BLASTX nr result

ID: Scutellaria23_contig00004327 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00004327
         (1370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303678.1| f-box family protein [Populus trichocarpa] g...   138   4e-30
ref|XP_002262703.1| PREDICTED: dof zinc finger protein DOF4.6-li...   129   2e-27
ref|XP_002518880.1| zinc finger protein, putative [Ricinus commu...   124   7e-26
dbj|BAG50071.1| transcription factor C2C2-Dof [Lotus japonicus]       119   2e-24
ref|XP_002299441.1| f-box family protein [Populus trichocarpa] g...   116   2e-23

>ref|XP_002303678.1| f-box family protein [Populus trichocarpa]
           gi|222841110|gb|EEE78657.1| f-box family protein
           [Populus trichocarpa]
          Length = 279

 Score =  138 bits (347), Expect = 4e-30
 Identities = 92/191 (48%), Positives = 113/191 (59%), Gaps = 10/191 (5%)
 Frame = +1

Query: 262 KKLPHLIPPHP-------NPTSKILQTQDLNLGFSIHHD---FNDMIHVPNYENAPTKHN 411
           KKLP LI P         NP  KI + QDLNL F        F+++I VP+      K+ 
Sbjct: 105 KKLPDLITPTSLSQTSTQNP--KIHEGQDLNLAFPSTQSIRSFSELIQVPSINENNNKNP 162

Query: 412 XXXXXXXXXXXXXXXXXXXXTGLTASRGLSSFMPPLPVATSTDPTSVVYSSDFPSLPDFK 591
                               TG++ SRGL+SF  P+PV    DP S +Y+S FP L DFK
Sbjct: 163 ISSSTSASTTTSQLSALELLTGIS-SRGLNSF--PMPVQ---DP-STLYTSSFP-LHDFK 214

Query: 592 PSLNFSLDGLGSNYATFQGVQETNGKLLFPFEDLKQVSANANEADHQHNRDHQHGAASTG 771
           P+LNFSLDGLGS Y + QGVQETNG+LLFPFEDLKQVS+    AD +HN++H     STG
Sbjct: 215 PTLNFSLDGLGSCYGSLQGVQETNGRLLFPFEDLKQVSST---ADIEHNKEH---GDSTG 268

Query: 772 YWNGVIGGGSW 804
           YW G++GGGSW
Sbjct: 269 YWTGMLGGGSW 279



 Score = 97.4 bits (241), Expect = 7e-18
 Identities = 41/42 (97%), Positives = 42/42 (100%)
 Frame = +3

Query: 3   CYYNNYSLSQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKR 128
           CYYNNYSL+QPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKR
Sbjct: 54  CYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKR 95


>ref|XP_002262703.1| PREDICTED: dof zinc finger protein DOF4.6-like [Vitis vinifera]
          Length = 288

 Score =  129 bits (323), Expect = 2e-27
 Identities = 85/193 (44%), Positives = 113/193 (58%), Gaps = 12/193 (6%)
 Frame = +1

Query: 262 KKLPHLIPPHPNPTS----KILQTQDLNLGFSIHHDF---NDMIHVPNYENAPTKHNXXX 420
           KKLP L+PP  + +S    KI + QDLNL F    DF   ++ + +P+ EN+    N   
Sbjct: 109 KKLPDLVPPGCSQSSAQNPKIHEGQDLNLSFPAAQDFRSVSEFMQMPSIENSNNNTNNSS 168

Query: 421 XXXXXXXXXXXXXXXXX---TGLTASRGLSSFMP-PLPVATSTDPTSVVYSSDFPSLPDF 588
                               TG+T SRGL+SFMP P+P     DP +V Y++ FP + +F
Sbjct: 169 KSHITSTSSTSSHLSALELLTGIT-SRGLNSFMPMPIP-----DPNTV-YTTGFP-MQEF 220

Query: 589 KPSLNFSLDGLGSNYATFQGVQ-ETNGKLLFPFEDLKQVSANANEADHQHNRDHQHGAAS 765
           KP+LNFSLDGLGS Y + QGVQ  ++G+LLFPFEDLKQVS+ A+     H    +    S
Sbjct: 221 KPTLNFSLDGLGSGYGSIQGVQGSSSGRLLFPFEDLKQVSSTAD-----HIEQTREQGDS 275

Query: 766 TGYWNGVIGGGSW 804
           TGYW G++GGGSW
Sbjct: 276 TGYWTGMLGGGSW 288



 Score = 96.7 bits (239), Expect = 1e-17
 Identities = 41/42 (97%), Positives = 41/42 (97%)
 Frame = +3

Query: 3   CYYNNYSLSQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKR 128
           CYYNNYSLSQPRYFCK CRRYWTEGGSLRNIPVGGGSRKNKR
Sbjct: 53  CYYNNYSLSQPRYFCKACRRYWTEGGSLRNIPVGGGSRKNKR 94


>ref|XP_002518880.1| zinc finger protein, putative [Ricinus communis]
           gi|223541867|gb|EEF43413.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 306

 Score =  124 bits (310), Expect = 7e-26
 Identities = 89/197 (45%), Positives = 110/197 (55%), Gaps = 16/197 (8%)
 Frame = +1

Query: 262 KKLPHLIPP----------HPNPTS-KILQTQDLNLGFSIHH---DFNDMIHVPNYENAP 399
           KKLP L+ P          +PN  S KI +  DLNL F        F+++I VP+     
Sbjct: 123 KKLPDLVTPQISLSQSSTQNPNNNSNKIPEGHDLNLAFPSTQGIRSFSELIQVPSINEGN 182

