BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00004365
         (3977 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546500.1| PREDICTED: RNA polymerase-associated protein...  1524   0.0  
ref|XP_003533781.1| PREDICTED: RNA polymerase-associated protein...  1521   0.0  
ref|XP_002326116.1| PAF1 complex component [Populus trichocarpa]...  1514   0.0  
ref|XP_004144025.1| PREDICTED: RNA polymerase-associated protein...  1512   0.0  
ref|XP_004161106.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymera...  1477   0.0  

>ref|XP_003546500.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Glycine
            max]
          Length = 1088

 Score = 1524 bits (3947), Expect = 0.0
 Identities = 785/1114 (70%), Positives = 893/1114 (80%), Gaps = 11/1114 (0%)
 Frame = -1

Query: 3521 MACVYIPVQNSEEEVRVALDQLPRDATDILDILKAEQAPLDLWLIIAREYFKQGKLEQFR 3342
            MA VYIPVQNSEEEVRVALDQLPRDA+DILDILKAEQAPLDLWLIIAREYFKQGK++Q+R
Sbjct: 1    MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIDQYR 60

Query: 3341 QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEYFIQATKYYNKA 3162
            QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEE+FI AT+YYNKA
Sbjct: 61   QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA 120

Query: 3161 SRIDMHEPSTWIGKGQLLLAKGDVEQAFNAFKIVLDGDRDNVPALLGQACVHFNRGRYSD 2982
            SRIDMHEPSTW+GKGQLLLAKG+VEQA  AFKIVLDGD DNVPALLGQACV FNRGR+SD
Sbjct: 121  SRIDMHEPSTWVGKGQLLLAKGEVEQASAAFKIVLDGDHDNVPALLGQACVEFNRGRFSD 180

Query: 2981 ALELYKRALQVYPWAPS-VRVGIALCHYKLGRFEKAKQAFRRVLQLDPDNVEALVALGIS 2805
            +LELYKR LQVYP  P+ VR+GI LC YKLG+FEKA+QAF RVLQLDP+NVE+L+AL I 
Sbjct: 181  SLELYKRVLQVYPNCPAAVRLGIGLCRYKLGQFEKAQQAFERVLQLDPENVESLIALAIM 240

Query: 2804 DLQTNEAGGIRSGMEKMQMAFEIYPYCAMSLNYLANHFFFTGQHFLVEQLTETALAVTMH 2625
            DL+TNEA GIR+GM KMQ AFEIYPYCAM+LNYLANHFFFTGQHFLVEQLTETALAVT H
Sbjct: 241  DLRTNEATGIRTGMVKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300

Query: 2624 GPTKAHSYYNLARSYHSKGDYEKAGMYYMASVKESNNAHEFVLPYYGLGQVQLKLGDLRS 2445
            GPTK+HSYYNLARSYHSKGDY+KAG+YYMASVKE N  HEFV PYYGLGQVQ+KLGD +S
Sbjct: 301  GPTKSHSYYNLARSYHSKGDYDKAGVYYMASVKEVNKPHEFVFPYYGLGQVQIKLGDFKS 360

Query: 2444 ALTNFEKVLEVQPENCDTLKALGHIYVQLEQNEKAQELYRKATKIDPRDPQAFLDLGDLL 2265
            AL+NFEKVLEV P+NC+TLKALGHIYVQL Q +K Q+  RKATKIDPRD QAFL+LG+LL
Sbjct: 361  ALSNFEKVLEVYPDNCETLKALGHIYVQLGQTDKGQDFIRKATKIDPRDAQAFLELGELL 420

Query: 2264 ISTDINAALDAFKTARSLLKKGNEEVPLDLLNNIGVLHFERGEFELADEAFREALGEGIW 2085
            I +D  AALDAFKTA +L KKG +EVP++LLNNIGVL FERGEFELA + F+EALG+G+W
Sbjct: 421  ILSDTGAALDAFKTAHTLFKKGGQEVPIELLNNIGVLQFERGEFELARQTFKEALGDGVW 480

Query: 2084 CDFFNAERESISNSEQTNAYGEQLSPSRRSRAKMIHSLRYPVDADSVVRQYKDLQLFHRL 1905
              F N E +S                               +DA +   Q+KD+QLFH L
Sbjct: 481  LSFINEENKS------------------------------SIDAATSTLQFKDMQLFHDL 510

Query: 1904 EEQGLSVELPWDKVSALFNLARVQEQLHDTESASILYRLIIFKYPDYTDAYLRLAAMAKA 1725
            E  G  VE+PWDKV+ LFNLAR+ EQL+D+ +ASI YRLI+FKYPDY DAYLRLAA+AKA
Sbjct: 511  ESNGHHVEVPWDKVTVLFNLARLLEQLYDSGTASIFYRLILFKYPDYIDAYLRLAAIAKA 570

Query: 1724 RNNVQISLELINDALKVDEKCTDALLMLGDLELKNDDWVKAKETFRTAKDSTDAKDSYAA 1545
            RNN+ +S+EL+NDALKV+ KC +AL MLG+LELKNDDWVKAKET RTA D+TD KDSYA 
Sbjct: 571  RNNILLSIELVNDALKVNNKCPNALSMLGELELKNDDWVKAKETLRTASDATDGKDSYAT 630

