BLASTX nr result

ID: Scutellaria23_contig00004572 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00004572
         (1329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533227.1| translation initiation factor if-3, putative...   271   4e-70
ref|XP_004144726.1| PREDICTED: translation initiation factor IF-...   268   2e-69
ref|XP_002325123.1| predicted protein [Populus trichocarpa] gi|2...   266   7e-69
ref|XP_004163986.1| PREDICTED: LOW QUALITY PROTEIN: translation ...   266   9e-69
ref|XP_002276984.1| PREDICTED: translation initiation factor IF-...   259   1e-66

>ref|XP_002533227.1| translation initiation factor if-3, putative [Ricinus communis]
            gi|223526947|gb|EEF29148.1| translation initiation factor
            if-3, putative [Ricinus communis]
          Length = 274

 Score =  271 bits (692), Expect = 4e-70
 Identities = 153/263 (58%), Positives = 180/263 (68%), Gaps = 16/263 (6%)
 Frame = -2

Query: 1217 MAGLTSTF-HHPCNSQFPKTLKPSSFYLPTSSFRI--------RXXXXXXXXXXXXXXSA 1065
            MAG+T++F  +P  +Q     K + F L +   ++        +              SA
Sbjct: 1    MAGITTSFPFNPLLTQLTTATKTTQFILSSLESKLFGLRFHCSKPDSLISLSRASVVTSA 60

Query: 1064 RYGGG-------GFRKPKPVEDEALDFSAVKSNTVRLIDQQQKMVGIVSKAEAFQMAEDA 906
            R+GGG         R+    +D ALD S ++S TVRLID+QQ MVG+V K+EA QMAE+A
Sbjct: 61   RFGGGFRSSGDRRSRQSDSEDDHALDISTIRSATVRLIDEQQNMVGVVPKSEAIQMAENA 120

Query: 905  ELDLVILSPDADPPVVRIMDYNXXXXXXXXXXXXXXXKSLATRMDLKELKMGYNIDVHDY 726
             LDLVILSPDADPPVVRIMDYN               KS ATRMDLKELKMGYNID HDY
Sbjct: 121  ALDLVILSPDADPPVVRIMDYNKYRYELQKKKKGQQKKSAATRMDLKELKMGYNIDQHDY 180

Query: 725  SVRLRAAQRFLNDGDKVKIIVSLKGRENEFRNNAIELIRRFQADVGELATEESKNFKDRN 546
             VRLRAA++FL DGDKVK+IV+LKGRENEFRN AIELIRRFQ DVGELATEE+KNF+DRN
Sbjct: 181  DVRLRAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQNDVGELATEETKNFRDRN 240

Query: 545  IFIILVPNKAIAQKAQEPPKKKD 477
            IFI L PNKAI QK+QEPPKK+D
Sbjct: 241  IFITLAPNKAILQKSQEPPKKRD 263


>ref|XP_004144726.1| PREDICTED: translation initiation factor IF-3-like [Cucumis sativus]
          Length = 299

 Score =  268 bits (686), Expect = 2e-69
 Identities = 144/202 (71%), Positives = 160/202 (79%), Gaps = 5/202 (2%)
 Frame = -2

Query: 1067 ARYGGG----GFRKPKPVEDE-ALDFSAVKSNTVRLIDQQQKMVGIVSKAEAFQMAEDAE 903
            AR GG     G    K   DE  LD SA+KS  VRLID +Q MVG+VSKA+A QMAEDAE
Sbjct: 87   ARLGGAPRSSGPPDSKRSNDEIGLDISAIKSINVRLIDAEQNMVGVVSKAQAIQMAEDAE 146

Query: 902  LDLVILSPDADPPVVRIMDYNXXXXXXXXXXXXXXXKSLATRMDLKELKMGYNIDVHDYS 723
            LDLV++SPDADPPVVRIMDYN               KS ATRMDLKELKMGYNID HDYS
Sbjct: 147  LDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYS 206

Query: 722  VRLRAAQRFLNDGDKVKIIVSLKGRENEFRNNAIELIRRFQADVGELATEESKNFKDRNI 543
            VRL+AA++FL DGDKVK+IV+LKGRENEFRN AIELIRRFQ +VGELATEE+KNF+DRNI
Sbjct: 207  VRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNI 266

Query: 542  FIILVPNKAIAQKAQEPPKKKD 477
            FI+LVPNKA+ QKAQEPPKKKD
Sbjct: 267  FIVLVPNKAVLQKAQEPPKKKD 288


>ref|XP_002325123.1| predicted protein [Populus trichocarpa] gi|222866557|gb|EEF03688.1|
            predicted protein [Populus trichocarpa]
          Length = 278

 Score =  266 bits (681), Expect = 7e-69
 Identities = 140/203 (68%), Positives = 160/203 (78%), Gaps = 6/203 (2%)
 Frame = -2

Query: 1067 ARYGGGGF------RKPKPVEDEALDFSAVKSNTVRLIDQQQKMVGIVSKAEAFQMAEDA 906
            AR+GG         RK    +D+AL+ S+++S TVRLIDQQQ MVG+V+  +A QMAED 
Sbjct: 65   ARFGGPRSYDSRRPRKSDSDDDQALNISSIRSATVRLIDQQQNMVGVVTVRDAIQMAEDT 124

