BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00003409
         (3751 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265454.1| PREDICTED: DNA-directed RNA polymerase III s...  1586   0.0  
ref|XP_002321356.1| predicted protein [Populus trichocarpa] gi|2...  1528   0.0  
ref|XP_002525541.1| DNA-directed RNA polymerase III subunit, put...  1513   0.0  
ref|XP_004141655.1| PREDICTED: DNA-directed RNA polymerase III s...  1509   0.0  
ref|XP_002863522.1| hypothetical protein ARALYDRAFT_917015 [Arab...  1501   0.0  

>ref|XP_002265454.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Vitis
            vinifera]
          Length = 1142

 Score = 1586 bits (4106), Expect = 0.0
 Identities = 780/971 (80%), Positives = 869/971 (89%), Gaps = 4/971 (0%)
 Frame = -2

Query: 3735 RLEMDKQNFAAPVKKAVDKYQLLPEFLKVRGLVKQHLDSFNYFVRTQIKKIVQANDLITS 3556
            R+ + K   A PVK+AVDK+ LLPEFLKVRGLVKQHLDSFNYFV+T IKKIV+AND I S
Sbjct: 3    RMSIHKHFPADPVKQAVDKFPLLPEFLKVRGLVKQHLDSFNYFVKTDIKKIVRANDRIVS 62

Query: 3555 SVDPNIYLRYKDVWIGEPSVMTDAVTEKLTPHNCRLSDMTYAAPIYVNIEYITGSNNSKQ 3376
            SVDP+IYLR+KDV IGEPS+  D ++EKL PH CRLSDMTYAAPI VNIEYITGS+  K 
Sbjct: 63   SVDPSIYLRFKDVRIGEPSITVDGISEKLNPHTCRLSDMTYAAPILVNIEYITGSHVQKT 122

Query: 3375 TQMKRNVVIGRMPIMLRSCRCILHGKDEDELARYGECPLDPGGYFVIKGTEKVILIQEQL 3196
               K +VVIGRMPIMLRSC C+L+ KDE ELAR GECPLDPGGYFV+KGTEKVILIQEQL
Sbjct: 123  RVEKNDVVIGRMPIMLRSCCCVLYKKDEAELARLGECPLDPGGYFVVKGTEKVILIQEQL 182

Query: 3195 SKNRIIIDTDKKGCVQASVASSTETIKSKTVLKMEKEKIYLYLNQFTSKVPIMVVLKAMG 3016
            SKNRIIIDTDKKG + ASV SSTE+ KSKTV+ MEKEKI+L LNQFTSK+PIM+V+KAMG
Sbjct: 183  SKNRIIIDTDKKGNINASVTSSTESTKSKTVIVMEKEKIWLQLNQFTSKIPIMIVMKAMG 242

Query: 3015 MESDQEVVQMIGRDPRYGELLTPSIEDCVKEAVHTQHQALEFIEQKVKRLP-YSTTPQKE 2839
            MESDQEVVQM+GR+PRY  LL PS+E+C    ++TQ QALEF+E+KVK+LP Y+ + +KE
Sbjct: 243  MESDQEVVQMVGRNPRYSALLLPSMEECASHGIYTQQQALEFLERKVKKLPFYNPSLEKE 302

Query: 2838 GRALSILRDIFIANVPVRENNFRPKCIYAAVMLRRMMEAILNKDTMDDKDYVGNKRLELS 2659
            GR ++ILRD FIANVPVR+NNFRPKC+Y AVMLRRMM+AILNKD MDDKDYVGNKRLELS
Sbjct: 303  GRGMAILRDTFIANVPVRQNNFRPKCLYVAVMLRRMMDAILNKDAMDDKDYVGNKRLELS 362

Query: 2658 GQMLSLLFEDLFKTMNDEARKTMDTALSKLHRSSRFDISQ---YIVKDRITVGLERALST 2488
            GQ++SLLFEDLFKTM  E +KT+D  L+K  RSSRFD SQ   +IV+D ITVGLER LST
Sbjct: 363  GQLISLLFEDLFKTMISEVKKTIDAILAKPSRSSRFDFSQCLRFIVRDSITVGLERTLST 422

Query: 2487 GNWDVKRFRMHRKGMTQVVARLSYIATLGNMTKISPQFEKSRKVSGPRALQPSQWGMLCP 2308
            GNWDVKRFRMHRKGM+QVVARLSYI +LG+MTKISPQFEKSRKVSGPRALQPSQWGMLCP
Sbjct: 423  GNWDVKRFRMHRKGMSQVVARLSYIGSLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCP 482

Query: 2307 CDTPEGESCGLVKNLALMTHVTTDEVEGPLISMCYTLGVQSLESLSGEDLHMPNSYLIIF 2128
            CDTPEGE+CGLVKNLALMTHVTTDE E PLIS+CY+LGV+ LE LSGE+LH PNS+LIIF
Sbjct: 483  CDTPEGEACGLVKNLALMTHVTTDEEESPLISLCYSLGVEDLELLSGEELHTPNSFLIIF 542

Query: 2127 NGLILGKHRQPQKFASLMRKLRRTGKIGEFVSIFVNEKQCCVYIASDGGRVCRPLVIADK 1948
            NGLILGKHR+PQ+FA+ +RKLRR GKIGEFVS+FVNEKQ CVYIASDGGRVCRP+VIADK
Sbjct: 543  NGLILGKHRRPQRFANALRKLRRAGKIGEFVSVFVNEKQHCVYIASDGGRVCRPVVIADK 602