Query: 1544 VCLGNWNYFAANRNEKRAPKLEATHYEKAKELYTKVLLQQSANLYAANGAGMVFAEKGQF 1365
            + LGNWNYFAA RNEKR PKLEATH EKAKEL T+VL+Q S+NLYAANGA +V AEKG F
Sbjct: 631  LSLGNWNYFAAVRNEKRNPKLEATHLEKAKELCTRVLIQHSSNLYAANGAAVVLAEKGHF 690

Query: 1364 DIAKDLFTQVQEAASGSFNVQMPDVWINLAHVHFAQGNFALAVKMYENCSRKFFNNTDSQ 1185
            D++KD+FTQVQEAASGS  VQMPDVWINLAHV+FAQGNF LAVKMY+NC RKF++NTDSQ
Sbjct: 691  DVSKDIFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFTLAVKMYQNCLRKFYHNTDSQ 750

Query: 1184 VLLYLARTHYEAEQWQDCKKTLLRAIHLAPSNYTLRFDAGVTLQKFSASTLSKTKRTVDE 1005
            +LLYLARTHYEAEQWQDC KTLLRAIHLAPSNYTLRFDAGV +QKFSASTL K KRT DE
Sbjct: 751  ILLYLARTHYEAEQWQDCIKTLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKAKRTADE 810

Query: 1004 VRATVAELKNAVRLFSLLSAASNLHFHGFDETKIATHVAYCKHLLEAANVHCELAEREEM 825
            VRATVAEL+NAVR+FS LSAASNLH HGFDE KI THV YC HLL AA VH E AE EE 
Sbjct: 811  VRATVAELQNAVRVFSQLSAASNLHIHGFDEKKIDTHVGYCNHLLSAAKVHLEAAEHEEQ 870

Query: 824  QNIQRLEVMRQMELADESRRKAEEQRKVQMEKRKQEDELKQVMQQEKHLERIKEQWKXXX 645
            Q  QR E+ RQ+ LA+E+RRKAEEQRK QME+RKQEDELK+V +QE+H  R+KEQWK   
Sbjct: 871  QVRQRQELARQVALAEEARRKAEEQRKFQMERRKQEDELKRVQKQEEHFRRVKEQWKSSS 930

Query: 644  XXSRRKEKPQTEDEEXXXXXXXXXXXXXXXXXKS----RYESXXXXXXXXXXXXXXXXDN 477
               RR+   +++DEE                       RY++                + 
Sbjct: 931  HSKRRE---RSDDEEGGTGEKKRKKGGKRRKKDKHSKLRYDAEEPEDDLMDEQGMEDEEA 987

Query: 476  HTSYGEQYNQTNEVEDKEDAPQDLLAAAGLEDSDADNDEAAPSNT-NRRRRAWSESDEDE 300
              +Y E+  QT   +D E+  Q LLAAAGLEDSDAD + AAPS++  RRR+A SESD+DE
Sbjct: 988  DINYREE-PQTQMNDDAEENAQGLLAAAGLEDSDADEETAAPSSSIARRRQALSESDDDE 1046

Query: 299  EPLQRQ-----PEADHMQESDGEVNVGGAADDEE 213
              LQRQ       +  MQ SDGE+  G   + ++
Sbjct: 1047 PLLQRQSSPVRQNSADMQLSDGEIRDGDKTNGDD 1080


>ref|XP_003533781.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Glycine
            max]
          Length = 1086

 Score = 1521 bits (3938), Expect = 0.0
 Identities = 785/1115 (70%), Positives = 896/1115 (80%), Gaps = 12/1115 (1%)
 Frame = -1

Query: 3521 MACVYIPVQNSEEEVRVALDQLPRDATDILDILKAEQAPLDLWLIIAREYFKQGKLEQFR 3342
            MA VYIPVQNSEEEVRVALDQLPRDA+DILDILKAEQAPLDLWL+IAREYFKQGK++QFR
Sbjct: 1    MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLVIAREYFKQGKIDQFR 60

Query: 3341 QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEYFIQATKYYNKA 3162
            QILEEGSSPEID+YYADVRYERIAILNALGAYYSYLGKIETKQREKEE+FI AT+YYNKA
Sbjct: 61   QILEEGSSPEIDDYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA 120

Query: 3161 SRIDMHEPSTWIGKGQLLLAKGDVEQAFNAFKIVLDGDRDNVPALLGQACVHFNRGRYSD 2982
            SRIDMHEPSTW+GKGQLLLAKG+VEQA  AFKIVLDGDRDNVPALLGQACV FNRGRYSD
Sbjct: 121  SRIDMHEPSTWVGKGQLLLAKGEVEQASAAFKIVLDGDRDNVPALLGQACVEFNRGRYSD 180

Query: 2981 ALELYKRALQVYPWAPS-VRVGIALCHYKLGRFEKAKQAFRRVLQLDPDNVEALVALGIS 2805
            +LELYKRAL VYP  P+ VR+GI LC YKLG+FEKA+QAF R   LDP+NVEALVAL I 
Sbjct: 181  SLELYKRALLVYPDCPAAVRLGIGLCRYKLGQFEKAQQAFER---LDPENVEALVALAIM 237

