BLASTX nr result

ID: Scutellaria23_contig00004222 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00004222
         (575 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003603321.1| 60S ribosomal protein L39 [Medicago truncatu...   100   1e-19
pdb|3IZR|OO Chain o, Localization Of The Large Subunit Ribosomal...   100   2e-19
ref|NP_001174637.1| Os06g0181566 [Oryza sativa Japonica Group] g...   100   2e-19
emb|CBI25619.3| unnamed protein product [Vitis vinifera]              100   2e-19
emb|CBI25617.3| unnamed protein product [Vitis vinifera]              100   2e-19

>ref|XP_003603321.1| 60S ribosomal protein L39 [Medicago truncatula]
           gi|355492369|gb|AES73572.1| 60S ribosomal protein L39
           [Medicago truncatula] gi|388513831|gb|AFK44977.1|
           unknown [Medicago truncatula]
           gi|388516927|gb|AFK46525.1| unknown [Medicago
           truncatula]
          Length = 51

 Score =  100 bits (250), Expect = 1e-19
 Identities = 45/47 (95%), Positives = 46/47 (97%)
 Frame = +1

Query: 142 HKTFMIKKKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLG 282
           HKTF+IKKKLAKK RQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLG
Sbjct: 4   HKTFVIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLG 50


>pdb|3IZR|OO Chain o, Localization Of The Large Subunit Ribosomal Proteins Into
           A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s
           Ribosome gi|57471714|gb|AAW50988.1| ribosomal protein
           L39 [Triticum aestivum] gi|326487816|dbj|BAK05580.1|
           predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326492163|dbj|BAJ98306.1| predicted protein [Hordeum
           vulgare subsp. vulgare] gi|326511663|dbj|BAJ91976.1|
           predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 51

 Score =  100 bits (249), Expect = 2e-19
 Identities = 45/47 (95%), Positives = 46/47 (97%)
 Frame = +1

Query: 142 HKTFMIKKKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLG 282
           HKTF IK+KLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLG
Sbjct: 4   HKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLG 50


>ref|NP_001174637.1| Os06g0181566 [Oryza sativa Japonica Group]
           gi|75251551|sp|Q5SMI4.1|RL393_ORYSJ RecName: Full=60S
           ribosomal protein L39-3 gi|55771364|dbj|BAD72315.1| 60S
           ribosomal protein L39 [Oryza sativa Japonica Group]
           gi|55773789|dbj|BAD72572.1| 60S ribosomal protein L39
           [Oryza sativa Japonica Group]
           gi|125554313|gb|EAY99918.1| hypothetical protein
           OsI_21918 [Oryza sativa Indica Group]
           gi|125596264|gb|EAZ36044.1| hypothetical protein
           OsJ_20351 [Oryza sativa Japonica Group]
           gi|255676783|dbj|BAH93365.1| Os06g0181566 [Oryza sativa
           Japonica Group]
          Length = 51

 Score =  100 bits (249), Expect = 2e-19
 Identities = 45/47 (95%), Positives = 45/47 (95%)
 Frame = +1

Query: 142 HKTFMIKKKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLG 282
           HKTF IKKKLAKK RQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLG
Sbjct: 4   HKTFQIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLG 50


>emb|CBI25619.3| unnamed protein product [Vitis vinifera]
          Length = 72

 Score =  100 bits (249), Expect = 2e-19
 Identities = 45/47 (95%), Positives = 46/47 (97%)
 Frame = +1

Query: 142 HKTFMIKKKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLG 282
           HKTFMIKKKLAKK RQNRPIP+WIRMRTDNTIRYNAKRRHWRRTKLG
Sbjct: 25  HKTFMIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLG 71


>emb|CBI25617.3| unnamed protein product [Vitis vinifera]
          Length = 70

 Score =  100 bits (249), Expect = 2e-19
 Identities = 45/47 (95%), Positives = 46/47 (97%)
 Frame = +1

Query: 142 HKTFMIKKKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLG 282
           HKTFMIKKKLAKK RQNRPIP+WIRMRTDNTIRYNAKRRHWRRTKLG
Sbjct: 23  HKTFMIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLG 69


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