Query: 1947 GVSRIKEHHMKELKDGYRTFHSFLKEGLIEYLDVNEENNALIALYEENANAETTHIEIEP 1768
            G SRIKEHHMKEL DG RTF  FL++GLIEYLDVNEENNALIALYE +A  ETTHIEIEP
Sbjct: 603  GKSRIKEHHMKELIDGVRTFDDFLRDGLIEYLDVNEENNALIALYEADAKPETTHIEIEP 662

Query: 1767 FTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLIYLLVYPQRPLLT 1588
            FTILGVCAGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMD+L+YLLVYPQRPLLT
Sbjct: 663  FTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDSLLYLLVYPQRPLLT 722

Query: 1587 TRTINLVNYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVIKKMSAVSQK 1408
            TRTI LV YDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV+KK SAV+Q+
Sbjct: 723  TRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKFSAVNQR 782

Query: 1407 YETGVSDRIVRPQREGYEADKMQILDDDGIAAPGQIIRPNDIYINKQSPKDIRSTVGNSK 1228
            YE   SDRIVRP + G++A++MQILDDDG+AAPG+II+PNDIYINK+SP   +  + +  
Sbjct: 783  YENNASDRIVRPLKVGHDAERMQILDDDGLAAPGEIIKPNDIYINKESPIITKGPLISPV 842

Query: 1227 SLSDSQYKPSKQTYKGPEGETPVVDRVSLCSDRNSNLCIKFMIRHTRRPEVGDKFSSRHG 1048
             L DS YKPS+QT+KGPEGE  VVDRV+LCSD+NSNLCIKF+IRHTRRPEVGDKFSSRHG
Sbjct: 843  GLPDSAYKPSRQTFKGPEGEASVVDRVALCSDKNSNLCIKFLIRHTRRPEVGDKFSSRHG 902

Query: 1047 QKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSDGRFHYGS 868
            QKGVCGTI+QQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG KAGVS GRFHYGS
Sbjct: 903  QKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGS 962

Query: 867  AFGEPSGHADK 835
            AFGEPSGHADK
Sbjct: 963  AFGEPSGHADK 973



 Score =  296 bits (757), Expect = 4e-77
 Identities = 140/152 (92%), Positives = 148/152 (97%)
 Frame = -3

Query: 749  GKDFIYSGITGEPLQAYIFMGPIYYQKLKHMVLDKMHARGSGPRVMITRQPTEGKSRNGG 570
            GKDFIYSGITG PLQAYIFMGPIYYQKLKHMVLDKMHARGSGPRVM+TRQPTEG++RNGG
Sbjct: 990  GKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGG 1049

Query: 569  LRVGEMERDCLIAYGASMLIYERLMISSDPFEVQVCRKCGLLGYYNFKLKTGICSTCKNG 390
            LRVGEMERDCLIAYGASMLI+ERLM+SSDPFEVQVCR CGLLGYYN KLK GICSTCKNG
Sbjct: 1050 LRVGEMERDCLIAYGASMLIFERLMVSSDPFEVQVCRVCGLLGYYNHKLKIGICSTCKNG 1109

Query: 389  ENISTMKLPYACKLLFQELQAMNIIPRLKLTE 294
            +NISTMKLPYACKLLFQELQAMN++PRLKLTE
Sbjct: 1110 DNISTMKLPYACKLLFQELQAMNVVPRLKLTE 1141


>ref|XP_002321356.1| predicted protein [Populus trichocarpa] gi|222868352|gb|EEF05483.1|
            predicted protein [Populus trichocarpa]
          Length = 1141

 Score = 1528 bits (3956), Expect = 0.0
 Identities = 755/966 (78%), Positives = 851/966 (88%), Gaps = 2/966 (0%)
 Frame = -2

Query: 3726 MDKQNFAA-PVKKAVDKYQLLPEFLKVRGLVKQHLDSFNYFVRTQIKKIVQANDLITSSV 3550
            +DKQ  AA PVK AVDK+QLLPEFLK RGLVKQHLDSFNYF+   IKKIV+AND I S+V
Sbjct: 4    IDKQKHAAAPVKSAVDKFQLLPEFLKGRGLVKQHLDSFNYFINIGIKKIVRANDRIVSTV 63

Query: 3549 DPNIYLRYKDVWIGEPSVMTDAVTEKLTPHNCRLSDMTYAAPIYVNIEYITGSNNSKQTQ 3370
            DP++YLR+ DV IG+PS++ DA++E++TPH CRLSD TYAAPI VNIEYI+GS+  K+  
Sbjct: 64   DPSLYLRFTDVKIGKPSMVVDAISEQITPHMCRLSDTTYAAPILVNIEYISGSHGRKEKM 123

Query: 3369 MKRNVVIGRMPIMLRSCRCILHGKDEDELARYGECPLDPGGYFVIKGTEKVILIQEQLSK 3190
            +K +VVIGRMPIMLRSC C+L+GK+E ELAR GECPLDPGGYFV+KGTEKVILIQEQLSK
Sbjct: 124  IKNDVVIGRMPIMLRSCCCVLYGKNEAELARLGECPLDPGGYFVVKGTEKVILIQEQLSK 183

