BLASTX nr result

ID: Scutellaria23_contig00004253 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00004253
         (1147 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276349.2| PREDICTED: 50S ribosomal protein L25-like [V...   188   4e-95
ref|XP_002272347.1| PREDICTED: 50S ribosomal protein L25 [Vitis ...   188   7e-95
gb|ABP88855.1| ribosomal protein L25 [Nicotiana benthamiana]          180   2e-89
gb|ACC91264.1| 50S ribosomal protein [Capsella rubella]               184   3e-88
ref|XP_004136661.1| PREDICTED: 50S ribosomal protein L25-like [C...   177   6e-88

>ref|XP_002276349.2| PREDICTED: 50S ribosomal protein L25-like [Vitis vinifera]
           gi|297735240|emb|CBI17602.3| unnamed protein product
           [Vitis vinifera]
          Length = 258

 Score =  188 bits (477), Expect(2) = 4e-95
 Identities = 94/111 (84%), Positives = 100/111 (90%)
 Frame = -2

Query: 576 GTDAVLNVTFIRAPSSAWLKVDVPLVFIGEDVSPGLKKGSPLNIIKRTVKYLCPADIVPP 397
           GTDAVLNVTFIRAPS A LKVDVPLVF GEDVSPGLKKG+ LN IKRTVKYLCPADI+PP
Sbjct: 148 GTDAVLNVTFIRAPSHALLKVDVPLVFRGEDVSPGLKKGAYLNTIKRTVKYLCPADIIPP 207

Query: 396 YIEVDLSELDVGQKIIAGNLKVHPALKLLRSNDEAVCKIMSARVSDQKKSK 244
           YI+VDLSELD GQKI+ G+LKVHPALKLLRS DE VCKIM  RVSDQ+KSK
Sbjct: 208 YIDVDLSELDAGQKIVMGDLKVHPALKLLRSKDEPVCKIMGTRVSDQRKSK 258



 Score =  187 bits (476), Expect(2) = 4e-95
 Identities = 96/136 (70%), Positives = 110/136 (80%), Gaps = 3/136 (2%)
 Frame = -1

Query: 1033 RRVATFQHHLRSFS---TAVLLQEFETPPLFTYLEGFPRPDSKYDETIHAIPRAVSGKNI 863
            R++ T   HLR FS    A +LQ+   PP  TYLEGFPRPD K+ E I AIPR +SGKNI
Sbjct: 7    RQILTNALHLRHFSQSAAAAVLQDPLEPPPLTYLEGFPRPDPKFAEIIRAIPRTISGKNI 66

Query: 862  SAKERKAGRVPSIVFEAEDGQHGGNKRLISVQNNQIKKLVNHLGQSFFLARLFDLEVRSE 683
            SAKERK GRVPSIVFE EDGQHGGNKRLISV+ NQI+KLVNHLG+SFFL+RLFDLEV  +
Sbjct: 67   SAKERKVGRVPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSRLFDLEVGPD 126

Query: 682  FGSDEIVEKVRVLPRK 635
            F S+E++EKVRVLPRK
Sbjct: 127  FESNEVIEKVRVLPRK 142


>ref|XP_002272347.1| PREDICTED: 50S ribosomal protein L25 [Vitis vinifera]
           gi|297742259|emb|CBI34408.3| unnamed protein product
           [Vitis vinifera]
          Length = 258

 Score =  188 bits (477), Expect(2) = 7e-95
 Identities = 94/111 (84%), Positives = 100/111 (90%)
 Frame = -2

Query: 576 GTDAVLNVTFIRAPSSAWLKVDVPLVFIGEDVSPGLKKGSPLNIIKRTVKYLCPADIVPP 397
           GTDAVLNVTFIRAPS A LKVDVPLVF GEDVSPGLKKG+ LN IKRTVKYLCPADI+PP
Sbjct: 148 GTDAVLNVTFIRAPSHALLKVDVPLVFRGEDVSPGLKKGAYLNTIKRTVKYLCPADIIPP 207

Query: 396 YIEVDLSELDVGQKIIAGNLKVHPALKLLRSNDEAVCKIMSARVSDQKKSK 244
           YI+VDLSELD GQKI+ G+LKVHPALKLLRS DE VCKIM  RVSDQ+KSK
Sbjct: 208 YIDVDLSELDAGQKIVMGDLKVHPALKLLRSKDEPVCKIMGTRVSDQRKSK 258