Query: 905  ELDLVILSPDADPPVVRIMDYNXXXXXXXXXXXXXXXKSLATRMDLKELKMGYNIDVHDY 726
            EL+LVI+SPDADPPVVRIMDYN               KS A+RMDLKELKMGYNID HDY
Sbjct: 125  ELNLVIVSPDADPPVVRIMDYNKFRYEQQKKKRGQQKKSAASRMDLKELKMGYNIDQHDY 184

Query: 725  SVRLRAAQRFLNDGDKVKIIVSLKGRENEFRNNAIELIRRFQADVGELATEESKNFKDRN 546
             VRLRAA++FL DGDKVK+IV+LKGRENEFRNNAIEL+RRFQ DVGELATEESKNF+DRN
Sbjct: 185  DVRLRAARKFLKDGDKVKVIVNLKGRENEFRNNAIELLRRFQNDVGELATEESKNFRDRN 244

Query: 545  IFIILVPNKAIAQKAQEPPKKKD 477
             FI LVPNKA+ QKAQEPPKKKD
Sbjct: 245  AFITLVPNKALLQKAQEPPKKKD 267


>ref|XP_004163986.1| PREDICTED: LOW QUALITY PROTEIN: translation initiation factor
            IF-3-like [Cucumis sativus]
          Length = 299

 Score =  266 bits (680), Expect = 9e-69
 Identities = 143/202 (70%), Positives = 159/202 (78%), Gaps = 5/202 (2%)
 Frame = -2

Query: 1067 ARYGGG----GFRKPKPVEDE-ALDFSAVKSNTVRLIDQQQKMVGIVSKAEAFQMAEDAE 903
            AR GG     G    K   DE  LD SA+KS  VRLID +Q MVG+VSKA+A QMAEDAE
Sbjct: 87   ARLGGAPRSSGPPDSKRSNDEIGLDISAIKSINVRLIDAEQNMVGVVSKAQAIQMAEDAE 146

Query: 902  LDLVILSPDADPPVVRIMDYNXXXXXXXXXXXXXXXKSLATRMDLKELKMGYNIDVHDYS 723
            LDLV++SPDADPPVVRIMDYN               KS ATRMDLKELKMGYNID HDYS
Sbjct: 147  LDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYS 206

Query: 722  VRLRAAQRFLNDGDKVKIIVSLKGRENEFRNNAIELIRRFQADVGELATEESKNFKDRNI 543
            VRL+AA++FL DGDKVK+IV+LKGRENEFRN AIELIRRFQ +VGELATEE+KNF+DRNI
Sbjct: 207  VRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNI 266

Query: 542  FIILVPNKAIAQKAQEPPKKKD 477
            FI+LVPNKA+ QKAQEPPKK D
Sbjct: 267  FIVLVPNKAVLQKAQEPPKKXD 288


>ref|XP_002276984.1| PREDICTED: translation initiation factor IF-3 [Vitis vinifera]
            gi|297743667|emb|CBI36550.3| unnamed protein product
            [Vitis vinifera]
          Length = 272

 Score =  259 bits (662), Expect = 1e-66
 Identities = 153/261 (58%), Positives = 175/261 (67%), Gaps = 14/261 (5%)
 Frame = -2

Query: 1217 MAGLTSTF-HHPCNSQFPKTLKPSSFYLPTSSFRIRXXXXXXXXXXXXXXS------ARY 1059
            MAGLTS     P   +   T  P  F L +  F +R              S      ARY
Sbjct: 1    MAGLTSGIPFKPFIFRTKTTSSPLYFSLDSQLFGVRLCSPTFSKCRSFSSSLHRSVTARY 60

Query: 1058 GG-------GGFRKPKPVEDEALDFSAVKSNTVRLIDQQQKMVGIVSKAEAFQMAEDAEL 900
            GG          R+    +D+ALD S+++S +VRLID+QQ MVG+VSK++A QMAEDAEL
Sbjct: 61   GGYRSSGDAWRSRQRDSDDDQALDVSSIRSASVRLIDEQQNMVGVVSKSQAIQMAEDAEL 120

Query: 899  DLVILSPDADPPVVRIMDYNXXXXXXXXXXXXXXXKSLATRMDLKELKMGYNIDVHDYSV 720
            DLV+LSPDADPPVVRIMDYN               KS A RMDLKELKMGYNID HDYSV
Sbjct: 121  DLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAANRMDLKELKMGYNIDSHDYSV 180

Query: 719  RLRAAQRFLNDGDKVKIIVSLKGRENEFRNNAIELIRRFQADVGELATEESKNFKDRNIF 540
            RL+AA++FL DGDKVKIIV+LKGRENEFRN AIELIRRFQ DVGELATEESKNF  RNIF
Sbjct: 181  RLKAARKFLQDGDKVKIIVNLKGRENEFRNIAIELIRRFQNDVGELATEESKNFSVRNIF 240

Query: 539  IILVPNKAIAQKAQEPPKKKD 477
            I+LVPNKA+ QK QE  KK +
Sbjct: 241  IVLVPNKALLQKGQESSKKTE 261


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