BLASTX nr result

ID: Scutellaria23_contig00003711 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00003711
         (216 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276824.2| PREDICTED: FACT complex subunit SPT16-like [...   144   7e-33
emb|CAN64799.1| hypothetical protein VITISV_017318 [Vitis vinifera]   144   7e-33
ref|XP_002512565.1| FACT complex subunit SPT16, putative [Ricinu...   142   4e-32
ref|XP_002319467.1| global transcription factor group [Populus t...   140   1e-31
emb|CBI39650.3| unnamed protein product [Vitis vinifera]              139   2e-31

>ref|XP_002276824.2| PREDICTED: FACT complex subunit SPT16-like [Vitis vinifera]
          Length = 1071

 Score =  144 bits (363), Expect = 7e-33
 Identities = 67/71 (94%), Positives = 70/71 (98%)
 Frame = -3

Query: 214  QRERDRKNKISMEFQNFVNRVNDLWGQPQFKSLDLEFDQPLRELGFHGVPHKSSAFIVPT 35
            QRERDRKNKI+M+FQNFVNRVNDLWGQPQFK LDLEFDQPLRELGFHGVPHK+SAFIVPT
Sbjct: 790  QRERDRKNKINMDFQNFVNRVNDLWGQPQFKGLDLEFDQPLRELGFHGVPHKASAFIVPT 849

Query: 34   SSCLVELIETP 2
            SSCLVELIETP
Sbjct: 850  SSCLVELIETP 860


>emb|CAN64799.1| hypothetical protein VITISV_017318 [Vitis vinifera]
          Length = 1019

 Score =  144 bits (363), Expect = 7e-33
 Identities = 67/71 (94%), Positives = 70/71 (98%)
 Frame = -3

Query: 214 QRERDRKNKISMEFQNFVNRVNDLWGQPQFKSLDLEFDQPLRELGFHGVPHKSSAFIVPT 35
           QRERDRKNKI+M+FQNFVNRVNDLWGQPQFK LDLEFDQPLRELGFHGVPHK+SAFIVPT
Sbjct: 738 QRERDRKNKINMDFQNFVNRVNDLWGQPQFKGLDLEFDQPLRELGFHGVPHKASAFIVPT 797

Query: 34  SSCLVELIETP 2
           SSCLVELIETP
Sbjct: 798 SSCLVELIETP 808


>ref|XP_002512565.1| FACT complex subunit SPT16, putative [Ricinus communis]
           gi|223548526|gb|EEF50017.1| FACT complex subunit SPT16,
           putative [Ricinus communis]
          Length = 1098

 Score =  142 bits (357), Expect = 4e-32
 Identities = 65/71 (91%), Positives = 70/71 (98%)
 Frame = -3

Query: 214 QRERDRKNKISMEFQNFVNRVNDLWGQPQFKSLDLEFDQPLRELGFHGVPHKSSAFIVPT 35
           QRERDRKNKI+M+FQNFVNRVND+WGQPQF+ LDLEFDQPLRELGFHGVPHK+SAFIVPT
Sbjct: 787 QRERDRKNKINMDFQNFVNRVNDVWGQPQFRGLDLEFDQPLRELGFHGVPHKASAFIVPT 846

Query: 34  SSCLVELIETP 2
           SSCLVELIETP
Sbjct: 847 SSCLVELIETP 857


>ref|XP_002319467.1| global transcription factor group [Populus trichocarpa]
            gi|222857843|gb|EEE95390.1| global transcription factor
            group [Populus trichocarpa]
          Length = 1053

 Score =  140 bits (352), Expect = 1e-31
 Identities = 65/71 (91%), Positives = 69/71 (97%)
 Frame = -3

Query: 214  QRERDRKNKISMEFQNFVNRVNDLWGQPQFKSLDLEFDQPLRELGFHGVPHKSSAFIVPT 35
            QRERDRKNKI+M+FQNFVNRVND+W QPQFK+LDLEFDQPLRELGFHGVPHK SAFIVPT
Sbjct: 790  QRERDRKNKINMDFQNFVNRVNDVWSQPQFKALDLEFDQPLRELGFHGVPHKVSAFIVPT 849

Query: 34   SSCLVELIETP 2
            SSCLVELIETP
Sbjct: 850  SSCLVELIETP 860


>emb|CBI39650.3| unnamed protein product [Vitis vinifera]
          Length = 721

 Score =  139 bits (350), Expect = 2e-31
 Identities = 64/69 (92%), Positives = 68/69 (98%)
 Frame = -3

Query: 208 ERDRKNKISMEFQNFVNRVNDLWGQPQFKSLDLEFDQPLRELGFHGVPHKSSAFIVPTSS 29
           +RDRKNKI+M+FQNFVNRVNDLWGQPQFK LDLEFDQPLRELGFHGVPHK+SAFIVPTSS
Sbjct: 482 DRDRKNKINMDFQNFVNRVNDLWGQPQFKGLDLEFDQPLRELGFHGVPHKASAFIVPTSS 541

Query: 28  CLVELIETP 2
           CLVELIETP
Sbjct: 542 CLVELIETP 550


Top