Query: 3189 NRIIIDTDKKGCVQASVASSTETIKSKTVLKMEKEKIYLYLNQFTSKVPIMVVLKAMGME 3010
            NRIIID DKKG + ASV SSTE  KSKTV+ MEKEK+YL LNQF  K+PIMVV+KAMGME
Sbjct: 184  NRIIIDNDKKGNINASVTSSTEATKSKTVILMEKEKMYLCLNQFAKKIPIMVVMKAMGME 243

Query: 3009 SDQEVVQMIGRDPRYGELLTPSIEDCVKEAVHTQHQALEFIEQKVKRLPYSTTP-QKEGR 2833
            SDQEVVQM+GRDPRY  LL PSIE+C    V+TQ QALE++E  VKR  YS++  +KE R
Sbjct: 244  SDQEVVQMVGRDPRYSALLLPSIEECASHGVYTQQQALEYLEAMVKRSTYSSSSTEKENR 303

Query: 2832 ALSILRDIFIANVPVRENNFRPKCIYAAVMLRRMMEAILNKDTMDDKDYVGNKRLELSGQ 2653
            AL+ILRD+FIANVPVR+NNFRPKCIY AVMLRRMMEA+LNKD MDDKDYVGNKRLELSGQ
Sbjct: 304  ALAILRDVFIANVPVRKNNFRPKCIYVAVMLRRMMEALLNKDAMDDKDYVGNKRLELSGQ 363

Query: 2652 MLSLLFEDLFKTMNDEARKTMDTALSKLHRSSRFDISQYIVKDRITVGLERALSTGNWDV 2473
            ++SLLFEDLFKTM  E +KT DT L K +RSSRFD SQYIV+D IT GLERALSTGNWDV
Sbjct: 364  LISLLFEDLFKTMITEVQKTADTLLVKQNRSSRFDFSQYIVRDSITNGLERALSTGNWDV 423

Query: 2472 KRFRMHRKGMTQVVARLSYIATLGNMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDTPE 2293
            KRFRM+RKG+TQV+ RLSY+A+LG+MT+ISPQFEKSRKVSGPRALQPSQWGMLCPCDTPE
Sbjct: 424  KRFRMNRKGVTQVLVRLSYMASLGHMTRISPQFEKSRKVSGPRALQPSQWGMLCPCDTPE 483

Query: 2292 GESCGLVKNLALMTHVTTDEVEGPLISMCYTLGVQSLESLSGEDLHMPNSYLIIFNGLIL 2113
            GE+CGLVKNLALMTHVTTDE E PLIS+C  LGV+ LE LSGE+LH PNS+L+IFNGLIL
Sbjct: 484  GEACGLVKNLALMTHVTTDEEESPLISLCKCLGVEDLELLSGEELHTPNSFLVIFNGLIL 543

Query: 2112 GKHRQPQKFASLMRKLRRTGKIGEFVSIFVNEKQCCVYIASDGGRVCRPLVIADKGVSRI 1933
            GKHR+PQ+FA+ MRKLRR GKIGEFVS+FVNEKQ  VYIASDGGRVCRPLVIADKGVSRI
Sbjct: 544  GKHRRPQQFANAMRKLRRAGKIGEFVSVFVNEKQRAVYIASDGGRVCRPLVIADKGVSRI 603

Query: 1932 KEHHMKELKDGYRTFHSFLKEGLIEYLDVNEENNALIALYEENANAETTHIEIEPFTILG 1753
            KEHHM+EL DG RTF  FL EGLIEYLDVNEENNALIALYE  A  ETTHIEIEPFTILG
Sbjct: 604  KEHHMRELMDGARTFDDFLHEGLIEYLDVNEENNALIALYEWEATPETTHIEIEPFTILG 663

Query: 1752 VCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLIYLLVYPQRPLLTTRTIN 1573
            V AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQ  RMD+L+YLLVYPQRPLLTTRTI 
Sbjct: 664  VVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQASRMDSLLYLLVYPQRPLLTTRTIE 723

Query: 1572 LVNYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVIKKMSAVSQKYETGV 1393
            LV YDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFGRCIV+KK +  +QKYE G 
Sbjct: 724  LVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVLKKYTCTNQKYENGA 783

Query: 1392 SDRIVRPQREGYEADKMQILDDDGIAAPGQIIRPNDIYINKQSPKDIRSTVGNSKSLSDS 1213
            SDRI+RP++     ++ ++LDDDG+AAPG+IIR  DIYINK+SP + R  + ++ +L+D 
Sbjct: 784  SDRILRPRK---NEERERVLDDDGLAAPGEIIRHGDIYINKESPIETRGPLKSAAALADV 840

Query: 1212 QYKPSKQTYKGPEGETPVVDRVSLCSDRNSNLCIKFMIRHTRRPEVGDKFSSRHGQKGVC 1033
            +Y+P  Q +KG EGE+ VVDRV+LCSD+N+NLCIK+ IRHTRRPEVGDKFSSRHGQKGVC
Sbjct: 841  KYRPCAQIFKGTEGESCVVDRVALCSDKNNNLCIKYKIRHTRRPEVGDKFSSRHGQKGVC 900

Query: 1032 GTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSDGRFHYGSAFGEP 853
            GTI+QQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG KAGVS GRFHYGSAFGEP
Sbjct: 901  GTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGEP 960

