BLASTX nr result

ID: Scutellaria23_contig00003217 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00003217
         (693 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9M4Y3.1|RR10_MESCR RecName: Full=30S ribosomal protein S10, ...   233   4e-59
emb|CAN74383.1| hypothetical protein VITISV_023801 [Vitis vinifera]   231   1e-58
ref|XP_004150471.1| PREDICTED: 30S ribosomal protein S10, chloro...   230   2e-58
emb|CBI39707.3| unnamed protein product [Vitis vinifera]              229   4e-58
ref|XP_002265045.1| PREDICTED: 30S ribosomal protein S10, chloro...   229   4e-58

>sp|Q9M4Y3.1|RR10_MESCR RecName: Full=30S ribosomal protein S10, chloroplastic; Flags:
           Precursor gi|188036211|pdb|3BBN|J Chain J, Homology
           Model For The Spinach Chloroplast 30s Subunit Fitted To
           9.4a Cryo-Em Map Of The 70s Chlororibosome.
           gi|7578929|gb|AAF64190.1|AF245665_1 plastid ribosomal
           protein S10 precursor [Mesembryanthemum crystallinum]
          Length = 197

 Score =  233 bits (593), Expect = 4e-59
 Identities = 118/139 (84%), Positives = 122/139 (87%), Gaps = 1/139 (0%)
 Frame = +1

Query: 100 RIMAVSEVLESNAI-PATTEDEAPSASKLSIGADSDTVAPKQKIRIKLRSYWVPLIEDSC 276
           R+ A  EVLES    P +  +E    S L IGADSD +APKQKIRIKLRSYWVPLIEDSC
Sbjct: 58  RVFAAPEVLESQETGPESYVEEGSETSALGIGADSDQMAPKQKIRIKLRSYWVPLIEDSC 117

Query: 277 KQIMDAARTTNAKTMGPVPLPTKKRIFCVLKSPHVHKDARFHFEIRTHQRLIDILYPTAQ 456
           KQIMDAARTTNAKTMGPVPLPTKKRIFCVLKSPHVHKDARFHFEIRTHQRLIDILYPTAQ
Sbjct: 118 KQIMDAARTTNAKTMGPVPLPTKKRIFCVLKSPHVHKDARFHFEIRTHQRLIDILYPTAQ 177

Query: 457 TIDSLMQLDLPAGVDVEVK 513
           TIDSLMQLDLPAGVDVEVK
Sbjct: 178 TIDSLMQLDLPAGVDVEVK 196


>emb|CAN74383.1| hypothetical protein VITISV_023801 [Vitis vinifera]
          Length = 203

 Score =  231 bits (589), Expect = 1e-58
 Identities = 117/147 (79%), Positives = 124/147 (84%), Gaps = 9/147 (6%)
 Frame = +1

Query: 100 RIMAVSEVLESNAIPATTED---------EAPSASKLSIGADSDTVAPKQKIRIKLRSYW 252
           R+ A SE+L S   P   ED         E P AS LS+G D+D +APKQKIRIKLRSYW
Sbjct: 56  RVFAASELLSSQETPDGLEDSATIEVEGSETPGASALSMGVDADKMAPKQKIRIKLRSYW 115

Query: 253 VPLIEDSCKQIMDAARTTNAKTMGPVPLPTKKRIFCVLKSPHVHKDARFHFEIRTHQRLI 432
           VPLIEDSCKQIM+AARTTNAKTMGPVPLPTKK+IFCVLKSPHVHKDARFHFEIRTHQRLI
Sbjct: 116 VPLIEDSCKQIMEAARTTNAKTMGPVPLPTKKKIFCVLKSPHVHKDARFHFEIRTHQRLI 175

Query: 433 DILYPTAQTIDSLMQLDLPAGVDVEVK 513
           DILYPTAQTIDSLMQLDLPAGVDVEVK
Sbjct: 176 DILYPTAQTIDSLMQLDLPAGVDVEVK 202


>ref|XP_004150471.1| PREDICTED: 30S ribosomal protein S10, chloroplastic-like [Cucumis
           sativus] gi|449519589|ref|XP_004166817.1| PREDICTED: 30S
           ribosomal protein S10, chloroplastic-like [Cucumis
           sativus]
          Length = 206

