BLASTX nr result
ID: Scutellaria23_contig00004017
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Scutellaria23_contig00004017
(2052 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAT08172.1| Hin19 [Nicotiana tabacum] 156 4e-52
emb|CAJ44458.1| ALY protein [Nicotiana benthamiana] 156 5e-52
ref|XP_002531919.1| RNA and export factor binding protein, putat... 163 7e-52
ref|XP_002276497.1| PREDICTED: THO complex subunit 4 [Vitis vini... 154 5e-50
ref|XP_003600720.1| THO complex subunit [Medicago truncatula] gi... 157 5e-50
>gb|AAT08172.1| Hin19 [Nicotiana tabacum]
Length = 219
Score = 156 bits (394), Expect(2) = 4e-52
Identities = 92/164 (56%), Positives = 109/164 (66%), Gaps = 3/164 (1%)
Frame = +2
Query: 1328 ELFSEIGELIRYAIHFDKNGRPSGSAEVVFARRSDAFQALKRYNNVQLDGKPMKIEIIGA 1507
ELFSEIGELIRYAIH+DKNGRPSG+AEVVFARRSDA+QA KRYNNVQLDGKPMKIE++
Sbjct: 58 ELFSEIGELIRYAIHYDKNGRPSGAAEVVFARRSDAYQAHKRYNNVQLDGKPMKIEVVAP 117
Query: 1508 NAEIPLSARVNVVGAANGRKRTVVMASRPIRTRGGGFASSNRGSVQXXXXXXXXXXXXXX 1687
+ +PLSARV+ VG +GR RTVV R RG A++NRGS Q
Sbjct: 118 STGMPLSARVD-VGRGSGR-RTVVTLPGSARGRGAASAAANRGSSQRGRGGFGNASGRWR 175
Query: 1688 XXXXXXXXXXXXXAQWKKK-TEKSADDLDKELDSYH--AEAMQT 1810
+ +K EKSA++LDKEL+ YH A+AMQT
Sbjct: 176 NRGRGGGRGRGRGGRVRKNGVEKSAEELDKELEKYHATADAMQT 219
Score = 77.4 bits (189), Expect(2) = 4e-52
Identities = 39/55 (70%), Positives = 48/55 (87%), Gaps = 3/55 (5%)
Frame = +1
Query: 1099 CLHQSFRKTKNLPWQNG--LFEESLKAAGLSA-LEAGTKLYISNLDVGVSNEDIR 1254
C QS R+TKNLPWQNG LFE+SL+AAG+S+ LE+GTK+Y+SNLDVGV+N DIR
Sbjct: 3 CSLQSSRRTKNLPWQNGNGLFEDSLRAAGISSGLESGTKVYVSNLDVGVTNSDIR 57
>emb|CAJ44458.1| ALY protein [Nicotiana benthamiana]
Length = 275
Score = 156 bits (394), Expect(2) = 5e-52
Identities = 93/164 (56%), Positives = 111/164 (67%), Gaps = 3/164 (1%)
Frame = +2
Query: 1328 ELFSEIGELIRYAIHFDKNGRPSGSAEVVFARRSDAFQALKRYNNVQLDGKPMKIEIIGA 1507
ELFSEIGELIRYAIH+DKNGRPSG+AEVVFARRSDA+QALKRYNNVQLDGKPMKIE++
Sbjct: 115 ELFSEIGELIRYAIHYDKNGRPSGAAEVVFARRSDAYQALKRYNNVQLDGKPMKIEVVAP 174
Query: 1508 NAEIPLSARVNVVGAANGRKRTVVMASRPIRTRGGGFASSNRGSVQXXXXXXXXXXXXXX 1687
++PLSARV+ VG NGR RTVVM R RG +++NRGS Q
Sbjct: 175 PTDMPLSARVD-VGRGNGR-RTVVMMPGSARGRGSA-SAANRGSSQRGRGGFGTTSGRGR 231
Query: 1688 XXXXXXXXXXXXXAQWKKK-TEKSADDLDKELDSYH--AEAMQT 1810
+ +K EKSA++LDKEL++Y A+AMQT
Sbjct: 232 SRGRGGGRGRGRGGRGRKNGVEKSAEELDKELENYRATADAMQT 275
Score = 77.0 bits (188), Expect(2) = 5e-52
Identities = 38/52 (73%), Positives = 47/52 (90%), Gaps = 3/52 (5%)
Frame = +1
Query: 1108 QSFRKTKNLPWQNG--LFEESLKAAGL-SALEAGTKLYISNLDVGVSNEDIR 1254
+SFR+TKNLPWQNG LFE+SL+AAG+ S LE+GTK+Y+SNLDVGV+N DIR
Sbjct: 63 KSFRRTKNLPWQNGNGLFEDSLRAAGIPSGLESGTKVYVSNLDVGVTNSDIR 114
>ref|XP_002531919.1| RNA and export factor binding protein, putative [Ricinus communis]
gi|223528429|gb|EEF30463.1| RNA and export factor binding
protein, putative [Ricinus communis]
Length = 268
Score = 163 bits (413), Expect(2) = 7e-52
Identities = 91/161 (56%), Positives = 106/161 (65%)
Frame = +2
Query: 1328 ELFSEIGELIRYAIHFDKNGRPSGSAEVVFARRSDAFQALKRYNNVQLDGKPMKIEIIGA 1507