Query: 852  SGHADK 835
            SGHAD+
Sbjct: 961  SGHADR 966



 Score =  275 bits (704), Expect = 5e-71
 Identities = 127/152 (83%), Positives = 141/152 (92%)
 Frame = -3

Query: 749  GKDFIYSGITGEPLQAYIFMGPIYYQKLKHMVLDKMHARGSGPRVMITRQPTEGKSRNGG 570
            GKDFIYSGITG PLQAYIFMGPIYYQKLKHMVLDKMHARGSGPRVM+TRQPT+G++RNGG
Sbjct: 989  GKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTDGRARNGG 1048

Query: 569  LRVGEMERDCLIAYGASMLIYERLMISSDPFEVQVCRKCGLLGYYNFKLKTGICSTCKNG 390
            LRVGEME+DCL+AYG SML+YERLM+SSD FE QVCR CGLLGYYN KLK  +C+TCKNG
Sbjct: 1049 LRVGEMEKDCLVAYGTSMLLYERLMVSSDQFEAQVCRACGLLGYYNQKLKAAMCTTCKNG 1108

Query: 389  ENISTMKLPYACKLLFQELQAMNIIPRLKLTE 294
            + +STMKLPYACKLL QELQ+MNI+PRLKL E
Sbjct: 1109 DKVSTMKLPYACKLLIQELQSMNIVPRLKLAE 1140


>ref|XP_002525541.1| DNA-directed RNA polymerase III subunit, putative [Ricinus communis]
            gi|223535120|gb|EEF36800.1| DNA-directed RNA polymerase
            III subunit, putative [Ricinus communis]
          Length = 1139

 Score = 1513 bits (3916), Expect = 0.0
 Identities = 743/963 (77%), Positives = 841/963 (87%)
 Frame = -2

Query: 3726 MDKQNFAAPVKKAVDKYQLLPEFLKVRGLVKQHLDSFNYFVRTQIKKIVQANDLITSSVD 3547
            +DKQ   AP+K AVDK+QLLPEFLKVRGLVKQHLDSFNYFV   IKKIV+AND I S+VD
Sbjct: 22   IDKQKLTAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNIGIKKIVRANDRIVSTVD 81

Query: 3546 PNIYLRYKDVWIGEPSVMTDAVTEKLTPHNCRLSDMTYAAPIYVNIEYITGSNNSKQTQM 3367
            P IYLR+KDV IG PS + D V+E+L+PH CRLSD TYAAPI VN+EYI GS++ K    
Sbjct: 82   PGIYLRFKDVRIGTPSDIMDGVSEQLSPHMCRLSDKTYAAPILVNVEYIYGSHDQKTRVE 141

Query: 3366 KRNVVIGRMPIMLRSCRCILHGKDEDELARYGECPLDPGGYFVIKGTEKVILIQEQLSKN 3187
            K +VVIGRMPIMLRS  C+L+GKDE ELAR GECPLDPGGYFVIKGTEKVILIQEQLSKN
Sbjct: 142  KNDVVIGRMPIMLRSRSCVLYGKDEAELARLGECPLDPGGYFVIKGTEKVILIQEQLSKN 201

Query: 3186 RIIIDTDKKGCVQASVASSTETIKSKTVLKMEKEKIYLYLNQFTSKVPIMVVLKAMGMES 3007
            RIIIDTDKKG + ASV SSTE  KSKT+++MEKEK+YL LNQF  K+PIMVV+KAMGMES
Sbjct: 202  RIIIDTDKKGNINASVTSSTEATKSKTIIQMEKEKMYLCLNQFVKKIPIMVVIKAMGMES 261

Query: 3006 DQEVVQMIGRDPRYGELLTPSIEDCVKEAVHTQHQALEFIEQKVKRLPYSTTPQKEGRAL 2827
            DQEVVQM+GRDPRY  LL PSIE+C   +++TQ +ALE+++ K            E RAL
Sbjct: 262  DQEVVQMVGRDPRYSALLLPSIEECAGLSIYTQQKALEYLDGK------------ENRAL 309

Query: 2826 SILRDIFIANVPVRENNFRPKCIYAAVMLRRMMEAILNKDTMDDKDYVGNKRLELSGQML 2647
            +ILRD+F+ANVPV +NNFRPKC+Y AVMLRRMMEA+LNKD MDDKDYVGNKRLELSGQ++
Sbjct: 310  TILRDVFLANVPVHKNNFRPKCLYVAVMLRRMMEAMLNKDAMDDKDYVGNKRLELSGQLI 369

Query: 2646 SLLFEDLFKTMNDEARKTMDTALSKLHRSSRFDISQYIVKDRITVGLERALSTGNWDVKR 2467
            SLLFEDLFKTM  E ++T+DT L+K +RSSRFD++QYIV+D IT GLER LSTGN+DVKR
Sbjct: 370  SLLFEDLFKTMITEVQRTIDTVLTKQNRSSRFDLAQYIVRDNITNGLERTLSTGNFDVKR 429

Query: 2466 FRMHRKGMTQVVARLSYIATLGNMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 2287
            F+MHRKGMTQV+ RLSYIA+LG MT++SPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE
Sbjct: 430  FKMHRKGMTQVLVRLSYIASLGMMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 489