Query: 2804 DLQTNEAGGIRSGMEKMQMAFEIYPYCAMSLNYLANHFFFTGQHFLVEQLTETALAVTMH 2625
            DL+TNEA GIR+GM KMQ AFEIYPYCAM+LNYLANHFFFTGQHFLVEQLTETALAVT H
Sbjct: 238  DLRTNEATGIRTGMVKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 297

Query: 2624 GPTKAHSYYNLARSYHSKGDYEKAGMYYMASVKESNNAHEFVLPYYGLGQVQLKLGDLRS 2445
            GPTK+HSYYNLARSYHSKGDY+KAG+YYMASVKE N  HEFV PYYGLGQVQ+KLGD +S
Sbjct: 298  GPTKSHSYYNLARSYHSKGDYDKAGVYYMASVKEVNKPHEFVFPYYGLGQVQIKLGDFKS 357

Query: 2444 ALTNFEKVLEVQPENCDTLKALGHIYVQLEQNEKAQELYRKATKIDPRDPQAFLDLGDLL 2265
            AL+NFEKVLEV P+NC+TLKALGHIYVQL Q +K Q+  RKATKIDPRD QAFL+LG+LL
Sbjct: 358  ALSNFEKVLEVYPDNCETLKALGHIYVQLGQTDKGQDFIRKATKIDPRDAQAFLELGELL 417

Query: 2264 ISTDINAALDAFKTARSLLKKGNEEVPLDLLNNIGVLHFERGEFELADEAFREALGEGIW 2085
            I +D  AALDAFKTAR+L KKG +EVP++LLNNIGVL FERGEFELA + F+EALG+G+W
Sbjct: 418  ILSDTGAALDAFKTARTLFKKGGQEVPIELLNNIGVLQFERGEFELAQQTFKEALGDGVW 477

Query: 2084 CDFFNAERESISNSEQTNAYGEQLSPSRRSRAKMIHSLRYPVDADSVVRQYKDLQLFHRL 1905
              F N E++S                               +DA +   Q+KD++LFH L
Sbjct: 478  LSFINEEKKS------------------------------SIDAATSTLQFKDMKLFHDL 507

Query: 1904 EEQGLSVELPWDKVSALFNLARVQEQLHDTESASILYRLIIFKYPDYTDAYLRLAAMAKA 1725
            E  G  VE+PWDKV+ LFNLAR+ EQL+D+ +ASILYRL++FKYPDY DAYLRLAA+AKA
Sbjct: 508  ESNGHHVEVPWDKVTVLFNLARLLEQLNDSGTASILYRLVLFKYPDYIDAYLRLAAIAKA 567

Query: 1724 RNNVQISLELINDALKVDEKCTDALLMLGDLELKNDDWVKAKETFRTAKDSTDAKDSYAA 1545
            RNN+ +S+EL+NDALKV+ KC +AL MLG+LELKNDDWVKAKET R A D+T+ KDSYA+
Sbjct: 568  RNNILLSIELVNDALKVNNKCPNALSMLGELELKNDDWVKAKETLRAASDATEGKDSYAS 627

Query: 1544 VCLGNWNYFAANRNEKRAPKLEATHYEKAKELYTKVLLQQSANLYAANGAGMVFAEKGQF 1365
            + LGNWNYFAA RNEKR PKLEATH EKAKELYT+VL+Q S+NLYAANGA +V AEKG F
Sbjct: 628  LSLGNWNYFAAVRNEKRNPKLEATHLEKAKELYTRVLIQHSSNLYAANGAAVVLAEKGHF 687

Query: 1364 DIAKDLFTQVQEAASGSFNVQMPDVWINLAHVHFAQGNFALAVKMYENCSRKFFNNTDSQ 1185
            D++KD+FTQVQEAASGS  VQMPDVWINLAHV+FAQGNF LAVKMY+NC RKF++NTDSQ
Sbjct: 688  DVSKDIFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFTLAVKMYQNCLRKFYHNTDSQ 747

Query: 1184 VLLYLARTHYEAEQWQDCKKTLLRAIHLAPSNYTLRFDAGVTLQKFSASTLSKTKRTVDE 1005
            +LLYLARTHYEAEQWQDC KTLLRAIHLAPSNYTLRFDAGV +QKFSASTL K KRT DE
Sbjct: 748  ILLYLARTHYEAEQWQDCIKTLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKAKRTADE 807

Query: 1004 VRATVAELKNAVRLFSLLSAASNLHFHGFDETKIATHVAYCKHLLEAANVHCELAEREEM 825
            VRATVAEL+NAVR+FS LSAASNLH HGFDE KI THV YC HLL AA VH E AEREE 
Sbjct: 808  VRATVAELQNAVRVFSQLSAASNLHIHGFDEKKIDTHVGYCNHLLSAAKVHLEAAEREEQ 867

Query: 824  QNIQRLEVMRQMELADESRRKAEEQRKVQMEKRKQEDELKQVMQQEKHLERIKEQWKXXX 645
            Q  QR E+ RQ+  A+E+RRKAEEQRK QME+RKQEDELK+V QQE+H  R+KEQWK   
Sbjct: 868  QVRQRQELARQVAFAEEARRKAEEQRKFQMERRKQEDELKRVQQQEEHFRRVKEQWKSSS 927