 Score =  230 bits (586), Expect = 2e-58
 Identities = 120/174 (68%), Positives = 130/174 (74%), Gaps = 3/174 (1%)
 Frame = +1

Query: 1   FPVCNSSTISSRP-QLSFPXXXXXXXXXXXXXXXRIMAVSEVLESNAIPATTED--EAPS 171
           FP  +S+ +  +P Q SFP                I    E+LE + +     +  E P 
Sbjct: 32  FPASSSTALKLKPLQFSFPSTRLYAAPEVLDSPDTIEPPPEILEGSGVSTLEGEDFEVPG 91

Query: 172 ASKLSIGADSDTVAPKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGPVPLPTKKR 351
            S LSIG D D +APKQKIRIKLRSYWVPLIEDSCKQIMDAAR TNAKTMGPVPLPTKKR
Sbjct: 92  TSALSIGEDVDKLAPKQKIRIKLRSYWVPLIEDSCKQIMDAARNTNAKTMGPVPLPTKKR 151

Query: 352 IFCVLKSPHVHKDARFHFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEVK 513
           I+CVLKSPHVHKDARFHFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEVK
Sbjct: 152 IYCVLKSPHVHKDARFHFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEVK 205


>emb|CBI39707.3| unnamed protein product [Vitis vinifera]
          Length = 200

 Score =  229 bits (584), Expect = 4e-58
 Identities = 116/147 (78%), Positives = 123/147 (83%), Gaps = 9/147 (6%)
 Frame = +1

Query: 100 RIMAVSEVLESNAIPATTED---------EAPSASKLSIGADSDTVAPKQKIRIKLRSYW 252
           R+ A  E+L S   P   ED         E P AS LS+G D+D +APKQKIRIKLRSYW
Sbjct: 53  RVFAAPELLSSQETPDGLEDSATIEVEGSETPGASALSMGVDADKMAPKQKIRIKLRSYW 112

Query: 253 VPLIEDSCKQIMDAARTTNAKTMGPVPLPTKKRIFCVLKSPHVHKDARFHFEIRTHQRLI 432
           VPLIEDSCKQIM+AARTTNAKTMGPVPLPTKK+IFCVLKSPHVHKDARFHFEIRTHQRLI
Sbjct: 113 VPLIEDSCKQIMEAARTTNAKTMGPVPLPTKKKIFCVLKSPHVHKDARFHFEIRTHQRLI 172

Query: 433 DILYPTAQTIDSLMQLDLPAGVDVEVK 513
           DILYPTAQTIDSLMQLDLPAGVDVEVK
Sbjct: 173 DILYPTAQTIDSLMQLDLPAGVDVEVK 199


>ref|XP_002265045.1| PREDICTED: 30S ribosomal protein S10, chloroplastic [Vitis
           vinifera]
          Length = 203

 Score =  229 bits (584), Expect = 4e-58
 Identities = 116/147 (78%), Positives = 123/147 (83%), Gaps = 9/147 (6%)
 Frame = +1

Query: 100 RIMAVSEVLESNAIPATTED---------EAPSASKLSIGADSDTVAPKQKIRIKLRSYW 252
           R+ A  E+L S   P   ED         E P AS LS+G D+D +APKQKIRIKLRSYW
Sbjct: 56  RVFAAPELLSSQETPDGLEDSATIEVEGSETPGASALSMGVDADKMAPKQKIRIKLRSYW 115

Query: 253 VPLIEDSCKQIMDAARTTNAKTMGPVPLPTKKRIFCVLKSPHVHKDARFHFEIRTHQRLI 432
           VPLIEDSCKQIM+AARTTNAKTMGPVPLPTKK+IFCVLKSPHVHKDARFHFEIRTHQRLI
Sbjct: 116 VPLIEDSCKQIMEAARTTNAKTMGPVPLPTKKKIFCVLKSPHVHKDARFHFEIRTHQRLI 175

Query: 433 DILYPTAQTIDSLMQLDLPAGVDVEVK 513
           DILYPTAQTIDSLMQLDLPAGVDVEVK
Sbjct: 176 DILYPTAQTIDSLMQLDLPAGVDVEVK 202


Top