Query: 2286 SCGLVKNLALMTHVTTDEVEGPLISMCYTLGVQSLESLSGEDLHMPNSYLIIFNGLILGK 2107
            +CGLVKNLALMTHVTTD+ EGPLIS+CY LGV+ LE LSGE+LH PNS+L+IFNGLILGK
Sbjct: 490  ACGLVKNLALMTHVTTDDEEGPLISLCYCLGVEDLELLSGEELHTPNSFLVIFNGLILGK 549

Query: 2106 HRQPQKFASLMRKLRRTGKIGEFVSIFVNEKQCCVYIASDGGRVCRPLVIADKGVSRIKE 1927
            HR+PQ F + MRKLRR GKIGEFVS+FVNEKQ  VY+ASDGGRVCRPLVIAD+GVSRIKE
Sbjct: 550  HRRPQYFVNSMRKLRRAGKIGEFVSVFVNEKQRAVYLASDGGRVCRPLVIADRGVSRIKE 609

Query: 1926 HHMKELKDGYRTFHSFLKEGLIEYLDVNEENNALIALYEENANAETTHIEIEPFTILGVC 1747
            HHMKEL+DG RTF  FL++GLIEYLDVNEENNAL+ALYE  A  ETTHIEIEPFTILGVC
Sbjct: 610  HHMKELRDGVRTFDDFLRDGLIEYLDVNEENNALVALYEGEATPETTHIEIEPFTILGVC 669

Query: 1746 AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLIYLLVYPQRPLLTTRTINLV 1567
            AGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL RMD+L+YLLVYPQRPLLTTRTI LV
Sbjct: 670  AGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLFRMDSLLYLLVYPQRPLLTTRTIELV 729

Query: 1566 NYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVIKKMSAVSQKYETGVSD 1387
             YDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFGRCIV+KK  A+ QKYE G SD
Sbjct: 730  GYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKYPAIRQKYENGASD 789

Query: 1386 RIVRPQREGYEADKMQILDDDGIAAPGQIIRPNDIYINKQSPKDIRSTVGNSKSLSDSQY 1207
            RI+RP R     ++ ++LD DG+AAPG+II+P+DIY+ K+ P D    V +S +L + +Y
Sbjct: 790  RILRPDR---TVERERVLDYDGLAAPGEIIKPSDIYVKKECPIDTMGPVKSSAALENIKY 846

Query: 1206 KPSKQTYKGPEGETPVVDRVSLCSDRNSNLCIKFMIRHTRRPEVGDKFSSRHGQKGVCGT 1027
            +PS  +YKGPEGE+PV+DRV+L SDRN+NLCIK MIRHTRRPEVGDKFSSRHGQKGVCGT
Sbjct: 847  RPSPLSYKGPEGESPVIDRVALSSDRNNNLCIKVMIRHTRRPEVGDKFSSRHGQKGVCGT 906

Query: 1026 IVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSDGRFHYGSAFGEPSG 847
            I+QQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG KAGVS GRFHYGSAFGEPSG
Sbjct: 907  IIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGEPSG 966

Query: 846  HAD 838
            HAD
Sbjct: 967  HAD 969



 Score =  285 bits (728), Expect = 9e-74
 Identities = 135/152 (88%), Positives = 145/152 (95%)
 Frame = -3

Query: 749  GKDFIYSGITGEPLQAYIFMGPIYYQKLKHMVLDKMHARGSGPRVMITRQPTEGKSRNGG 570
            GKD IYSGITG PLQAYIFMGPIYYQKLKHMVLDKMHARG+GPRVM+TRQPTEG++RNGG
Sbjct: 987  GKDIIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHARGNGPRVMLTRQPTEGRARNGG 1046

Query: 569  LRVGEMERDCLIAYGASMLIYERLMISSDPFEVQVCRKCGLLGYYNFKLKTGICSTCKNG 390
            LRVGEMERDCLIAYGASMLI+ERLMISSDPFEVQVCR CGLLGY+N KL+ GICSTCKNG
Sbjct: 1047 LRVGEMERDCLIAYGASMLIFERLMISSDPFEVQVCRVCGLLGYFNQKLRAGICSTCKNG 1106

Query: 389  ENISTMKLPYACKLLFQELQAMNIIPRLKLTE 294
            +NISTMKLPYACKLL QELQ+MNI+PRLKL E
Sbjct: 1107 DNISTMKLPYACKLLIQELQSMNIVPRLKLAE 1138


>ref|XP_004141655.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Cucumis
            sativus]
          Length = 1158

 Score = 1509 bits (3906), Expect = 0.0
 Identities = 750/967 (77%), Positives = 840/967 (86%), Gaps = 2/967 (0%)
 Frame = -2

Query: 3729 EMDKQNFAAPVKKAVDKYQLLPEFLKVRGLVKQHLDSFNYFVRTQIKKIVQANDLITSSV 3550
            ++DKQ    P+K AVDK+QLLPEFLKVRGLVKQHLDSFNYFV T+IKKIV+AND I SS 
Sbjct: 25   DIDKQFIGLPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTEIKKIVKANDRIESST 84

Query: 3549 DPNIYLRYKDVWIGEPSVMTDAVTEKLTPHNCRLSDMTYAAPIYVNIEYITGSNNSKQTQ 3370
            DP+IYLR+ DV IGEPSV  +AV+E + PH CRLSD+TYAAPI V+IEYI  S+  K  +
Sbjct: 85   DPSIYLRFLDVRIGEPSVTVNAVSETINPHMCRLSDLTYAAPILVDIEYIEESHAQKAPR 144