 Score =  187 bits (474), Expect(2) = 7e-95
 Identities = 96/136 (70%), Positives = 109/136 (80%), Gaps = 3/136 (2%)
 Frame = -1

Query: 1033 RRVATFQHHLRSFS---TAVLLQEFETPPLFTYLEGFPRPDSKYDETIHAIPRAVSGKNI 863
            R++ T   HLR FS    A +LQ+   PP  TYLEGFPRPD K+ E I AIPR +SGKNI
Sbjct: 7    RQILTNALHLRHFSQSAAAAVLQDPLEPPPLTYLEGFPRPDPKFAEIIRAIPRTISGKNI 66

Query: 862  SAKERKAGRVPSIVFEAEDGQHGGNKRLISVQNNQIKKLVNHLGQSFFLARLFDLEVRSE 683
            SAKERK GRVPSIVFE EDGQHGGNKRLISV+ NQI+KLVNHLG+SFFL+RLFDLEV   
Sbjct: 67   SAKERKVGRVPSIVFEQEDGQHGGNKRLISVKTNQIRKLVNHLGRSFFLSRLFDLEVGPH 126

Query: 682  FGSDEIVEKVRVLPRK 635
            F S+E++EKVRVLPRK
Sbjct: 127  FESNEVIEKVRVLPRK 142


>gb|ABP88855.1| ribosomal protein L25 [Nicotiana benthamiana]
          Length = 251

 Score =  180 bits (457), Expect(2) = 2e-89
 Identities = 89/111 (80%), Positives = 100/111 (90%)
 Frame = -2

Query: 576 GTDAVLNVTFIRAPSSAWLKVDVPLVFIGEDVSPGLKKGSPLNIIKRTVKYLCPADIVPP 397
           G+DA LNVTFIRAPSSA LKVDVPL+F GEDVSPGLKKGS LNIIKRTVKYLCPAD++PP
Sbjct: 141 GSDAPLNVTFIRAPSSALLKVDVPLIFRGEDVSPGLKKGSYLNIIKRTVKYLCPADVIPP 200

Query: 396 YIEVDLSELDVGQKIIAGNLKVHPALKLLRSNDEAVCKIMSARVSDQKKSK 244
           YI+VDLSELDVGQK++ G+LKVHPALKL++  D  V KIM ARVSDQKK+K
Sbjct: 201 YIDVDLSELDVGQKLVMGDLKVHPALKLVQPKDHPVVKIMGARVSDQKKAK 251



 Score =  176 bits (447), Expect(2) = 2e-89
 Identities = 97/140 (69%), Positives = 106/140 (75%), Gaps = 4/140 (2%)
 Frame = -1

Query: 1042 MLIRRVAT----FQHHLRSFSTAVLLQEFETPPLFTYLEGFPRPDSKYDETIHAIPRAVS 875
            MLIRRVA       +HLR FS +        P        FP+PD KYDETIHAI RA S
Sbjct: 1    MLIRRVALTASLHHYHLRFFSNSAAAVVLPYPE-----PEFPKPDPKYDETIHAIARAKS 55

Query: 874  GKNISAKERKAGRVPSIVFEAEDGQHGGNKRLISVQNNQIKKLVNHLGQSFFLARLFDLE 695
            GKNI+AKERKAGRVPSIVFE EDGQHGGNKRLISVQ NQI+KLVNHLG+S FL+RLFDLE
Sbjct: 56   GKNIAAKERKAGRVPSIVFEQEDGQHGGNKRLISVQANQIRKLVNHLGRSHFLSRLFDLE 115

Query: 694  VRSEFGSDEIVEKVRVLPRK 635
            VR +F S E+VEKVRVLPRK
Sbjct: 116  VRPDFDSVEVVEKVRVLPRK 135


>gb|ACC91264.1| 50S ribosomal protein [Capsella rubella]
          Length = 257

 Score =  184 bits (466), Expect(2) = 3e-88
 Identities = 96/141 (68%), Positives = 110/141 (78%), Gaps = 6/141 (4%)
 Frame = -1

Query: 1042 MLIRRVATFQ---HHLRSFS---TAVLLQEFETPPLFTYLEGFPRPDSKYDETIHAIPRA 881
            ML+RRV T      +LR FS   TA L  +       TYL GFPRPD KY ETI A+PR+
Sbjct: 1    MLLRRVTTLPKTLQNLRLFSPAATAALALDHSLDTQLTYLPGFPRPDPKYAETILAVPRS 60