Query: 644  XXSRRKEKPQTEDEE-----XXXXXXXXXXXXXXXXXKSRYESXXXXXXXXXXXXXXXXD 480
               RR+   +++DEE                      KSRY++                +
Sbjct: 928  HSKRRE---RSDDEEGGGTGEKKRKKGGKRRKKDKHSKSRYDTEEPENDMMDEQEMEDEE 984

Query: 479  NHTSYGEQYNQTNEVEDKEDAPQDLLAAAGLEDSDADNDEAAPSNT-NRRRRAWSESDED 303
               +Y E+  QT   +D E+  Q LLAAAGLEDSDAD +  APS++  RRR+A SESD+D
Sbjct: 985  ADINYREE-PQTQMNDDAEENAQGLLAAAGLEDSDADEEAPAPSSSIARRRQALSESDDD 1043

Query: 302  EEPLQRQ-----PEADHMQESDGEVNVGGAADDEE 213
            E  +QRQ       +  MQ SDGE+  G   + ++
Sbjct: 1044 EPLIQRQSSPARENSADMQLSDGEIRDGDKTNGDD 1078


>ref|XP_002326116.1| PAF1 complex component [Populus trichocarpa]
            gi|222833309|gb|EEE71786.1| PAF1 complex component
            [Populus trichocarpa]
          Length = 1056

 Score = 1514 bits (3920), Expect = 0.0
 Identities = 779/1088 (71%), Positives = 882/1088 (81%), Gaps = 5/1088 (0%)
 Frame = -1

Query: 3521 MACVYIPVQNSEEEVRVALDQLPRDATDILDILKAEQAPLDLWLIIAREYFKQGKLEQFR 3342
            MA VYIPVQNSEEEVRVALDQLPRDA+DILDILKAEQAPLDLWLIIAREYFKQGKL+QFR
Sbjct: 1    MAFVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKLDQFR 60

Query: 3341 QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEYFIQATKYYNKA 3162
            QILEEGSS EIDEYYADVRYERIAILNALGAYYSYLGK+ETKQREKEEYFIQATK+YNKA
Sbjct: 61   QILEEGSSHEIDEYYADVRYERIAILNALGAYYSYLGKVETKQREKEEYFIQATKHYNKA 120

Query: 3161 SRIDMHEPSTWIGKGQLLLAKGDVEQAFNAFKIVLDGDRDNVPALLGQACVHFNRGRYSD 2982
            SRIDMHEPSTW+GKGQLLLAKG+VEQA  AF+IVL+GDRDNV ALLGQACV ++RG Y +
Sbjct: 121  SRIDMHEPSTWVGKGQLLLAKGEVEQASAAFRIVLEGDRDNVSALLGQACVEYSRGHYGE 180

Query: 2981 ALELYKRALQVYPWAP-SVRVGIALCHYKLGRFEKAKQAFRRVLQLDPDNVEALVALGIS 2805
            +L L+KRALQVYP  P +VR+GI  CHYKLG   KA  AF+R   LDP+NVEALV+L I 
Sbjct: 181  SLTLFKRALQVYPDCPGAVRLGIGHCHYKLGHVGKACLAFQR---LDPENVEALVSLAIL 237

Query: 2804 DLQTNEAGGIRSGMEKMQMAFEIYPYCAMSLNYLANHFFFTGQHFLVEQLTETALAVTMH 2625
            DLQTNEA  IR GMEKMQ AFEIYPYCAM+LNYLANHFFFTGQHFLVEQLTETALAVT H
Sbjct: 238  DLQTNEAAAIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 297

Query: 2624 GPTKAHSYYNLARSYHSKGDYEKAGMYYMASVKESNNAHEFVLPYYGLGQVQLKLGDLRS 2445
            GPTK+HSYYNLARSYHSKGDYE A  YY ASVKE N   EFV PYYGLGQVQLKLG++++
Sbjct: 298  GPTKSHSYYNLARSYHSKGDYETASRYYWASVKEINKPSEFVFPYYGLGQVQLKLGEIKN 357

Query: 2444 ALTNFEKVLEVQPENCDTLKALGHIYVQLEQNEKAQELYRKATKIDPRDPQAFLDLGDLL 2265
            AL+NFEKVLEV P+NC+TLK LGHIYVQL Q EKAQE  RKA KIDPRD QAFLDLG+LL
Sbjct: 358  ALSNFEKVLEVYPDNCETLKVLGHIYVQLGQTEKAQEFLRKAAKIDPRDAQAFLDLGELL 417

Query: 2264 ISTDINAALDAFKTARSLLKKGNEEVPLDLLNNIGVLHFERGEFELADEAFREALGEGIW 2085
            ISTD  AALDAFKTARSLLKKG EEVP+++LNNI V+HFER E ELA + F+EALG+GIW
Sbjct: 418  ISTDTGAALDAFKTARSLLKKGGEEVPIEVLNNIAVIHFEREELELALQNFKEALGDGIW 477

