BLASTX nr result

ID: Scutellaria23_contig00004302 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00004302
         (787 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301259.1| predicted protein [Populus trichocarpa] gi|2...   260   3e-67
ref|XP_004155261.1| PREDICTED: CCR4-NOT transcription complex su...   251   1e-64
ref|XP_002270543.2| PREDICTED: CCR4-NOT transcription complex su...   247   2e-63
emb|CBI24630.3| unnamed protein product [Vitis vinifera]              247   2e-63
ref|XP_004134286.1| PREDICTED: LOW QUALITY PROTEIN: CCR4-NOT tra...   246   3e-63

>ref|XP_002301259.1| predicted protein [Populus trichocarpa] gi|222842985|gb|EEE80532.1|
           predicted protein [Populus trichocarpa]
          Length = 1987

 Score =  260 bits (664), Expect = 3e-67
 Identities = 134/225 (59%), Positives = 165/225 (73%)
 Frame = -2

Query: 675 MIPFSSKVSSQIRFLLQSLNDSNFDSVFQELCKYGMYGMEGSILLLQACLDNINIYGKDL 496
           MI  SS V SQIRFLL SLN++N DSVF++LC++  Y +EGSIL LQ CLD +     DL
Sbjct: 1   MIELSSTVPSQIRFLLHSLNEANVDSVFRDLCQFMEYELEGSILTLQTCLDYLKT---DL 57

Query: 495 KNMKPHPIYASIFKHILDKPNFCTIFSESLRTVAINEDLVQDLSGALQLSVPEKIGIGLA 316
           KNM   P+ AS+FK +LDKPNF T+F +SL++  I ED ++ LS  L+LSV EKIG GLA
Sbjct: 58  KNMHLEPVLASVFKFVLDKPNFATVFCQSLKSTEITEDFLEKLSNLLKLSVAEKIGTGLA 117

Query: 315 LSNSEEHDIRMCGKNFCMGQIAELCANPVAVESTELIQHILMFLSRSEGLSKHVDSFMQM 136
           LS SE  D RM  K FC+ +I ELCANPV + S E IQ+I+MFL RSEGLSKHVD+FMQM
Sbjct: 118 LSESENADTRMFAKKFCLAKIEELCANPVPMNSVEQIQNIVMFLQRSEGLSKHVDNFMQM 177

Query: 135 LSLIQLKDEAQFVLAPFLSDELRADNFFRHLDLLNEGGDDDFDAI 1
           LSL+Q KD   FVL P +SDELR  NF R++DL++   D +FDAI
Sbjct: 178 LSLMQSKDVVPFVLTPLISDELREANFLRNMDLIHGSTDSEFDAI 222


>ref|XP_004155261.1| PREDICTED: CCR4-NOT transcription complex subunit 1-like [Cucumis
           sativus]
          Length = 962

 Score =  251 bits (641), Expect = 1e-64
 Identities = 126/225 (56%), Positives = 172/225 (76%)
 Frame = -2

Query: 675 MIPFSSKVSSQIRFLLQSLNDSNFDSVFQELCKYGMYGMEGSILLLQACLDNINIYGKDL 496
           M+ FS+  SSQIRFLL SL +SN +SV +EL ++   G+EGS +LL+ CLD+   +G DL
Sbjct: 1   MLMFSTATSSQIRFLLHSLTESNAESVLKELSEFIDCGIEGSFILLRTCLDHFTSHGTDL 60

Query: 495 KNMKPHPIYASIFKHILDKPNFCTIFSESLRTVAINEDLVQDLSGALQLSVPEKIGIGLA 316
           +N     + +S+FKH+LD+PNF TI  ESL++  IN+  ++++S  L LS+ E+IG+GLA
Sbjct: 61  ENPLLLLVISSVFKHLLDRPNFSTILCESLKSRDINQVTLENISNLLNLSMCERIGVGLA 120

Query: 315 LSNSEEHDIRMCGKNFCMGQIAELCANPVAVESTELIQHILMFLSRSEGLSKHVDSFMQM 136
           +S+SE  D R+CGKNFC+ QI ELCAN V+V+ST+ IQ I+MFL RSEGLSKH+DSFMQM
Sbjct: 121 VSDSENLDARLCGKNFCISQIEELCANAVSVDSTQQIQDIIMFLQRSEGLSKHLDSFMQM 180

Query: 135 LSLIQLKDEAQFVLAPFLSDELRADNFFRHLDLLNEGGDDDFDAI 1
           LSL+QLKD  +FVL+P LSDELR + F R ++L +E  D+DFD+I
Sbjct: 181 LSLVQLKDVTEFVLSPLLSDELREEKFLRDVNLSHESLDNDFDSI 225


>ref|XP_002270543.2| PREDICTED: CCR4-NOT transcription complex subunit 1-like [Vitis
           vinifera]
          Length = 1586

 Score =  247 bits (631), Expect = 2e-63
 Identities = 126/227 (55%), Positives = 168/227 (74%), Gaps = 5/227 (2%)
 Frame = -2

Query: 666 FSSKVSSQIRFLLQSLNDSNFDSVF----QELCKYGMYGMEGSILLLQACLDNINIYGKD 499
           FSS +SSQIRFLL  LNDSNFDS F    +ELC++  YG E SILLLQ CLD++N +G D
Sbjct: 178 FSSLISSQIRFLLHGLNDSNFDSNFDSVVRELCQFIEYGYEASILLLQTCLDHMNFHGGD 237