Query: 880  VSGKNISAKERKAGRVPSIVFEAEDGQHGGNKRLISVQNNQIKKLVNHLGQSFFLARLFD 701
            VSGK+ISAKERKAGRVPSI+FE EDGQHGGNKRL+SVQ NQI+KLV HLG SFFL+RLFD
Sbjct: 61   VSGKSISAKERKAGRVPSIIFEQEDGQHGGNKRLVSVQTNQIRKLVTHLGYSFFLSRLFD 120

Query: 700  LEVRSEFGSDEIVEKVRVLPR 638
            +EVR+E GSDE++EKVR LPR
Sbjct: 121  VEVRAEIGSDEVIEKVRALPR 141



 Score =  169 bits (428), Expect(2) = 3e-88
 Identities = 80/109 (73%), Positives = 95/109 (87%)
 Frame = -2

Query: 576 GTDAVLNVTFIRAPSSAWLKVDVPLVFIGEDVSPGLKKGSPLNIIKRTVKYLCPADIVPP 397
           GTDA LNVTFIRAP  A LKVD+PLVFIG+DVSPGLKKG+ LN IKRTVK+LCPA+I+PP
Sbjct: 148 GTDAPLNVTFIRAPPGALLKVDIPLVFIGDDVSPGLKKGASLNTIKRTVKFLCPAEIIPP 207

Query: 396 YIEVDLSELDVGQKIIAGNLKVHPALKLLRSNDEAVCKIMSARVSDQKK 250
           YIEVDLS+LD+GQK++ G+LKVHPALKL++  DE + KI   RVSDQ+K
Sbjct: 208 YIEVDLSQLDIGQKLVMGDLKVHPALKLIKPKDEPIVKIAGGRVSDQQK 256


>ref|XP_004136661.1| PREDICTED: 50S ribosomal protein L25-like [Cucumis sativus]
           gi|449494761|ref|XP_004159639.1| PREDICTED: 50S
           ribosomal protein L25-like [Cucumis sativus]
          Length = 260

 Score =  177 bits (450), Expect(2) = 6e-88
 Identities = 91/112 (81%), Positives = 99/112 (88%), Gaps = 1/112 (0%)
 Frame = -2

Query: 576 GTDAVLNVTFIRAPSSAWLKVDVPLVFIGEDVSPGLKKGSPLNIIKRTVKYLCPADIVPP 397
           GTDA LNVTFIRAPS A LKVDVPLVF GEDV PGL+KGS LN IKRTVKYLCPADI+PP
Sbjct: 149 GTDAPLNVTFIRAPSHAVLKVDVPLVFRGEDVCPGLRKGSYLNTIKRTVKYLCPADIIPP 208

Query: 396 YIEVDLSELDVGQKIIAGNLKVHPALKLLRSNDEAVCKIMSARVSD-QKKSK 244
           YI+VDLSELDVGQK++ G+LKVHPALKL++S DE VCKI  ARVSD QKKSK
Sbjct: 209 YIDVDLSELDVGQKLVMGDLKVHPALKLVKSKDEPVCKIAGARVSDQQKKSK 260



 Score =  174 bits (441), Expect(2) = 6e-88
 Identities = 87/108 (80%), Positives = 98/108 (90%)
 Frame = -1

Query: 958 PLFTYLEGFPRPDSKYDETIHAIPRAVSGKNISAKERKAGRVPSIVFEAEDGQHGGNKRL 779
           PLF+YLEGFP+PD KY ETI AIPR++SGK+ISAKERKAGRVPSIVFE EDGQHGGNKRL
Sbjct: 36  PLFSYLEGFPKPDPKYAETILAIPRSISGKSISAKERKAGRVPSIVFEQEDGQHGGNKRL 95

Query: 778 ISVQNNQIKKLVNHLGQSFFLARLFDLEVRSEFGSDEIVEKVRVLPRK 635
           ISV+ NQI KLV +LG+SFFL+RLFDLEV S+F S +IVEKVRVLPRK
Sbjct: 96  ISVRTNQIVKLVKNLGRSFFLSRLFDLEVLSDFESGDIVEKVRVLPRK 143


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