Query: 2084 CDFFNAERESISNSEQTNAYGEQLSPSRRSRAKMIHSLRYPVDADSVVRQYKDLQLFHRL 1905
              F   +  +                             Y VDA S + QYKD+Q+F RL
Sbjct: 478  LTFLEGKANT-----------------------------YEVDATSSLLQYKDMQIFRRL 508

Query: 1904 EEQGLSVELPWDKVSALFNLARVQEQLHDTESASILYRLIIFKYPDYTDAYLRLAAMAKA 1725
            EE+G SVEL W+KV+ LFNLAR+ EQLH+TE+AS LYRLI+FKYPDY DAYLRLAA+AKA
Sbjct: 509  EEEGHSVELSWNKVTTLFNLARLLEQLHNTETASTLYRLILFKYPDYVDAYLRLAAIAKA 568

Query: 1724 RNNVQISLELINDALKVDEKCTDALLMLGDLELKNDDWVKAKETFRTAKDSTDAKDSYAA 1545
            RNN+ +S+EL+N+AL V++KC +AL MLGDLELKNDDWVKAKETFR A ++TD KDSYA 
Sbjct: 569  RNNLPLSIELVNEALTVNDKCPNALSMLGDLELKNDDWVKAKETFRAASEATDGKDSYAT 628

Query: 1544 VCLGNWNYFAANRNEKRAPKLEATHYEKAKELYTKVLLQQSANLYAANGAGMVFAEKGQF 1365
            + LGNWNYFAA RNEKR PKLEATH EKAKELYT+VL+Q +ANLYAANGAG+V AEKG F
Sbjct: 629  LSLGNWNYFAAIRNEKRNPKLEATHLEKAKELYTRVLVQHTANLYAANGAGVVLAEKGHF 688

Query: 1364 DIAKDLFTQVQEAASGSFNVQMPDVWINLAHVHFAQGNFALAVKMYENCSRKFFNNTDSQ 1185
            D++KDLFTQVQEAASGS  VQMPDVWINLAHV+FAQGNFALAVKMY+NC +KFF NTDSQ
Sbjct: 689  DVSKDLFTQVQEAASGSIFVQMPDVWINLAHVYFAQGNFALAVKMYQNCLQKFFYNTDSQ 748

Query: 1184 VLLYLARTHYEAEQWQDCKKTLLRAIHLAPSNYTLRFDAGVTLQKFSASTLSKTKRTVDE 1005
            +LLYLARTHYEAEQWQDCK+TLLRAIHL PSNYTLRFDAGV +QKFSASTL KTKRTVDE
Sbjct: 749  ILLYLARTHYEAEQWQDCKRTLLRAIHLTPSNYTLRFDAGVAMQKFSASTLQKTKRTVDE 808

Query: 1004 VRATVAELKNAVRLFSLLSAASNLHFHGFDETKIATHVAYCKHLLEAANVHCELAEREEM 825
            VR+TV EL+NAVRLFS LSAASNL+F+GFDE KI THV YCKHLLEAA VH E AEREE 
Sbjct: 809  VRSTVDELENAVRLFSQLSAASNLYFNGFDEKKINTHVEYCKHLLEAAIVHREAAEREEQ 868

Query: 824  QNIQRLEVMRQMELADESRRKAEEQRKVQMEKRKQEDELKQVMQQEKHLERIKEQWKXXX 645
            QN QRL++ RQM LA+E+RRKAEEQRK Q+E+RKQEDELK+V QQE+H ER+KEQWK   
Sbjct: 869  QNRQRLDLARQMALAEEARRKAEEQRKFQLERRKQEDELKRVRQQEEHFERVKEQWKSST 928

Query: 644  XXSRRKEKPQTEDEE----XXXXXXXXXXXXXXXXXKSRYESXXXXXXXXXXXXXXXXDN 477
              S+R+++   +D E                     +SRYE                  N
Sbjct: 929  SASKRRDRADIDDGEGGHGEKRRRKGGKRRKKEKSSRSRYEMEEADMMDDHDEPEDDDAN 988

Query: 476  HTSYGEQYNQTNEVEDKEDAPQDLLAAAGLEDSDADNDEAAPSNTNRRRRAWSESDEDEE 297
                   Y   ++ ++ E+  QD+LAAAGLEDSDAD+D AAPS+  RR+RAWSESDEDE 
Sbjct: 989  VNFREPGYQMNDQDDNAEENAQDVLAAAGLEDSDADDDAAAPSSAGRRKRAWSESDEDEI 1048

Query: 296  PLQRQPEA 273
              +R+P++
Sbjct: 1049 S-ERKPQS 1055


>ref|XP_004144025.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Cucumis
            sativus]
          Length = 1074

 Score = 1512 bits (3915), Expect = 0.0
 Identities = 778/1107 (70%), Positives = 897/1107 (81%), Gaps = 14/1107 (1%)
 Frame = -1

Query: 3521 MACVYIPVQNSEEEVRVALDQLPRDATDILDILKAEQAPLDLWLIIAREYFKQGKLEQFR 3342
            MACVYIPVQNSEEEVRVALDQLPRDA+DILDILKAEQAPLDLWLIIAREYFKQGKLEQFR
Sbjct: 1    MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKLEQFR 60

Query: 3341 QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEYFIQATKYYNKA 3162
            QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEE+FI AT+YYNKA
Sbjct: 61   QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA 120

