BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00003576
         (372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002887822.1| pentatricopeptide repeat-containing protein ...   166   1e-39
ref|XP_004158824.1| PREDICTED: pentatricopeptide repeat-containi...   164   9e-39
ref|NP_178170.1| pentatricopeptide repeat-containing protein [Ar...   163   1e-38
ref|XP_002306508.1| predicted protein [Populus trichocarpa] gi|2...   162   3e-38
ref|XP_002274114.2| PREDICTED: pentatricopeptide repeat-containi...   161   5e-38

>ref|XP_002887822.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297333663|gb|EFH64081.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 407

 Score =  166 bits (421), Expect = 1e-39
 Identities = 76/116 (65%), Positives = 92/116 (79%)
 Frame = +3

Query: 24  DCSDYRPDSVLETLNCYANDWKLALEFFNWVESQCGFQHTTQTVNRMVDILGKFFEFDVA 203
           D S Y   +V E L+CY NDW+ ALEFFNWVE + GF+HTT+T NRM+DILGK+FEF+  
Sbjct: 1   DQSSYDQKTVCEALSCYINDWQKALEFFNWVEKESGFRHTTETFNRMIDILGKYFEFETC 60

Query: 204 WNLIERMRENPCSLPDHTTFRVLFKRYVSAHLVNEAIDAFVKLDKYNLRDETSFCN 371
           W LI RM  NP SLP+H TFR++FKRYV+AHLV EAIDA+ KLD +NLRD+TSF N
Sbjct: 61  WALINRMIGNPESLPNHVTFRIVFKRYVTAHLVQEAIDAYDKLDDFNLRDDTSFYN 116


>ref|XP_004158824.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80550,
           mitochondrial-like [Cucumis sativus]
          Length = 450

 Score =  164 bits (414), Expect = 9e-39
 Identities = 76/122 (62%), Positives = 94/122 (77%)
 Frame = +3

Query: 6   PPSTHFDCSDYRPDSVLETLNCYANDWKLALEFFNWVESQCGFQHTTQTVNRMVDILGKF 185
           P  T+FD     P +V E L+ Y NDWK + EFFNWVES+C F HTT+T NRM+DILGKF
Sbjct: 40  PTHTNFD-----PFTVREALDSYCNDWKRSYEFFNWVESECKFDHTTETYNRMLDILGKF 94

Query: 186 FEFDVAWNLIERMRENPCSLPDHTTFRVLFKRYVSAHLVNEAIDAFVKLDKYNLRDETSF 365
           FEFD++W LI RMR++P + PDH TFR+LFKRY  AHLV+EAI A+ +L ++ LRDETSF
Sbjct: 95  FEFDLSWVLINRMRQSPSASPDHATFRILFKRYALAHLVSEAIAAYERLREFKLRDETSF 154

Query: 366 CN 371
           CN
Sbjct: 155 CN 156


>ref|NP_178170.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75264854|sp|Q9M8M3.1|PP136_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g80550, mitochondrial; Flags: Precursor
           gi|6730729|gb|AAF27119.1|AC018849_7 unknown protein;
           31926-33272 [Arabidopsis thaliana]
           gi|332198297|gb|AEE36418.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 448

 Score =  163 bits (413), Expect = 1e-38
 Identities = 74/116 (63%), Positives = 93/116 (80%)
 Frame = +3

Query: 24  DCSDYRPDSVLETLNCYANDWKLALEFFNWVESQCGFQHTTQTVNRMVDILGKFFEFDVA 203
           D S Y   +V E L CY+NDW+ ALEFFNWVE + GF+HTT+T NR++DILGK+FEF+++
Sbjct: 41  DQSSYDQKTVCEALTCYSNDWQKALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEIS 100

Query: 204 WNLIERMRENPCSLPDHTTFRVLFKRYVSAHLVNEAIDAFVKLDKYNLRDETSFCN 371
           W LI RM  N  S+P+H TFR++FKRYV+AHLV EAIDA+ KLD +NLRDETSF N
Sbjct: 101 WALINRMIGNTESVPNHVTFRIVFKRYVTAHLVQEAIDAYDKLDDFNLRDETSFYN 156


>ref|XP_002306508.1| predicted protein [Populus trichocarpa] gi|222855957|gb|EEE93504.1|
           predicted protein [Populus trichocarpa]
          Length = 439

 Score =  162 bits (409), Expect = 3e-38
 Identities = 71/108 (65%), Positives = 92/108 (85%), Gaps = 1/108 (0%)
 Frame = +3

Query: 48  SVLETLNCYANDWKLALEFFNWVESQCGFQHTTQTVNRMVDILGKFFEFDVAWNLIERMR 227
           +V +TL+CY NDWK AL+FFNWVE++  FQHTT+T NRM+DILGKFFEFD++W+LI+RMR
Sbjct: 48  TVFQTLSCYNNDWKRALDFFNWVETESQFQHTTETYNRMIDILGKFFEFDLSWDLIQRMR 107

Query: 228 ENPCSLPDHTTFRVLFKRYVSAHLVNEAIDAFV-KLDKYNLRDETSFC 368
            NP S P+HTTFRVLF RY+SAHLVNEA+  +  +L ++ L+DETS+C
Sbjct: 108 NNPFSTPNHTTFRVLFHRYISAHLVNEAVSVYEDRLKEFGLKDETSYC 155


>ref|XP_002274114.2| PREDICTED: pentatricopeptide repeat-containing protein At1g80550,
           mitochondrial-like [Vitis vinifera]
          Length = 571

 Score =  161 bits (408), Expect = 5e-38
 Identities = 73/122 (59%), Positives = 95/122 (77%)
 Frame = +3

Query: 6   PPSTHFDCSDYRPDSVLETLNCYANDWKLALEFFNWVESQCGFQHTTQTVNRMVDILGKF 185
           P ST FD S  R     +TL+CYANDWK ALEFF+WV++QCGF HTT T N M+DILGKF
Sbjct: 171 PNSTSFDHSTVR-----QTLSCYANDWKRALEFFDWVQTQCGFNHTTDTYNGMIDILGKF 225

Query: 186 FEFDVAWNLIERMRENPCSLPDHTTFRVLFKRYVSAHLVNEAIDAFVKLDKYNLRDETSF 365
           FEFD+ W LI+RM+ +P + P+H TFR +FKRY +AHLV EA++A+ + +++NLRDETS+
Sbjct: 226 FEFDLIWVLIQRMKADPVAYPNHVTFRFVFKRYAAAHLVEEAMNAYYRTEEFNLRDETSY 285

Query: 366 CN 371
            N
Sbjct: 286 SN 287