BLASTX nr result

ID: Scutellaria23_contig00004682 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00004682
         (995 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279082.1| PREDICTED: 60S acidic ribosomal protein P1-1...   110   7e-22
ref|XP_002524416.1| 60S acidic ribosomal protein P1, putative [R...   107   6e-21
ref|XP_003602368.1| 60S acidic ribosomal protein P1 [Medicago tr...   106   1e-20
gb|ABR17957.1| unknown [Picea sitchensis]                             105   2e-20
ref|NP_197839.1| large subunit ribosomal protein LP1 [Arabidopsi...   104   3e-20

>ref|XP_002279082.1| PREDICTED: 60S acidic ribosomal protein P1-1 isoform 1 [Vitis
           vinifera] gi|297742458|emb|CBI34607.3| unnamed protein
           product [Vitis vinifera]
          Length = 111

 Score =  110 bits (274), Expect = 7e-22
 Identities = 59/111 (53%), Positives = 67/111 (60%)
 Frame = -3

Query: 876 MSVGELGCTYAALILHDDGIPITAEKISTLLKAANLTVESYWPGLFAKLCEKKNIDDLIV 697
           MS+GE  CT A LILHDDGIP+TAEKISTLLKAAN++VESYWPGLFAKL EKK++DDLI+
Sbjct: 1   MSIGEQACTLAILILHDDGIPVTAEKISTLLKAANVSVESYWPGLFAKLVEKKSVDDLIM 60

Query: 696 NVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 544
           NV                                      SD+DMGF LFD
Sbjct: 61  NVGSGGGGAPMAVATMAGGGDAAGAAAPPPEEKKEEPKEESDEDMGFSLFD 111


>ref|XP_002524416.1| 60S acidic ribosomal protein P1, putative [Ricinus communis]
           gi|223536300|gb|EEF37951.1| 60S acidic ribosomal protein
           P1, putative [Ricinus communis]
          Length = 110

 Score =  107 bits (266), Expect = 6e-21
 Identities = 58/111 (52%), Positives = 66/111 (59%)
 Frame = -3

Query: 876 MSVGELGCTYAALILHDDGIPITAEKISTLLKAANLTVESYWPGLFAKLCEKKNIDDLIV 697
           M+ GEL CTYA LILHDDGIP+T+EKI+TL+KAAN+ VESYWP LFAKL EKKNIDDL++
Sbjct: 1   MAAGELACTYATLILHDDGIPVTSEKIATLVKAANVAVESYWPSLFAKLAEKKNIDDLVM 60

Query: 696 NVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 544
           NV                                      SDDDMGF LFD
Sbjct: 61  NV-GSGGGAAPVAVSAPAAGAGAAAAAPAVEEKKEEPKEESDDDMGFSLFD 110


>ref|XP_003602368.1| 60S acidic ribosomal protein P1 [Medicago truncatula]
           gi|355491416|gb|AES72619.1| 60S acidic ribosomal protein
           P1 [Medicago truncatula] gi|388507442|gb|AFK41787.1|
           unknown [Medicago truncatula]
          Length = 110

 Score =  106 bits (264), Expect = 1e-20
 Identities = 59/111 (53%), Positives = 64/111 (57%)
 Frame = -3

Query: 876 MSVGELGCTYAALILHDDGIPITAEKISTLLKAANLTVESYWPGLFAKLCEKKNIDDLIV 697
           MS GELGC YA LILHDDGIPITAEKI TLLKAAN+TVESYWP LFAKL + KN+DDL++
Sbjct: 1   MSSGELGCIYATLILHDDGIPITAEKIGTLLKAANVTVESYWPSLFAKLAQSKNVDDLVL 60

Query: 696 NVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 544
           N                                       SDDDMGF LFD
Sbjct: 61  N-SGAVGGAAVAVSAPAAGGGTAAAAEPAAVEKKEEAKEESDDDMGFSLFD 110


>gb|ABR17957.1| unknown [Picea sitchensis]
          Length = 113

 Score =  105 bits (261), Expect = 2e-20
 Identities = 49/62 (79%), Positives = 56/62 (90%)
 Frame = -3

Query: 876 MSVGELGCTYAALILHDDGIPITAEKISTLLKAANLTVESYWPGLFAKLCEKKNIDDLIV 697
           MSV E+ CTYAAL+LHDD IPITAEKISTL+KAAN+ +ESYWPGLFAKL EK+NI+DLI 
Sbjct: 1   MSVSEVACTYAALVLHDDNIPITAEKISTLVKAANVQIESYWPGLFAKLMEKRNIEDLIS 60

Query: 696 NV 691
           NV
Sbjct: 61  NV 62


>ref|NP_197839.1| large subunit ribosomal protein LP1 [Arabidopsis thaliana]
           gi|10177851|dbj|BAB11203.1| 60s acidic ribosomal protein
           P1 [Arabidopsis thaliana] gi|67633816|gb|AAY78832.1|
           putative 60S acidic ribosomal protein P1 [Arabidopsis
           thaliana] gi|332005935|gb|AED93318.1| large subunit
           ribosomal protein LP1 [Arabidopsis thaliana]
          Length = 111

 Score =  104 bits (260), Expect = 3e-20
 Identities = 50/62 (80%), Positives = 53/62 (85%)
 Frame = -3

Query: 876 MSVGELGCTYAALILHDDGIPITAEKISTLLKAANLTVESYWPGLFAKLCEKKNIDDLIV 697
           MS  EL CTYAALILHDDGI ITAE IS L+K AN+ VESYWP LFAKLCEKKNIDDLI+
Sbjct: 1   MSTSELACTYAALILHDDGIEITAENISKLVKTANVNVESYWPSLFAKLCEKKNIDDLIM 60

Query: 696 NV 691
           NV
Sbjct: 61  NV 62


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