Query: 3161 SRIDMHEPSTWIGKGQLLLAKGDVEQAFNAFKIVLDGDRDNVPALLGQACVHFNRGRYSD 2982
            SRIDMHEPSTW+GKGQLLL KG+VEQAF AFKIVLDGDRDNVPALLGQACV FNRG YS+
Sbjct: 121  SRIDMHEPSTWVGKGQLLLTKGEVEQAFAAFKIVLDGDRDNVPALLGQACVEFNRGHYSE 180

Query: 2981 ALELYKRALQVYPWAPS-VRVGIALCHYKLGRFEKAKQAFRRVLQLDPDNVEALVALGIS 2805
            +LELYKRALQVYP  P+ VR+GI LC Y+L ++ KA+QAF R   LDP+NVEALV L I 
Sbjct: 181  SLELYKRALQVYPDCPAAVRLGIGLCRYQLKQYGKAQQAFER---LDPENVEALVGLAII 237

Query: 2804 DLQTNEAGGIRSGMEKMQMAFEIYPYCAMSLNYLANHFFFTGQHFLVEQLTETALAVTMH 2625
            DL TNEAG IR+GMEKMQ AFEIYP+CAM+LNYLANHFFFTGQHFLVEQLTETALA+T H
Sbjct: 238  DLNTNEAGRIRNGMEKMQRAFEIYPFCAMALNYLANHFFFTGQHFLVEQLTETALAITNH 297

Query: 2624 GPTKAHSYYNLARSYHSKGDYEKAGMYYMASVKESNNAHEFVLPYYGLGQVQLKLGDLRS 2445
            GPTK+HS+YNLARSYHSKGDYEKAG+YYMAS KE+N   EFV PYYGLGQVQLK+GDLRS
Sbjct: 298  GPTKSHSFYNLARSYHSKGDYEKAGLYYMASAKEANKPREFVFPYYGLGQVQLKMGDLRS 357

Query: 2444 ALTNFEKVLEVQPENCDTLKALGHIYVQLEQNEKAQELYRKATKIDPRDPQAFLDLGDLL 2265
            AL+NFEKVLEV P+NC+TLK LGHIYVQL Q EKAQE  RKATKIDPRD QAFLDLG+LL
Sbjct: 358  ALSNFEKVLEVYPDNCETLKVLGHIYVQLGQAEKAQESLRKATKIDPRDAQAFLDLGELL 417

Query: 2264 ISTDINAALDAFKTARSLLKKGNEEVPLDLLNNIGVLHFERGEFELADEAFREALGEGIW 2085
            ISTD +AALDAFKTA  LLKKG +EVP+++LNN+GVLHFER EFELA+  F+EALG+GIW
Sbjct: 418  ISTDESAALDAFKTASILLKKGGQEVPIEVLNNLGVLHFEREEFELAERIFKEALGDGIW 477

Query: 2084 CDFFNAERESISNSEQTNAYGEQLSPSRRSRAKMIHSLRYP-VDADSVVRQYKDLQLFHR 1908
             DF + +                              +R P ++A + V QYKD++LF++
Sbjct: 478  LDFIDGK------------------------------VRCPAIEASASVLQYKDVELFYQ 507

Query: 1907 LEEQGLSVELPWDKVSALFNLARVQEQLHDTESASILYRLIIFKYPDYTDAYLRLAAMAK 1728
            LE +G ++ LPW KV++LFNLAR+ EQLH  E +S+LYRLI+FKYPDY DAYLRLA++AK
Sbjct: 508  LEREGRAIVLPWKKVTSLFNLARLLEQLHRIEVSSVLYRLILFKYPDYVDAYLRLASIAK 567

Query: 1727 ARNNVQISLELINDALKVDEKCTDALLMLGDLELKNDDWVKAKETFRTAKDSTDAKDSYA 1548
            ARN VQ+S+EL+NDALKV++KC++AL MLG+LELKNDDWV+AKETFR A ++TD KDSYA
Sbjct: 568  ARNYVQLSIELVNDALKVNDKCSNALSMLGELELKNDDWVRAKETFRAAGEATDGKDSYA 627

Query: 1547 AVCLGNWNYFAANRNEKRAPKLEATHYEKAKELYTKVLLQQSANLYAANGAGMVFAEKGQ 1368
             + LGNWNYFAA RNEKR PKLEATH EK+KELYT+VL+Q  ANLYAANGAG++ AEKGQ
Sbjct: 628  TLSLGNWNYFAALRNEKRNPKLEATHLEKSKELYTRVLVQHPANLYAANGAGVILAEKGQ 687

Query: 1367 FDIAKDLFTQVQEAASGSFNVQMPDVWINLAHVHFAQGNFALAVKMYENCSRKFFNNTDS 1188
            FD++KD+FTQVQEAASG+  VQMPDVWINLAHV+FAQGNF+LAVKMY+NC RKF+ NTD 
Sbjct: 688  FDVSKDIFTQVQEAASGNIFVQMPDVWINLAHVYFAQGNFSLAVKMYQNCLRKFYYNTDY 747

