BLASTX nr result

ID: Scutellaria23_contig00004732 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00004732
         (849 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272223.1| PREDICTED: uncharacterized protein LOC100245...   103   4e-20
ref|XP_002518926.1| RNA-binding protein, putative [Ricinus commu...   102   1e-19
ref|XP_003602357.1| Splicing factor, arginine/serine-rich [Medic...   101   2e-19
ref|XP_003602361.1| Polyadenylate-binding protein [Medicago trun...   100   4e-19
gb|AFK34352.1| unknown [Medicago truncatula]                          100   7e-19

>ref|XP_002272223.1| PREDICTED: uncharacterized protein LOC100245327 [Vitis vinifera]
           gi|302143972|emb|CBI23077.3| unnamed protein product
           [Vitis vinifera]
          Length = 361

 Score =  103 bits (258), Expect = 4e-20
 Identities = 86/215 (40%), Positives = 115/215 (53%), Gaps = 9/215 (4%)
 Frame = -3

Query: 622 MAVVENAGVNAIASSNRDTQQNDVVATDHHHQNQQSTKAAVNN--QKSTK------PADQ 467
           MAVVENAG N + SS+ +++  D   T+   Q+Q S    + N  QK+T       P D+
Sbjct: 1   MAVVENAG-NKVGSSSANSESAD---TNDFGQSQPSNHTVMQNLQQKNTNSKPILLPNDE 56

Query: 466 NFHLMQQKIANGHHQLQHHPINGNGVEK-KIXXXXXXXXGFNRDMRDLEEMLSKLNPLAE 290
           N++   QKI     +        NGV K ++            D+RDLE++LSKLNP+AE
Sbjct: 57  NYY--SQKIPQFQQKA-----GSNGVAKIQMVGSFGRDREDGGDIRDLEDLLSKLNPMAE 109

Query: 289 EFVPPSHSAYASGGLHKLLXXXXXXXXXXXXXXXXXXXXNGFLMQQHVNSGVPTGNSFRR 110
           EFVPPS    A+G                          N F++Q   N G   GN+ RR
Sbjct: 110 EFVPPS---LANG--------------HGWSAGAAFGYTNNFVLQ--ANFGNANGNAGRR 150

Query: 109 KKNGSMNGKRRMNTRTSMAQREDVIRRTVYVSDID 5
           K+N + N KRR+N+RTSMAQRE+VI+RTVYVSDID
Sbjct: 151 KRN-NYNQKRRINSRTSMAQREEVIKRTVYVSDID 184


>ref|XP_002518926.1| RNA-binding protein, putative [Ricinus communis]
           gi|223541913|gb|EEF43459.1| RNA-binding protein,
           putative [Ricinus communis]
          Length = 379

 Score =  102 bits (253), Expect = 1e-19
 Identities = 73/220 (33%), Positives = 109/220 (49%), Gaps = 14/220 (6%)
 Frame = -3

Query: 622 MAVVENAGVN--------AIASSNRDTQQNDVVATDHHHQNQQST----KAAVNNQKSTK 479
           MA+VENA V+        + +SS+ D+  +   + D  H N  ++    ++ + N  S +
Sbjct: 1   MAIVENASVDLGISIGSASSSSSSLDSSVSSASSNDQDHSNHNNSHDHGRSLIENSISIQ 60

Query: 478 PADQNFHLMQQKIANGHHQLQHHPINGNGVEKKIXXXXXXXXGFNRDMRDLEEMLSKLNP 299
           P      +          QL HH    +G                RD+R+L+E+ SKLNP
Sbjct: 61  PLYMKAQVQSPPPNLQVAQLHHHHQRSSG-----------GGDLQRDIRELQELFSKLNP 109

Query: 298 LAEEFVPPS--HSAYASGGLHKLLXXXXXXXXXXXXXXXXXXXXNGFLMQQHVNSGVPTG 125
           +AEEFVPPS  ++  ++  +H L                       F++     +G   G
Sbjct: 110 MAEEFVPPSLANNKISNNYIHGL------NGLNVGFYTNNNNYDPAFMLTNASRNGQLNG 163

Query: 124 NSFRRKKNGSMNGKRRMNTRTSMAQREDVIRRTVYVSDID 5
           ++ RRKKN +  GKRR+N+RTSMAQRE++IRRTVYVSDID
Sbjct: 164 SAARRKKNYNQ-GKRRLNSRTSMAQREEIIRRTVYVSDID 202


>ref|XP_003602357.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
           gi|355491405|gb|AES72608.1| Splicing factor,
           arginine/serine-rich [Medicago truncatula]
          Length = 384

 Score =  101 bits (251), Expect = 2e-19
 Identities = 82/220 (37%), Positives = 103/220 (46%), Gaps = 14/220 (6%)
 Frame = -3

Query: 622 MAVVENAGVNAIASS-NRDTQQNDVVATDHHH--QNQQSTKAAVNNQKSTKPADQN---- 464
           MAV EN G    +SS N D   N  V++D     +++  T   VNN        QN    
Sbjct: 1   MAVAENVGAKIGSSSQNLDNNNNHAVSSDSTEVEKSKPRTDQDVNNNSVFNHQHQNGNYS 60