Query: 3369 MKRNVVIGRMPIMLRSCRCILHGKDEDELARYGECPLDPGGYFVIKGTEKVILIQEQLSK 3190
             K++VVIGRMPIMLRS  C+LHGKDE ELAR GECPLDPGGYF+IKGTEKV+LIQEQLSK
Sbjct: 145  EKKDVVIGRMPIMLRSRCCVLHGKDEAELARLGECPLDPGGYFIIKGTEKVVLIQEQLSK 204

Query: 3189 NRIIIDTDKKGCVQASVASSTETIKSKTVLKMEKEKIYLYLNQFTS-KVPIMVVLKAMGM 3013
            NRIIIDTDKKG + ASV SSTE  KSKTV+KME EKIYL LN FT+ K+PIMVVLKAMGM
Sbjct: 205  NRIIIDTDKKGNINASVTSSTEATKSKTVIKMENEKIYLQLNIFTTPKIPIMVVLKAMGM 264

Query: 3012 ESDQEVVQMIGRDPRYGELLTPSIEDCVKEAVHTQHQALEFIEQKVKRLPY-STTPQKEG 2836
            ES QEVVQM+GRDPRYG LL PSIE+C KE ++TQ QALE++E KVK+  + S  P+KEG
Sbjct: 265  ESIQEVVQMVGRDPRYGALLLPSIEECAKEKIYTQEQALEYLETKVKKFQFASAPPEKEG 324

Query: 2835 RALSILRDIFIANVPVRENNFRPKCIYAAVMLRRMMEAILNKDTMDDKDYVGNKRLELSG 2656
            RAL ILRD+F+ANVPV +NNF PKCIY AVM+RRMM+AIL+KD MDDKDYVGNKRLELSG
Sbjct: 325  RALGILRDVFLANVPVYKNNFHPKCIYVAVMMRRMMDAILSKDAMDDKDYVGNKRLELSG 384

Query: 2655 QMLSLLFEDLFKTMNDEARKTMDTALSKLHRSSRFDISQYIVKDRITVGLERALSTGNWD 2476
            Q++SLLFEDLFKTM  E +KT+D  L K  RSSRFD SQ++  + I+ GLER LSTGNWD
Sbjct: 385  QLISLLFEDLFKTMVSEVKKTIDKLLGKHSRSSRFDFSQHLNSNIISFGLERTLSTGNWD 444

Query: 2475 VKRFRMHRKGMTQVVARLSYIATLGNMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDTP 2296
            VKRFRMHRKGM+QV+ARLS+I+T+G++T++SPQFEKSRKVSGPRALQPSQWGMLCPCDTP
Sbjct: 445  VKRFRMHRKGMSQVLARLSFISTMGHVTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTP 504

Query: 2295 EGESCGLVKNLALMTHVTTDEVEGPLISMCYTLGVQSLESLSGEDLHMPNSYLIIFNGLI 2116
            EGE+CGLVKNLALMTHVTTD+ EGPLIS+CY LGV+ LE LS E+LH PNS+L+IFNG I
Sbjct: 505  EGEACGLVKNLALMTHVTTDQEEGPLISLCYCLGVEDLELLSAEELHTPNSFLVIFNGRI 564

Query: 2115 LGKHRQPQKFASLMRKLRRTGKIGEFVSIFVNEKQCCVYIASDGGRVCRPLVIADKGVSR 1936
            LGKHR+PQ FA+ MR LRR GKIGEFVS+FVNEKQ CVYIASDGGRVCRPLVIADKGVSR
Sbjct: 565  LGKHRRPQYFATGMRMLRRAGKIGEFVSVFVNEKQHCVYIASDGGRVCRPLVIADKGVSR 624

Query: 1935 IKEHHMKELKDGYRTFHSFLKEGLIEYLDVNEENNALIALYEENANAETTHIEIEPFTIL 1756
            IKE+HMKEL DG RTF  FL++GLIEYLDVNEENNALIALYE  A  ETTHIEIEPFTIL
Sbjct: 625  IKEYHMKELSDGVRTFDDFLRDGLIEYLDVNEENNALIALYEGEATPETTHIEIEPFTIL 684

Query: 1755 GVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLIYLLVYPQRPLLTTRTI 1576
            GV AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQL RMDTL+YLLVYPQRPLLTT+TI
Sbjct: 685  GVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLRRMDTLLYLLVYPQRPLLTTKTI 744

Query: 1575 NLVNYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVIKKMSAVSQKYETG 1396
             LV YDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV KK S+V+QKYE  
Sbjct: 745  ELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVFKKYSSVNQKYENN 804

Query: 1395 VSDRIVRPQREGYEADKMQILDDDGIAAPGQIIRPNDIYINKQSPKDIRSTVGNSKSLSD 1216
             +DRIVRP R       MQILDDDG+AAPG+IIRPNDIY+NKQSP  ++ +      + D
Sbjct: 805  TADRIVRPNRNEDFTGNMQILDDDGLAAPGEIIRPNDIYVNKQSPIIMKGS--PLPGIPD 862