Query: 1187 QVLLYLARTHYEAEQWQDCKKTLLRAIHLAPSNYTLRFDAGVTLQKFSASTLSKTKRTVD 1008
            Q+LLYLART+YEAEQWQDCKKTLLRAIHLAPSNYTLRFDAGV +QKFSASTL KTKRT D
Sbjct: 748  QILLYLARTYYEAEQWQDCKKTLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTKRTAD 807

Query: 1007 EVRATVAELKNAVRLFSLLSAASNLHFHGFDETKIATHVAYCKHLLEAANVHCELAEREE 828
            EVR+TVAEL+NAVR+FS LSAASNLHFHGFDE KI THV YCKHLLEAA VH + AE EE
Sbjct: 808  EVRSTVAELENAVRVFSQLSAASNLHFHGFDEKKIDTHVGYCKHLLEAAGVHLKAAEHEE 867

Query: 827  MQNIQRLEVMRQMELADESRRKAEEQRKVQMEKRKQEDELKQVMQQEKHLERIKEQWKXX 648
             Q  QR E+ RQ+ LA+++RRKA+EQRK Q+E+RK EDE K++MQQE+H +R+KEQWK  
Sbjct: 868  QQIRQRQELARQVALAEDARRKADEQRKFQLERRKLEDEEKRMMQQEQHFKRVKEQWKSI 927

Query: 647  XXXSRRKEKPQTEDE---EXXXXXXXXXXXXXXXXXKSRYESXXXXXXXXXXXXXXXXDN 477
                RR+     +DE                     KS YE+                DN
Sbjct: 928  TPAKRRERSEIDDDEAGNSEKRRRKGGKRRKKDRKGKSHYETEEADNDMMDDQELYNEDN 987

Query: 476  HTSYGEQYNQTNEV-EDKEDAPQDLLAAAGLEDSDADNDEAAP-SNTNRRRRAWSESDED 303
            + SY E  +Q N+  +D E   QD LA AGLEDSDA+++  AP SN  RRR  WS+S+ED
Sbjct: 988  NISYRESRSQVNDQGDDFEGNDQDALAEAGLEDSDAEDEAGAPSSNAARRRATWSDSEED 1047

Query: 302  -------EEPLQRQPEADHMQESDGEV 243
                   E  LQR+  A  +++SDGE+
Sbjct: 1048 EPIDTQRESRLQRENSAG-LEDSDGEI 1073


>ref|XP_004161106.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase-associated protein
            CTR9 homolog [Cucumis sativus]
          Length = 1050

 Score = 1477 bits (3824), Expect = 0.0
 Identities = 763/1105 (69%), Positives = 877/1105 (79%), Gaps = 12/1105 (1%)
 Frame = -1

Query: 3521 MACVYIPVQNSEEEVRVALDQLPRDATDILDILKAEQAPLDLWLIIAREYFKQGKLEQFR 3342
            MACVYIPVQNSEEEVRVALDQLPRDA+DILDILKAEQAPLDLWLIIAREYFKQGKLEQFR
Sbjct: 1    MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKLEQFR 60

Query: 3341 QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEYFIQATKYYNKA 3162
            QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEE+FI AT+YYNKA
Sbjct: 61   QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA 120

Query: 3161 SRIDMHEPSTWIGKGQLLLAKGDVEQAFNAFKIVLDGDRDNVPALLGQACVHFNRGRYSD 2982
            SRIDMHEPSTW+GKGQLLL KG+VEQAF AFKIVLDGDRDNVPALLGQACV FNRG YS+
Sbjct: 121  SRIDMHEPSTWVGKGQLLLTKGEVEQAFAAFKIVLDGDRDNVPALLGQACVEFNRGHYSE 180

Query: 2981 ALELYKRALQVYPWAPSVRVGIALCHYKLGRFEKAKQAFRRVLQLDPDNVEALVALGISD 2802
            +LELYKRALQVYP  P+                           LDP+NVEALV L I D
Sbjct: 181  SLELYKRALQVYPDCPAA--------------------------LDPENVEALVGLAIID 214

Query: 2801 LQTNEAGGIRSGMEKMQMAFEIYPYCAMSLNYLANHFFFTGQHFLVEQLTETALAVTMHG 2622
            L TNEAG IR+GMEKMQ AFEIYP+CAM+LNYLANHFFFTGQHFLVEQLTETALA+T HG
Sbjct: 215  LNTNEAGRIRNGMEKMQRAFEIYPFCAMALNYLANHFFFTGQHFLVEQLTETALAITNHG 274

Query: 2621 PTKAHSYYNLARSYHSKGDYEKAGMYYMASVKESNNAHEFVLPYYGLGQVQLKLGDLRSA 2442
            PTK+HS+YNLARSYHSKGDYEKAG+YYMAS KE+N   EFV PYYGLGQVQLK+GDLRSA
Sbjct: 275  PTKSHSFYNLARSYHSKGDYEKAGLYYMASAKEANKPREFVFPYYGLGQVQLKMGDLRSA 334

Query: 2441 LTNFEKVLEVQPENCDTLKALGHIYVQLEQNEKAQELYRKATKIDPRDPQAFLDLGDLLI 2262
            L+NFEKVLEV P+NC+TLK LGHIYVQL Q EKAQE  RKATKIDPRD QAFLDLG+LLI
Sbjct: 335  LSNFEKVLEVYPDNCETLKVLGHIYVQLGQAEKAQESLRKATKIDPRDAQAFLDLGELLI 394