Query: 463 --FHLMQQKIANGHHQLQHHPINGNGVEKKIXXXXXXXXGFNRDMRDLEEMLSKLNPLAE 290
              H M Q  ANG    Q    N   V   +         F R+MRDLEE+LSKLNP+AE
Sbjct: 61  FKTHQMGQMHANGVQNHQFVVNNDGYVMNGLRNGENGGESFKREMRDLEELLSKLNPMAE 120

Query: 289 EFVPPS----HSAYASGGLHKLLXXXXXXXXXXXXXXXXXXXXNGFLMQQHVNSGVPTGN 122
           EFVPPS    H   A+G                          N  L+  + N+    G 
Sbjct: 121 EFVPPSLTNNHGYLAAG-----------------PAAGFGYPNNFILLNNYANA---NGQ 160

Query: 121 SFRRKKNG-SMNGKRRMNTRTSMAQREDVIRRTVYVSDID 5
           + RR+KNG + NGKRR N +  M +RE++IRRTVYVSDID
Sbjct: 161 TNRRRKNGYTTNGKRRANHKVDMEKREEMIRRTVYVSDID 200


>ref|XP_003602361.1| Polyadenylate-binding protein [Medicago truncatula]
           gi|355491409|gb|AES72612.1| Polyadenylate-binding
           protein [Medicago truncatula]
          Length = 384

 Score =  100 bits (249), Expect = 4e-19
 Identities = 80/227 (35%), Positives = 109/227 (48%), Gaps = 21/227 (9%)
 Frame = -3

Query: 622 MAVVENAGVNAIASSNRDTQQNDVVATDHHHQNQQSTKAAVNNQKSTKPADQNF-----H 458
           MAV EN G    +SS  +   N VV++D     ++S K   +   +T   + N      H
Sbjct: 1   MAVAENVGTKIDSSS--ENLDNSVVSSDSTEVVEKS-KPKTDQNLNTNSVNTNVVGVINH 57

Query: 457 LMQQKIANGHHQLQHHPIN---GNGVEKKIXXXXXXXXG---FNRDMRDLEEMLSKLNPL 296
             Q  + NG+H    H ++   GNGV+ +         G   F R+MRDLEE+LSKLNP+
Sbjct: 58  QQQDSVPNGNHGFIAHQMSQMHGNGVQNQHLVDGYGGNGGESFKREMRDLEELLSKLNPM 117

Query: 295 AEEFVPPS-----HSAYASGGLHKLLXXXXXXXXXXXXXXXXXXXXNGFLMQQH-----V 146
           AEEFVPPS     H   A+G                          N F++Q +      
Sbjct: 118 AEEFVPPSLVTNYHGYLAAG-----------------PNAGFGYPNNNFMLQNNFGNANA 160

Query: 145 NSGVPTGNSFRRKKNGSMNGKRRMNTRTSMAQREDVIRRTVYVSDID 5
           N+    G   RR+KNG  N KRR+  +  M +RE++IRRTVYVSDID
Sbjct: 161 NATANNGQINRRRKNGYNNAKRRVYHKMDMEKREEMIRRTVYVSDID 207


>gb|AFK34352.1| unknown [Medicago truncatula]
          Length = 376

 Score = 99.8 bits (247), Expect = 7e-19
 Identities = 81/220 (36%), Positives = 102/220 (46%), Gaps = 14/220 (6%)
 Frame = -3

Query: 622 MAVVENAGVNAIASS-NRDTQQNDVVATDHHH--QNQQSTKAAVNNQKSTKPADQN---- 464
           MAV EN G    +SS N D   N  V++D     +++  T   VNN        QN    
Sbjct: 1   MAVAENVGAKIGSSSQNLDNNNNHAVSSDSTEVEKSKPRTDQDVNNNSVFNHQHQNGNYS 60

Query: 463 --FHLMQQKIANGHHQLQHHPINGNGVEKKIXXXXXXXXGFNRDMRDLEEMLSKLNPLAE 290
              H M Q  ANG    Q    N   V   +         F R+MRDLEE+LSKLNP+AE
Sbjct: 61  FKTHQMGQMHANGVQNHQFVVNNDGYVMNGLRNGENGGESFKREMRDLEELLSKLNPMAE 120

Query: 289 EFVPPS----HSAYASGGLHKLLXXXXXXXXXXXXXXXXXXXXNGFLMQQHVNSGVPTGN 122
           EFVPPS    H   A+G                          N  L+  + N+    G 
Sbjct: 121 EFVPPSLTNNHGYLAAG-----------------PAAGFGYPNNFILLNNYANA---NGQ 160

Query: 121 SFRRKKNG-SMNGKRRMNTRTSMAQREDVIRRTVYVSDID 5
           + RR+KNG + NGKRR N +  M +RE++IRRTVY SDID
Sbjct: 161 TNRRRKNGYTTNGKRRANHKVDMEKREEMIRRTVYASDID 200


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