Query: 1215 SQYKPSKQTYKGPEGETPVVDRVSLCSDRNSNLCIKFMIRHTRRPEVGDKFSSRHGQKGV 1036
            + Y+P +Q +KG EGE  VVDRV+L +D+N  LCIKF+IR TRRPE+GDKFSSRHGQKGV
Sbjct: 863  NAYRPCRQIFKGSEGEPTVVDRVALSTDKNDCLCIKFLIRQTRRPELGDKFSSRHGQKGV 922

Query: 1035 CGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSDGRFHYGSAFGE 856
            CGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG KAGVS GRFHYGSAFGE
Sbjct: 923  CGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGE 982

Query: 855  PSGHADK 835
            PSGHADK
Sbjct: 983  PSGHADK 989



 Score =  293 bits (749), Expect = 3e-76
 Identities = 139/152 (91%), Positives = 147/152 (96%)
 Frame = -3

Query: 749  GKDFIYSGITGEPLQAYIFMGPIYYQKLKHMVLDKMHARGSGPRVMITRQPTEGKSRNGG 570
            GKDF+YSGITG PLQAYIFMGPIYYQKLKHMVLDKMHARGSGPRVM+TRQPTEG++RNGG
Sbjct: 1006 GKDFLYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGG 1065

Query: 569  LRVGEMERDCLIAYGASMLIYERLMISSDPFEVQVCRKCGLLGYYNFKLKTGICSTCKNG 390
            LRVGEMERDCLIAYGASMLIYERLMISSDPFEVQVCR CGLLGYYN KLKTGICS+CKNG
Sbjct: 1066 LRVGEMERDCLIAYGASMLIYERLMISSDPFEVQVCRVCGLLGYYNHKLKTGICSSCKNG 1125

Query: 389  ENISTMKLPYACKLLFQELQAMNIIPRLKLTE 294
            +NISTMKLPYACKLL QELQ+MNI+PRLKL E
Sbjct: 1126 DNISTMKLPYACKLLIQELQSMNIVPRLKLAE 1157


>ref|XP_002863522.1| hypothetical protein ARALYDRAFT_917015 [Arabidopsis lyrata subsp.
            lyrata] gi|297309357|gb|EFH39781.1| hypothetical protein
            ARALYDRAFT_917015 [Arabidopsis lyrata subsp. lyrata]
          Length = 1165

 Score = 1501 bits (3886), Expect = 0.0
 Identities = 735/982 (74%), Positives = 846/982 (86%), Gaps = 18/982 (1%)
 Frame = -2

Query: 3726 MDKQNFAAPVKKAVDKYQLLPEFLKVRGLVKQHLDSFNYFVRTQIKKIVQANDLITSSVD 3547
            +DK+  +AP+K   DK+QL+PEFLKVRGLVKQHLDSFNYF+   IKKIV AN  I S  D
Sbjct: 17   IDKEKLSAPIKSTADKFQLVPEFLKVRGLVKQHLDSFNYFINVGIKKIVHANCRIASVTD 76

Query: 3546 PNIYLRYKDVWIGEPSVMTDAVTEKLTPHNCRLSDMTYAAPIYVNIEYITGSNNSKQTQM 3367
            P+IYLR+K+V +GEPS+M   ++E++ PH CRL+DMTYAAPIYVNIEY+ GS+  K T +
Sbjct: 77   PSIYLRFKNVRVGEPSIMNINISEEINPHMCRLADMTYAAPIYVNIEYVHGSHGKKATSV 136

Query: 3366 KRNVVIGRMPIMLRSCRCILHGKDEDELARYGECPLDPGGYFVIKGTEKVILIQEQLSKN 3187
            K + +IGRMPIMLRSCRC+LHGKDE+ELAR GECPLDPGGYFVIKGTEKV+LIQEQLSKN
Sbjct: 137  KNDFIIGRMPIMLRSCRCVLHGKDEEELARLGECPLDPGGYFVIKGTEKVLLIQEQLSKN 196

Query: 3186 RIIIDTDKKGCVQASVASSTETIKSKTVLKMEKEKIYLYLNQFTSKVPIMVVLKAMGMES 3007
            RIIID+DKKG + ASV SSTE  KSKTV++MEKEKIYL+L+QF  K+PI++VLKAMGMES
Sbjct: 197  RIIIDSDKKGNINASVTSSTEMTKSKTVIQMEKEKIYLFLHQFVKKIPIVIVLKAMGMES 256

Query: 3006 DQEVVQMIGRDPRYGELLTPSIEDCVKEAVHTQHQALEFIEQKVKRLPYSTTPQKEGRAL 2827
            DQE+VQM+GRDPR+   L PSIE+CV E V+TQ QAL+++E KVK+  Y   P+K+GRAL
Sbjct: 257  DQEIVQMVGRDPRFSASLLPSIEECVSEGVNTQKQALDYLEAKVKKTSYGPPPEKDGRAL 316

Query: 2826 SILRDIFIANVPVRENNFRPKCIYAAVMLRRMMEAILNKDTMDDKDYVGNKRLELSGQML 2647
             ILRD+F+A+VPVR+NNFR KC Y  VMLRRM+EA+LNKD+MDDKDYVGNKRLELSGQ++
Sbjct: 317  YILRDLFLAHVPVRDNNFRQKCFYVGVMLRRMIEAMLNKDSMDDKDYVGNKRLELSGQLM 376

