BLASTX nr result

ID: Scutellaria23_contig00003243 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00003243
         (561 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA10101.1| ribosomal protein S28 [Prunus persica] gi|394772...   100   2e-19
ref|XP_002520788.1| ribosomal protein S28, putative [Ricinus com...    99   6e-19
ref|XP_002311925.1| predicted protein [Populus trichocarpa] gi|2...    99   6e-19
gb|AEC10961.1| ribosomal protein s28 [Camellia sinensis]               98   8e-19
emb|CAA10104.1| ribosomal protein S28 [Prunus persica]                 97   1e-18

>emb|CAA10101.1| ribosomal protein S28 [Prunus persica] gi|3947721|emb|CAA10102.1|
           ribosomal protein S28 [Prunus persica]
           gi|3947723|emb|CAA10103.1| ribosomal protein S28 [Prunus
           persica]
          Length = 65

 Score =  100 bits (248), Expect = 2e-19
 Identities = 46/51 (90%), Positives = 51/51 (100%)
 Frame = -2

Query: 461 MDSTIKHAIVVKVIGRTGSRGQVTQVRVKFIDDQNRFIMRNVKGPVREGDV 309
           MDST+KHA+VVKV+GRTGSRGQVTQVRVKF+DDQNRFIMRNVKGPVREGD+
Sbjct: 1   MDSTVKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDI 51


>ref|XP_002520788.1| ribosomal protein S28, putative [Ricinus communis]
           gi|255581574|ref|XP_002531592.1| ribosomal protein S28,
           putative [Ricinus communis] gi|223528788|gb|EEF30795.1|
           ribosomal protein S28, putative [Ricinus communis]
           gi|223539919|gb|EEF41497.1| ribosomal protein S28,
           putative [Ricinus communis] gi|313586485|gb|ADR71253.1|
           40S ribosomal protein S28A [Hevea brasiliensis]
           gi|313586487|gb|ADR71254.1| 40S ribosomal protein S28B
           [Hevea brasiliensis]
          Length = 65

 Score = 98.6 bits (244), Expect = 6e-19
 Identities = 47/51 (92%), Positives = 50/51 (98%)
 Frame = -2

Query: 461 MDSTIKHAIVVKVIGRTGSRGQVTQVRVKFIDDQNRFIMRNVKGPVREGDV 309
           MDS IKHA+VVKV+GRTGSRGQVTQVRVKF+DDQNRFIMRNVKGPVREGDV
Sbjct: 1   MDSQIKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDV 51


>ref|XP_002311925.1| predicted protein [Populus trichocarpa]
           gi|224110082|ref|XP_002315409.1| predicted protein
           [Populus trichocarpa] gi|118481584|gb|ABK92734.1|
           unknown [Populus trichocarpa]
           gi|118481768|gb|ABK92823.1| unknown [Populus
           trichocarpa] gi|118482102|gb|ABK92982.1| unknown
           [Populus trichocarpa] gi|118482699|gb|ABK93268.1|
           unknown [Populus trichocarpa]
           gi|222851745|gb|EEE89292.1| predicted protein [Populus
           trichocarpa] gi|222864449|gb|EEF01580.1| predicted
           protein [Populus trichocarpa]
          Length = 65

 Score = 98.6 bits (244), Expect = 6e-19
 Identities = 46/51 (90%), Positives = 50/51 (98%)
 Frame = -2

Query: 461 MDSTIKHAIVVKVIGRTGSRGQVTQVRVKFIDDQNRFIMRNVKGPVREGDV 309
           MDS IKHA+VVK++GRTGSRGQVTQVRVKFIDDQNRFIMRNVKGPVREGD+
Sbjct: 1   MDSQIKHAVVVKIMGRTGSRGQVTQVRVKFIDDQNRFIMRNVKGPVREGDI 51


>gb|AEC10961.1| ribosomal protein s28 [Camellia sinensis]
          Length = 65

 Score = 98.2 bits (243), Expect = 8e-19
 Identities = 48/51 (94%), Positives = 50/51 (98%)
 Frame = -2

Query: 461 MDSTIKHAIVVKVIGRTGSRGQVTQVRVKFIDDQNRFIMRNVKGPVREGDV 309
           M+S IKHAIVVKV+GRTGSRGQVTQVRVKFIDDQNRFIMRNVKGPVREGDV
Sbjct: 1   MESQIKHAIVVKVMGRTGSRGQVTQVRVKFIDDQNRFIMRNVKGPVREGDV 51


>emb|CAA10104.1| ribosomal protein S28 [Prunus persica]
          Length = 65

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 45/51 (88%), Positives = 50/51 (98%)
 Frame = -2

Query: 461 MDSTIKHAIVVKVIGRTGSRGQVTQVRVKFIDDQNRFIMRNVKGPVREGDV 309
           MDST+KHA+VVKV+GRTGSRGQVTQVRVKF+ DQNRFIMRNVKGPVREGD+
Sbjct: 1   MDSTVKHAVVVKVMGRTGSRGQVTQVRVKFLGDQNRFIMRNVKGPVREGDI 51


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