Query: 498 LKNMKPHP-IYASIFKHILDKPNFCTIFSESLRTVAINEDLVQDLSGALQLSVPEKIGIG 322
           + +M+  P + A+IF+++LDKPNF T+  E+LR+  I E  + +    LQ SV EKIG+G
Sbjct: 238 MNDMQLKPDVLAAIFRYLLDKPNFSTVLCEALRSSVIGEGFLGEFCNVLQFSVSEKIGLG 297

Query: 321 LALSNSEEHDIRMCGKNFCMGQIAELCANPVAVESTELIQHILMFLSRSEGLSKHVDSFM 142
           LAL++SE  D+R  G+NFCM QI +LC NP +++S E IQ I+MFL +SEGLSKHVDSFM
Sbjct: 298 LALADSENGDVRTSGQNFCMRQIEKLCGNPASIDSHEKIQKIIMFLYQSEGLSKHVDSFM 357

Query: 141 QMLSLIQLKDEAQFVLAPFLSDELRADNFFRHLDLLNEGGDDDFDAI 1
           QMLSL++ K+   FVLAP LSD+L  D+F R+LDL  +  +++FD+I
Sbjct: 358 QMLSLMEFKERPPFVLAPLLSDDLHEDSFSRNLDLFYDFSENEFDSI 404


>emb|CBI24630.3| unnamed protein product [Vitis vinifera]
          Length = 1496

 Score =  247 bits (631), Expect = 2e-63
 Identities = 126/227 (55%), Positives = 168/227 (74%), Gaps = 5/227 (2%)
 Frame = -2

Query: 666 FSSKVSSQIRFLLQSLNDSNFDSVF----QELCKYGMYGMEGSILLLQACLDNINIYGKD 499
           FSS +SSQIRFLL  LNDSNFDS F    +ELC++  YG E SILLLQ CLD++N +G D
Sbjct: 5   FSSLISSQIRFLLHGLNDSNFDSNFDSVVRELCQFIEYGYEASILLLQTCLDHMNFHGGD 64

Query: 498 LKNMKPHP-IYASIFKHILDKPNFCTIFSESLRTVAINEDLVQDLSGALQLSVPEKIGIG 322
           + +M+  P + A+IF+++LDKPNF T+  E+LR+  I E  + +    LQ SV EKIG+G
Sbjct: 65  MNDMQLKPDVLAAIFRYLLDKPNFSTVLCEALRSSVIGEGFLGEFCNVLQFSVSEKIGLG 124

Query: 321 LALSNSEEHDIRMCGKNFCMGQIAELCANPVAVESTELIQHILMFLSRSEGLSKHVDSFM 142
           LAL++SE  D+R  G+NFCM QI +LC NP +++S E IQ I+MFL +SEGLSKHVDSFM
Sbjct: 125 LALADSENGDVRTSGQNFCMRQIEKLCGNPASIDSHEKIQKIIMFLYQSEGLSKHVDSFM 184

Query: 141 QMLSLIQLKDEAQFVLAPFLSDELRADNFFRHLDLLNEGGDDDFDAI 1
           QMLSL++ K+   FVLAP LSD+L  D+F R+LDL  +  +++FD+I
Sbjct: 185 QMLSLMEFKERPPFVLAPLLSDDLHEDSFSRNLDLFYDFSENEFDSI 231


>ref|XP_004134286.1| PREDICTED: LOW QUALITY PROTEIN: CCR4-NOT transcription complex
           subunit 1-like [Cucumis sativus]
          Length = 2427

 Score =  246 bits (629), Expect = 3e-63
 Identities = 126/226 (55%), Positives = 172/226 (76%), Gaps = 1/226 (0%)
 Frame = -2

Query: 675 MIPFSSKVSSQIRFLLQSLNDSNFDSVFQELCKYGMYGMEGSILLLQACLDNINIYGKDL 496
           M+ FS+  SSQIRFLL SL +SN +SV +EL ++   G+EGS +LL+ CLD+   +G DL
Sbjct: 1   MLMFSTATSSQIRFLLHSLTESNAESVLKELSEFIDCGIEGSFILLRTCLDHFTSHGTDL 60

Query: 495 KNMKPHPIYASIFKHILDKPNFCTIFSESLRTVAINEDLVQDLSGALQLSVPEKIGIGLA 316
           +N     + +S+FKH+LD+PNF TI  ESL++  IN+  ++++S  L LS+ E+IG+GLA
Sbjct: 61  ENPLLLLVISSVFKHLLDRPNFSTILCESLKSRDINQVTLENISNLLNLSMCERIGVGLA 120

Query: 315 LSNSEEHDIRMCGKNFCMGQIAELCANPVAVESTELIQHILMFLSRSEGLSKHVDSFMQM 136
           +S+SE  D R+CGKNFC+ QI ELCAN V+V+ST+ IQ I+MFL RSEGLSKH+DSFMQM
Sbjct: 121 VSDSENLDARLCGKNFCISQIEELCANAVSVDSTQQIQDIIMFLQRSEGLSKHLDSFMQM 180

Query: 135 LSLIQLKDEAQFVLAPFLSDELRADNFFR-HLDLLNEGGDDDFDAI 1
           LSL+QLKD  +FVL+P LSDELR + F R  ++L +E  D+DFD+I
Sbjct: 181 LSLVQLKDVTEFVLSPLLSDELREEKFLRWDVNLSHESLDNDFDSI 226


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