Query: 2646 SLLFEDLFKTMNDEARKTMDTALSKLHRSSRFDISQYIV----KDRITVGLERALSTGNW 2479
            SLLFEDLFKTM  EA K +D  LSK  R+SRFD SQY+     ++ I+VGLER LSTGN+
Sbjct: 377  SLLFEDLFKTMLSEAIKKVDAILSKPSRASRFDFSQYLTTGDSQNTISVGLERTLSTGNF 436

Query: 2478 DVKRFRMHRKGMTQVVARLSYIATLGNMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDT 2299
            D+KRFRMHRKGMTQV+ RLS+I +LG +TKISPQFEKSRKVSGPR+LQPSQWGMLCPCDT
Sbjct: 437  DIKRFRMHRKGMTQVLTRLSFIGSLGFITKISPQFEKSRKVSGPRSLQPSQWGMLCPCDT 496

Query: 2298 PEGESCGLVKNLALMTHVTTDEVEGPLISMCYTLGVQSLESLSGEDLHMPNSYLIIFNGL 2119
            PEGESCGLVKNLALMTHVTTDE EGPL++MCY LGV  LE LS E+LH P+S+L+I NGL
Sbjct: 497  PEGESCGLVKNLALMTHVTTDEEEGPLVAMCYKLGVTDLEVLSAEELHTPDSFLVILNGL 556

Query: 2118 ILGKHRQPQKFASLMRKLRRTGKIGEFVSIFVNEKQCCVYIASDGGRVCRPLVIADKGVS 1939
            ILGKHR+PQ FA+ +R+LRR GKIGEFVS+F NEKQ CVY+ASDGGRVCRPLVIADKG+S
Sbjct: 557  ILGKHRRPQYFANSLRRLRRAGKIGEFVSVFTNEKQHCVYVASDGGRVCRPLVIADKGIS 616

Query: 1938 RIKEHHMKELKDGYRTFHSFLKEGLIEYLDVNEENNALIALYEENA-------------N 1798
            R+K+HHMKEL+DG RTF  F+++GLIEYLDVNEENNALIALYE  A              
Sbjct: 617  RVKQHHMKELQDGVRTFDDFIRDGLIEYLDVNEENNALIALYESEATTELDEGAEAAKIK 676

Query: 1797 AETTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLIYL 1618
            A+TTHIEIEPFTILGV AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQL RMDTL+YL
Sbjct: 677  ADTTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLNRMDTLLYL 736

Query: 1617 LVYPQRPLLTTRTINLVNYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV 1438
            LVYPQRPLLTTRTI LV YDKLGAGQNATVAVMS SGYDIEDAIVMNKSSLDRGFGRCIV
Sbjct: 737  LVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSNSGYDIEDAIVMNKSSLDRGFGRCIV 796

Query: 1437 IKKMSAVSQKYETGVSDRIVRPQREGYEADKMQILDDDGIAAPGQIIRPNDIYINKQSPK 1258
            +KK+ A  QKYE G  DRI+ PQR G +A+KMQILDDDGIA+PG+IIRPND+YI KQ P 
Sbjct: 797  MKKIVATCQKYENGTVDRILMPQRTGPDAEKMQILDDDGIASPGEIIRPNDVYIYKQIPV 856

Query: 1257 -DIRSTVGNSKSLSDSQYKPSKQTYKGPEGETPVVDRVSLCSDRNSNLCIKFMIRHTRRP 1081
               R  +  +  LSDSQY+P+++ +KGPEGET VVDRV+LCSD++ +LCIK++IRHTRRP
Sbjct: 857  CTTRDKI--TSPLSDSQYRPAREFFKGPEGETQVVDRVALCSDKSGSLCIKYIIRHTRRP 914

Query: 1080 EVGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKA 901
            E+GDKFSSRHGQKGVCGTI+QQEDFPFSE GICPDLIMNPHGFPSRMTVGKMIELLGSKA
Sbjct: 915  ELGDKFSSRHGQKGVCGTIIQQEDFPFSELGICPDLIMNPHGFPSRMTVGKMIELLGSKA 974

Query: 900  GVSDGRFHYGSAFGEPSGHADK 835
            GVS GRFHYGSAFGE SGHADK
Sbjct: 975  GVSCGRFHYGSAFGERSGHADK 996



 Score =  290 bits (743), Expect = 2e-75
 Identities = 134/152 (88%), Positives = 147/152 (96%)
 Frame = -3

Query: 749  GKDFIYSGITGEPLQAYIFMGPIYYQKLKHMVLDKMHARGSGPRVMITRQPTEGKSRNGG 570
            GKD +YSG++GEPL+AYIFMGPIYYQKLKHMVLDKMHARGSGPRVM+TRQPTEGKS+NGG
Sbjct: 1013 GKDLLYSGLSGEPLEAYIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGG 1072

Query: 569  LRVGEMERDCLIAYGASMLIYERLMISSDPFEVQVCRKCGLLGYYNFKLKTGICSTCKNG 390
            LRVGEMERDCLIAYGASMLIYERLMISSDPFEVQVCR CGLLGYYN+KLK  +CSTCKNG
Sbjct: 1073 LRVGEMERDCLIAYGASMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCSTCKNG 1132

Query: 389  ENISTMKLPYACKLLFQELQAMNIIPRLKLTE 294
            +NI+TMKLPYACKLLFQELQ+MN++PRLKL E
Sbjct: 1133 DNIATMKLPYACKLLFQELQSMNVVPRLKLVE 1164