BLASTX nr result

ID: Scutellaria23_contig00004498 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00004498
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15151.3| unnamed protein product [Vitis vinifera]              140   1e-31
ref|XP_002284415.1| PREDICTED: putative pre-mRNA-splicing factor...   140   1e-31
ref|XP_003527106.1| PREDICTED: putative pre-mRNA-splicing factor...   136   2e-30
ref|XP_003527105.1| PREDICTED: putative pre-mRNA-splicing factor...   136   2e-30
ref|XP_002522713.1| ATP-dependent RNA helicase, putative [Ricinu...   133   2e-29

>emb|CBI15151.3| unnamed protein product [Vitis vinifera]
          Length = 954

 Score =  140 bits (353), Expect = 1e-31
 Identities = 66/98 (67%), Positives = 87/98 (88%)
 Frame = -3

Query: 299 DLKTWVSDKLMALLGYSQPTVVQYVITLSKKASSPSEIVNQLVDLGISSSTETVVFAKEI 120
           +LK WVSDKLM+LLGYSQPT+VQYV+ L+K+ASSP+++V +LV+ G+S+S+ET  FA+EI
Sbjct: 6   NLKVWVSDKLMSLLGYSQPTLVQYVVGLAKQASSPADVVGKLVEFGLSASSETRSFAEEI 65

Query: 119 FSRVEHKSSGLNAYQQQEREAAILARKQKTYTMLEEDD 6
           FS+V HK+SGLN YQ+QEREAA+L RKQKTY +L+ DD
Sbjct: 66  FSKVPHKASGLNVYQKQEREAAMLVRKQKTYAILDADD 103


>ref|XP_002284415.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
           helicase DHX16-like [Vitis vinifera]
          Length = 1056

 Score =  140 bits (353), Expect = 1e-31
 Identities = 66/98 (67%), Positives = 87/98 (88%)
 Frame = -3

Query: 299 DLKTWVSDKLMALLGYSQPTVVQYVITLSKKASSPSEIVNQLVDLGISSSTETVVFAKEI 120
           +LK WVSDKLM+LLGYSQPT+VQYV+ L+K+ASSP+++V +LV+ G+S+S+ET  FA+EI
Sbjct: 6   NLKVWVSDKLMSLLGYSQPTLVQYVVGLAKQASSPADVVGKLVEFGLSASSETRSFAEEI 65

Query: 119 FSRVEHKSSGLNAYQQQEREAAILARKQKTYTMLEEDD 6
           FS+V HK+SGLN YQ+QEREAA+L RKQKTY +L+ DD
Sbjct: 66  FSKVPHKASGLNVYQKQEREAAMLVRKQKTYAILDADD 103


>ref|XP_003527106.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
           helicase DHX16 isoform 2 [Glycine max]
          Length = 1035

 Score =  136 bits (343), Expect = 2e-30
 Identities = 68/99 (68%), Positives = 88/99 (88%)
 Frame = -3

Query: 299 DLKTWVSDKLMALLGYSQPTVVQYVITLSKKASSPSEIVNQLVDLGISSSTETVVFAKEI 120
           +LKTWVSDKLM+LLGYSQPTVVQY+I LSK+A+SP+++V +LV+ GI SS +T  FA+EI
Sbjct: 6   NLKTWVSDKLMSLLGYSQPTVVQYMIGLSKQATSPADLVGKLVEFGI-SSMDTHAFAEEI 64

Query: 119 FSRVEHKSSGLNAYQQQEREAAILARKQKTYTMLEEDDD 3
           +SRV  +SSG+N YQ+QEREAA+LARKQKTY++L+ DDD
Sbjct: 65  YSRVPRRSSGINQYQKQEREAAMLARKQKTYSILKADDD 103


>ref|XP_003527105.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
           helicase DHX16 isoform 1 [Glycine max]
          Length = 1044

 Score =  136 bits (343), Expect = 2e-30
 Identities = 68/99 (68%), Positives = 88/99 (88%)
 Frame = -3

Query: 299 DLKTWVSDKLMALLGYSQPTVVQYVITLSKKASSPSEIVNQLVDLGISSSTETVVFAKEI 120
           +LKTWVSDKLM+LLGYSQPTVVQY+I LSK+A+SP+++V +LV+ GI SS +T  FA+EI
Sbjct: 6   NLKTWVSDKLMSLLGYSQPTVVQYMIGLSKQATSPADLVGKLVEFGI-SSMDTHAFAEEI 64

Query: 119 FSRVEHKSSGLNAYQQQEREAAILARKQKTYTMLEEDDD 3
           +SRV  +SSG+N YQ+QEREAA+LARKQKTY++L+ DDD
Sbjct: 65  YSRVPRRSSGINQYQKQEREAAMLARKQKTYSILKADDD 103


>ref|XP_002522713.1| ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223538063|gb|EEF39675.1| ATP-dependent RNA helicase,
           putative [Ricinus communis]
          Length = 756

 Score =  133 bits (334), Expect = 2e-29
 Identities = 64/99 (64%), Positives = 83/99 (83%)
 Frame = -3

Query: 299 DLKTWVSDKLMALLGYSQPTVVQYVITLSKKASSPSEIVNQLVDLGISSSTETVVFAKEI 120
           DLKTWVSDKLM++LGYSQ TVVQY+I +SK+A+SP+++  +L + G S+S ET  F++E+
Sbjct: 5   DLKTWVSDKLMSILGYSQSTVVQYIIGISKQANSPADVQAKLSEFGFSTSAETRSFSEEL 64

Query: 119 FSRVEHKSSGLNAYQQQEREAAILARKQKTYTMLEEDDD 3
           FSRV  K SGLN YQ+QEREAA+LARKQ TYT+L+ DDD
Sbjct: 65  FSRVPRKQSGLNIYQKQEREAAMLARKQLTYTLLDADDD 103


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