Query: 2261 STDINAALDAFKTARSLLKKGNEEVPLDLLNNIGVLHFERGEFELADEAFREALGEGIWC 2082
            STD +AALDAFKTA  LLKKG +EVP+++LNN+GVLHFER EFELA+  F+EALG+GIW 
Sbjct: 395  STDESAALDAFKTASILLKKGGQEVPIEVLNNLGVLHFEREEFELAERIFKEALGDGIWL 454

Query: 2081 DFFNAERESISNSEQTNAYGEQLSPSRRSRAKMIHSLRYPVDADSVVRQYKDLQLFHRLE 1902
            DF +               G+   P+              ++A + V QYKD++LF++LE
Sbjct: 455  DFID---------------GKVRCPA--------------IEASASVLQYKDVELFYQLE 485

Query: 1901 EQGLSVELPWDKVSALFNLARVQEQLHDTESASILYRLIIFKYPDYTDAYLRLAAMAKAR 1722
             +G ++ LPW KV++LFNLAR+ EQLH  E +S+LYRLI+FKYPDY DAYLRLA++AKAR
Sbjct: 486  REGRAIVLPWKKVTSLFNLARLLEQLHRIEVSSVLYRLILFKYPDYVDAYLRLASIAKAR 545

Query: 1721 NNVQISLELINDALKVDEKCTDALLMLGDLELKNDDWVKAKETFRTAKDSTDAKDSYAAV 1542
            N VQ+S+EL+NDALKV++KC++AL MLG+LE KNDDWV+AKETFR A ++TD KDSYA +
Sbjct: 546  NYVQLSIELVNDALKVNDKCSNALSMLGELEXKNDDWVRAKETFRAAGEATDGKDSYATL 605

Query: 1541 CLGNWNYFAANRNEKRAPKLEATHYEKAKELYTKVLLQQSANLYAANGAGMVFAEKGQFD 1362
             LGNWNYFAA RNEKR PKLEATH EK+KELYT+VL+Q  ANLYAANGAG++ AEKGQFD
Sbjct: 606  SLGNWNYFAALRNEKRNPKLEATHLEKSKELYTRVLVQHPANLYAANGAGVILAEKGQFD 665

Query: 1361 IAKDLFTQVQEAASGSFNVQMPDVWINLAHVHFAQGNFALAVKMYENCSRKFFNNTDSQV 1182
            ++KD+FTQVQEAASG+  VQMPDVWINLAHV+FAQGNF+LAVKMY+NC RKF+ NTD Q+
Sbjct: 666  VSKDIFTQVQEAASGNIFVQMPDVWINLAHVYFAQGNFSLAVKMYQNCLRKFYYNTDYQI 725

Query: 1181 LLYLARTHYEAEQWQDCKKTLLRAIHLAPSNYTLRFDAGVTLQKFSASTLSKTKRTVDEV 1002
            LLYLART+YEAEQWQDCKKTLLRAIHLAPSNYTLRFDAGV +QKFSASTL KTKRT DEV
Sbjct: 726  LLYLARTYYEAEQWQDCKKTLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTKRTADEV 785

Query: 1001 RATVAELKNAVRLFSLLSAASNLHFHGFDETKIATHVAYCKHLLEAANVHCELAEREEMQ 822
            R+TVAEL+NAVR+FS LSAASNLHFHGFDE KI THV YCKHLLEAA VH + AE EE Q
Sbjct: 786  RSTVAELENAVRVFSQLSAASNLHFHGFDEKKIDTHVGYCKHLLEAAGVHLKAAEHEEQQ 845

Query: 821  NIQRLEVMRQMELADESRRKAEEQRKVQMEKRKQEDELKQVMQQEKHLERIKEQWKXXXX 642
              QR E+ RQ+ LA+++RRKA+EQRK Q+E+RK EDE K++MQQE+H +R+KEQWK    
Sbjct: 846  IRQRQELARQVALAEDARRKADEQRKFQLERRKLEDEEKRMMQQEQHFKRVKEQWKSITP 905

Query: 641  XSRRKEKPQTEDE---EXXXXXXXXXXXXXXXXXKSRYESXXXXXXXXXXXXXXXXDNHT 471
              RR+     +DE                     KS YE+                DN+ 
Sbjct: 906  AKRRERSEIDDDEAGNSEKRRRKGGKRRKKDRKGKSHYETEEADNDMMDDQELYNEDNNI 965

Query: 470  SYGEQYNQTNEV-EDKEDAPQDLLAAAGLEDSDADNDEAAP-SNTNRRRRAWSESDED-- 303
            SY E  +Q N+  +D E   QD LA AGLEDSDA+++  AP SN  RRR  WS+S+ED  
Sbjct: 966  SYRESRSQVNDQGDDFEGNDQDALAEAGLEDSDAEDEAGAPSSNAARRRATWSDSEEDEP 1025

Query: 302  -----EEPLQRQPEADHMQESDGEV 243
                 E  LQR+  A  +++SDGE+
Sbjct: 1026 IDTQRESRLQRENSAG-LEDSDGEI 1049