ELF+EIG+L RYA+H+DKNGR +GSAEVV+ RRS+AF ALK+YNNV LDGKPMKIEI+G
Sbjct: 113 ELFAEIGDLKRYAVHYDKNGRSTGSAEVVYTRRSEAFAALKKYNNVLLDGKPMKIEIVGV 172
Query: 1508 NAEIPLSARVNVVGAANGRKRTVVMASRPIRTRGGGFASSNRGSVQXXXXXXXXXXXXXX 1687
E P+SARVNV G RKRTVVM P RG GFA SNRG+ Q
Sbjct: 173 TGEAPISARVNVTGINGRRKRTVVMTPGP--GRGRGFAPSNRGAGQRSRGGLRNLGRGRG 230
Query: 1688 XXXXXXXXXXXXXAQWKKKTEKSADDLDKELDSYHAEAMQT 1810
K+ EKSAD+LDKELD+YHAEAMQ+
Sbjct: 231 RGRGRGGHGGRGK---KQPLEKSADELDKELDTYHAEAMQS 268
Score = 69.3 bits (168), Expect(2) = 7e-52
Identities = 29/46 (63%), Positives = 40/46 (86%)
Frame = +1
Query: 1117 RKTKNLPWQNGLFEESLKAAGLSALEAGTKLYISNLDVGVSNEDIR 1254
R+ +NLPWQ+ L E+S++AAG++ +E GTKLY+SNL+ GVSNEDIR
Sbjct: 67 RRIRNLPWQHDLLEDSIRAAGITGVEVGTKLYVSNLEYGVSNEDIR 112
>ref|XP_002276497.1| PREDICTED: THO complex subunit 4 [Vitis vinifera]
gi|296087136|emb|CBI33510.3| unnamed protein product
[Vitis vinifera]
Length = 269
Score = 154 bits (388), Expect(2) = 5e-50
Identities = 89/174 (51%), Positives = 110/174 (63%), Gaps = 13/174 (7%)
Frame = +2
Query: 1328 ELFSEIGELIRYAIHFDKNGRPSGSAEVVFARRSDAFQALKRYNNVQLDGKPMKIEIIGA 1507
ELFSEIG++ RYA+H++KNGRPSGSAEVV+ RRSDAF A+KRYNNV LDGKPMKIEIIG+
Sbjct: 114 ELFSEIGDIKRYAVHYEKNGRPSGSAEVVYTRRSDAFAAVKRYNNVLLDGKPMKIEIIGS 173
Query: 1508 NAEIPLSARVNVVGAANG-RKRTVVMA------------SRPIRTRGGGFASSNRGSVQX 1648
++++P+SARVNV+G NG R+RTVVM +R RG G S+ RG +
Sbjct: 174 DSDMPVSARVNVIGGVNGKRRRTVVMTPGVGHARGSTAINRSSSRRGRGGLSNGRGRGRA 233
Query: 1649 XXXXXXXXXXXXXXXXXXXXXXXXXXAQWKKKTEKSADDLDKELDSYHAEAMQT 1810
K+ EKSA +LDKELD+YHAEAM T
Sbjct: 234 GSRGRGRGRGR------------------KQPVEKSAVELDKELDNYHAEAMHT 269
Score = 72.8 bits (177), Expect(2) = 5e-50
Identities = 36/49 (73%), Positives = 43/49 (87%)
Frame = +1
Query: 1108 QSFRKTKNLPWQNGLFEESLKAAGLSALEAGTKLYISNLDVGVSNEDIR 1254
+S R+TK +PWQ+ LFE+SL+AAGL LEAGTKLYISNLD GV+NEDIR
Sbjct: 66 KSSRRTK-IPWQHDLFEDSLRAAGLPGLEAGTKLYISNLDYGVTNEDIR 113
>ref|XP_003600720.1| THO complex subunit [Medicago truncatula] gi|355489768|gb|AES70971.1|
THO complex subunit [Medicago truncatula]
Length = 218
Score = 157 bits (396), Expect(2) = 5e-50
Identities = 93/167 (55%), Positives = 109/167 (65%), Gaps = 6/167 (3%)
Frame = +2
Query: 1328 ELFSEIGELIRYAIHFDKNGRPSGSAEVVFARRSDAFQALKRYNNVQLDGKPMKIEIIGA 1507
ELFSE+GEL RYA+H+DKNG P+GSAEVV+ RRSDAF ALKRYNNV LDGKPMKIEI+G
Sbjct: 54 ELFSELGELKRYAVHYDKNGHPTGSAEVVYNRRSDAFAALKRYNNVLLDGKPMKIEIVGT 113
Query: 1508 NAEIPLSARVNV----VGAANG-RKRTVVMASRPIRTRGGGFASSNRGSVQXXXXXXXXX 1672
N+ +P++ARVNV V A NG RKRTVVM P RGGG A NRG+
Sbjct: 114 NSALPVTARVNVSSMNVSAMNGQRKRTVVMT--PRGGRGGGPAMLNRGAGWGRRGGSRGG 171
Query: 1673 XXXXXXXXXXXXXXXXXXAQWKKK-TEKSADDLDKELDSYHAEAMQT 1810
+ +K EKSA+ LDKEL++YHAEAMQT
Sbjct: 172 SGSMRGRGRGRPGRGGGRGRGRKDGVEKSAEQLDKELETYHAEAMQT 218
Score = 69.7 bits (169), Expect(2) = 5e-50
Identities = 32/50 (64%), Positives = 40/50 (80%)
Frame = +1
Query: 1105 HQSFRKTKNLPWQNGLFEESLKAAGLSALEAGTKLYISNLDVGVSNEDIR 1254
H S R+ K L WQ+ LFE+SL+AAG+ +EA TKLY+SNLD GV+NEDIR
Sbjct: 4 HFSIRRPKTLAWQSDLFEDSLRAAGIQGVEADTKLYVSNLDRGVTNEDIR 53