BLASTX nr result

ID: Scutellaria23_contig00004372 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00004372
         (692 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003602368.1| 60S acidic ribosomal protein P1 [Medicago tr...   112   7e-23
ref|XP_002524416.1| 60S acidic ribosomal protein P1, putative [R...   112   7e-23
ref|XP_002515071.1| 60S acidic ribosomal protein P1, putative [R...   108   1e-21
ref|XP_001761556.1| predicted protein [Physcomitrella patens sub...   107   2e-21
ref|XP_002279082.1| PREDICTED: 60S acidic ribosomal protein P1-1...   107   2e-21

>ref|XP_003602368.1| 60S acidic ribosomal protein P1 [Medicago truncatula]
           gi|355491416|gb|AES72619.1| 60S acidic ribosomal protein
           P1 [Medicago truncatula] gi|388507442|gb|AFK41787.1|
           unknown [Medicago truncatula]
          Length = 110

 Score =  112 bits (280), Expect = 7e-23
 Identities = 63/112 (56%), Positives = 69/112 (61%)
 Frame = -3

Query: 615 MSIGELGCTYASLILHDDGIPVTAEKIATLLKAANLSVESYWPSLFAKLCEKKNVDDLVM 436
           MS GELGC YA+LILHDDGIP+TAEKI TLLKAAN++VESYWPSLFAKL + KNVDDLV+
Sbjct: 1   MSSGELGCIYATLILHDDGIPITAEKIGTLLKAANVTVESYWPSLFAKLAQSKNVDDLVL 60

Query: 435 NXXXXXXXXXXXXAPTXXXXXXXXXXXXXXXXXXXXXXXXESDDDMGFGLFD 280
           N            AP                         ESDDDMGF LFD
Sbjct: 61  NSGAVGGAAVAVSAPA--AGGGTAAAAEPAAVEKKEEAKEESDDDMGFSLFD 110


>ref|XP_002524416.1| 60S acidic ribosomal protein P1, putative [Ricinus communis]
           gi|223536300|gb|EEF37951.1| 60S acidic ribosomal protein
           P1, putative [Ricinus communis]
          Length = 110

 Score =  112 bits (280), Expect = 7e-23
 Identities = 62/112 (55%), Positives = 70/112 (62%)
 Frame = -3

Query: 615 MSIGELGCTYASLILHDDGIPVTAEKIATLLKAANLSVESYWPSLFAKLCEKKNVDDLVM 436
           M+ GEL CTYA+LILHDDGIPVT+EKIATL+KAAN++VESYWPSLFAKL EKKN+DDLVM
Sbjct: 1   MAAGELACTYATLILHDDGIPVTSEKIATLVKAANVAVESYWPSLFAKLAEKKNIDDLVM 60

Query: 435 NXXXXXXXXXXXXAPTXXXXXXXXXXXXXXXXXXXXXXXXESDDDMGFGLFD 280
           N              +                        ESDDDMGF LFD
Sbjct: 61  NVGSGGGAAPVAV--SAPAAGAGAAAAAPAVEEKKEEPKEESDDDMGFSLFD 110


>ref|XP_002515071.1| 60S acidic ribosomal protein P1, putative [Ricinus communis]
           gi|223545551|gb|EEF47055.1| 60S acidic ribosomal protein
           P1, putative [Ricinus communis]
          Length = 113

 Score =  108 bits (270), Expect = 1e-21
 Identities = 58/113 (51%), Positives = 69/113 (61%), Gaps = 1/113 (0%)
 Frame = -3

Query: 615 MSIGELGCTYASLILHDDGIPVTAEKIATLLKAANLSVESYWPSLFAKLCEKKNVDDLVM 436
           MS+GEL C+YA ++LHDDGIP+TAEKIA L+KAAN+ +ESYWPSLFAKL EK+N++DLVM
Sbjct: 1   MSVGELACSYAVMVLHDDGIPITAEKIAQLVKAANVQIESYWPSLFAKLAEKRNIEDLVM 60

Query: 435 N-XXXXXXXXXXXXAPTXXXXXXXXXXXXXXXXXXXXXXXXESDDDMGFGLFD 280
           N             AP                         ESDDDMGF LFD
Sbjct: 61  NVGSGGGGAPVAVAAPAGGAAAGGAAAAAPPPEEKKEEPQEESDDDMGFSLFD 113


>ref|XP_001761556.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162687240|gb|EDQ73624.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 107

 Score =  107 bits (268), Expect = 2e-21
 Identities = 61/112 (54%), Positives = 67/112 (59%)
 Frame = -3

Query: 615 MSIGELGCTYASLILHDDGIPVTAEKIATLLKAANLSVESYWPSLFAKLCEKKNVDDLVM 436
           MSI EL CTYA LILHDDGI +TA+KIA L+KAAN+SVE YWPSLFAKLCEK++VDDLV 
Sbjct: 1   MSISELACTYACLILHDDGIAITADKIAALVKAANVSVEGYWPSLFAKLCEKRSVDDLVT 60

Query: 435 NXXXXXXXXXXXXAPTXXXXXXXXXXXXXXXXXXXXXXXXESDDDMGFGLFD 280
           N            AP                         ESDDDMGF LFD
Sbjct: 61  NVGGGGGAVAVSAAPA-----ASAAVEAPKEEEKKEEPKEESDDDMGFSLFD 107


>ref|XP_002279082.1| PREDICTED: 60S acidic ribosomal protein P1-1 isoform 1 [Vitis
           vinifera] gi|297742458|emb|CBI34607.3| unnamed protein
           product [Vitis vinifera]
          Length = 111

 Score =  107 bits (267), Expect = 2e-21
 Identities = 62/112 (55%), Positives = 67/112 (59%)
 Frame = -3

Query: 615 MSIGELGCTYASLILHDDGIPVTAEKIATLLKAANLSVESYWPSLFAKLCEKKNVDDLVM 436
           MSIGE  CT A LILHDDGIPVTAEKI+TLLKAAN+SVESYWP LFAKL EKK+VDDL+M
Sbjct: 1   MSIGEQACTLAILILHDDGIPVTAEKISTLLKAANVSVESYWPGLFAKLVEKKSVDDLIM 60

Query: 435 NXXXXXXXXXXXXAPTXXXXXXXXXXXXXXXXXXXXXXXXESDDDMGFGLFD 280
           N              T                        ESD+DMGF LFD
Sbjct: 61  N-VGSGGGGAPMAVATMAGGGDAAGAAAPPPEEKKEEPKEESDEDMGFSLFD 111


Top