BLASTX nr result

ID: Scutellaria23_contig00004437 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00004437
         (231 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACZ54946.1| type 2 histone deacetylase b [Nicotiana tabacum]        66   3e-09
gb|ACZ54945.1| type 2 histone deacetylase a [Nicotiana tabacum]        64   1e-08

>gb|ACZ54946.1| type 2 histone deacetylase b [Nicotiana tabacum]
          Length = 294

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 38/66 (57%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
 Frame = +3

Query: 36  IPLTVANNGKPAPKLKQEKPVESEKPKAAKDKEVGAGKQKVKIVEPKKDVKPEEDADSSD 215
           IPLT+ANNGKP  K+K     E+EK  AAKD    +GKQKVKIVEP KD K +++ +S+D
Sbjct: 115 IPLTIANNGKPEAKVK-----EAEKSNAAKDS--ASGKQKVKIVEPSKDAKADDEDESTD 167

Query: 216 -DLMSE 230
            D MSE
Sbjct: 168 EDEMSE 173


>gb|ACZ54945.1| type 2 histone deacetylase a [Nicotiana tabacum]
          Length = 295

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 37/66 (56%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
 Frame = +3

Query: 36  IPLTVANNGKPAPKLKQEKPVESEKPKAAKDKEVGAGKQKVKIVEPKKDVKPEEDADSSD 215
           IPLT+ANNGKP  K+K     E+EK   AKD    +GKQKVKIVEP KD K +++ +S+D
Sbjct: 115 IPLTIANNGKPEAKVK-----EAEKSNVAKDS--ASGKQKVKIVEPSKDAKADDEDESTD 167

Query: 216 -DLMSE 230
            D MSE
Sbjct: 168 EDEMSE 173


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