Query: 400 TKHNXXXXXXXXXXXXXXXXXXXXTGLTASRGLSSFMPPLPVATSTDPTSVVYSSDFPSL 579
              N                    TG++ SRGL+SFMP +PV    DP SV Y+S FP L
Sbjct: 183 NNKNPSSTSNTTTSSQLSALELL-TGIS-SRGLNSFMP-MPVQ---DPNSV-YTSGFP-L 234

Query: 580 PDFKPSLNFSLDGLGSNYATFQGVQETNGKLLFPFEDLKQVSANANEADHQHNRDHQHGA 759
            DFKP+LNFSLDGLGS Y + QGVQET G+LLFPFEDLKQVS+ +   D + NR+     
Sbjct: 235 QDFKPTLNFSLDGLGSGYGSLQGVQETGGRLLFPFEDLKQVSSTS--TDIEQNREQ---G 289

Query: 760 ASTGYWNGVI--GGGSW 804
            S GYW G++  GGGSW
Sbjct: 290 DSAGYWTGMLGGGGGSW 306



 Score = 97.4 bits (241), Expect = 7e-18
 Identities = 41/42 (97%), Positives = 42/42 (100%)
 Frame = +3

Query: 3   CYYNNYSLSQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKR 128
           CYYNNYSL+QPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKR
Sbjct: 60  CYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKR 101


>dbj|BAG50071.1| transcription factor C2C2-Dof [Lotus japonicus]
          Length = 275

 Score =  119 bits (297), Expect = 2e-24
 Identities = 80/189 (42%), Positives = 107/189 (56%), Gaps = 8/189 (4%)
 Frame = +1

Query: 262 KKLPHLIPPHPNPTSKILQT-QDLNLGFSIHHDFNDMIHVPNYENAPTKHNXXXXXXXXX 438
           K LP L+ P   P  KI    QDLNLGF      ++++H  N        N         
Sbjct: 102 KNLPDLVTPTCTPNPKIFNDGQDLNLGFP---KISELVHQNN--------NTSFCSTTTS 150

Query: 439 XXXXXXXXXXXTGLTAS----RGLSSFMPPLPVATSTDPTSVVYSSDFPSLPDFKPSLNF 606
                      TG+T+S    RGL     P+PV  S DP +V  +  FP + DFKP+LNF
Sbjct: 151 STSHLSALGLLTGITSSSSSSRGLQYSFMPVPV--SADPNTVYTTCGFP-MHDFKPTLNF 207

Query: 607 SLDGLGSNYATFQG-VQETN-GKLLFPFEDLKQVSANANEADHQHNRDHQHGAASTGYWN 780
           +LDG GS+YA+FQG VQ+T+ G++LFPFEDLKQVS+     DH ++++ Q G  S GYW+
Sbjct: 208 TLDGNGSDYASFQGHVQDTSTGRVLFPFEDLKQVSSTTARMDHNNDKEVQQG-DSAGYWS 266

Query: 781 GVI-GGGSW 804
           G++ GGGSW
Sbjct: 267 GMLGGGGSW 275



 Score = 95.5 bits (236), Expect = 3e-17
 Identities = 40/41 (97%), Positives = 41/41 (100%)
 Frame = +3

Query: 3   CYYNNYSLSQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNK 125
           CYYNNYSL+QPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNK
Sbjct: 46  CYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNK 86


>ref|XP_002299441.1| f-box family protein [Populus trichocarpa]
           gi|222846699|gb|EEE84246.1| f-box family protein
           [Populus trichocarpa]
          Length = 247

 Score =  116 bits (290), Expect = 2e-23
 Identities = 85/186 (45%), Positives = 104/186 (55%), Gaps = 5/186 (2%)
 Frame = +1

Query: 262 KKLPHLI-PPHPNPTS----KILQTQDLNLGFSIHHDFNDMIHVPNYENAPTKHNXXXXX 426
           KKLP LI PP  + TS    KI + QDLNL F            P+ +   T        
Sbjct: 105 KKLPDLISPPTLSQTSTENHKIHEGQDLNLAF------------PSTQGIRTLE------ 146

Query: 427 XXXXXXXXXXXXXXXTGLTASRGLSSFMPPLPVATSTDPTSVVYSSDFPSLPDFKPSLNF 606
                          TG++ SRGL+SF  P+PV    DP S +Y S FP L DFKP+L+F
Sbjct: 147 -------------LLTGIS-SRGLNSF--PMPV--HQDP-STLYPSGFP-LQDFKPTLSF 186

Query: 607 SLDGLGSNYATFQGVQETNGKLLFPFEDLKQVSANANEADHQHNRDHQHGAASTGYWNGV 786
           SLDGLGS Y   QGV ETNG+LLFPFEDLKQ  ++   AD + N++H     STGYW G+
Sbjct: 187 SLDGLGSGYGDLQGVHETNGRLLFPFEDLKQQVSST--ADIEQNKEH---GDSTGYWTGM 241

Query: 787 IGGGSW 804
           +GGGSW
Sbjct: 242 LGGGSW 247



 Score = 95.5 bits (236), Expect = 3e-17
 Identities = 40/42 (95%), Positives = 42/42 (100%)
 Frame = +3

Query: 3   CYYNNYSLSQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKR 128
           CYYNNYSL+QPRYFCKTCRRYWTEGGSLR+IPVGGGSRKNKR
Sbjct: 54  CYYNNYSLTQPRYFCKTCRRYWTEGGSLRSIPVGGGSRKNKR 95


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