EE+++PNPNP++                
Sbjct: 19  KMFFCYQCNRTVTISISSSADPFCPICNQGFLEEYEDPNPNPSL-------NFNPNSVDS 71

Query: 193 XXXSANPNPVSRSGLFGESSIGP----------------------------DSFDPATYX 98
               A+P       LFG S+  P                            D+FDP T+ 
Sbjct: 72  LFPMADPFSTLLPLLFGSSAASPSGIDLMSSSFFAPSMQPQARSTQQNPQSDAFDPFTFL 131

Query: 97  XXXXXXXXXSGIDYQFVIEDHPSASGFSLPAN 2
                    SG   QFVIE+HPS  G  +P N
Sbjct: 132 QNHLQNLRSSGTHVQFVIENHPSDLGNRMPGN 163


>emb|CBI35278.3| unnamed protein product [Vitis vinifera]
          Length = 416

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 53/166 (31%), Positives = 64/166 (38%), Gaps = 28/166 (16%)
 Frame = -3

Query: 415 TMSSSAVTVADGG---------PQMYFCHQCEHTVTISPSPVGDIFCPSCNSGFVEEFQN 263
           TMS S  +   GG         PQ YFC+QC  TV+I+PSP  D  CP CN GF+EE +N
Sbjct: 44  TMSLSGFSGGSGGGGPGGGSAAPQSYFCYQCNLTVSITPSPTSDPLCPHCNDGFLEEVEN 103

Query: 262 PNPNPTIXXXXXXXXXXXXXXXXXXXSAN-------------------PNPVSRSGLFGE 140
           PNPNP                      A                     N V   GLFG 
Sbjct: 104 PNPNPIPVPIPNPFLGFSDLPSLSAAGATATAFPPLVFSTAAGGSIDLQNSVDFPGLFGA 163

Query: 139 SSIGPDSFDPATYXXXXXXXXXXSGIDYQFVIEDHPSASGFSLPAN 2
               PD+F P  +           G + QFVI+ +     F L  N
Sbjct: 164 D---PDAFHPFAFLQNYLQTLRAGGTNVQFVIDGNSPEGTFRLSPN 206


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