BLASTX nr result

ID: Scutellaria23_contig00003213 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00003213
         (1012 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P34091.1|RL6_MESCR RecName: Full=60S ribosomal protein L6; Al...   280   3e-73
ref|XP_002513192.1| 60S ribosomal protein L6, putative [Ricinus ...   280   5e-73
ref|XP_003546871.1| PREDICTED: 60S ribosomal protein L6-like [Gl...   279   7e-73
ref|XP_002313280.1| predicted protein [Populus trichocarpa] gi|1...   279   9e-73
ref|XP_003531428.1| PREDICTED: 60S ribosomal protein L6-like [Gl...   274   2e-71

>sp|P34091.1|RL6_MESCR RecName: Full=60S ribosomal protein L6; AltName: Full=YL16-like
           gi|19539|emb|CAA49175.1| ribosomal protein YL16
           [Mesembryanthemum crystallinum]
          Length = 234

 Score =  280 bits (717), Expect = 3e-73
 Identities = 151/232 (65%), Positives = 163/232 (70%), Gaps = 3/232 (1%)
 Frame = +2

Query: 65  APKKLKP---RNPELIPGVRKLSRSQMYHKRGLWAIKAKNGGXXXXXXXXXXXXXXXXXX 235
           A K+ KP   RNPEL+ G+ K SRS+MYHKRGLWAIKAKNGG                  
Sbjct: 3   AAKQRKPHVSRNPELVRGIGKYSRSKMYHKRGLWAIKAKNGGVFPKHAPKSADSKAVEKP 62

Query: 236 XXXYPADDVKKPLSNNRKAKATRLRASITPGTVLIILTGRFKGKRVFFLKQLSSGLLLIT 415
              YPADDVKKPL N RK K T+LRASITPGTVLIIL GRFKGKRV FLKQLSSGLLL+T
Sbjct: 63  PKFYPADDVKKPLINKRKPKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLVT 122

Query: 416 GPYKINGVPLRRVNQSYVIGTSTKVDISGVDVEKIDDXXXXXXXXXXXXXXXXXXXXXXX 595
           GP+K+NGVPLRRVNQ+YVI TSTKVDISGV+VEK DD                       
Sbjct: 123 GPFKVNGVPLRRVNQAYVIATSTKVDISGVNVEKFDDKYFGKKAEKKNKKGEGEFFEAEK 182

Query: 596 XXXNTLPVEKKEDQKAVDATLLKAIESVPDLKAYLGARFSLKAGSKPHELVF 751
              N LP EKK+DQKAVD  LLKAIE VP+LKAYLGARFSLKAG KPHELVF
Sbjct: 183 KEVNVLPQEKKDDQKAVDVALLKAIEGVPELKAYLGARFSLKAGMKPHELVF 234


>ref|XP_002513192.1| 60S ribosomal protein L6, putative [Ricinus communis]
           gi|223547690|gb|EEF49183.1| 60S ribosomal protein L6,
           putative [Ricinus communis]
          Length = 233

 Score =  280 bits (715), Expect = 5e-73
 Identities = 151/233 (64%), Positives = 163/233 (69%), Gaps = 3/233 (1%)
 Frame = +2

Query: 62  MAPKKLKP---RNPELIPGVRKLSRSQMYHKRGLWAIKAKNGGXXXXXXXXXXXXXXXXX 232
           MAPK   P   RNP+L+ G+ K SRSQMYHKRGLWAIKAKNGG                 
Sbjct: 1   MAPKTRTPKVNRNPDLVRGIGKYSRSQMYHKRGLWAIKAKNGGVFPKHDPKPKPAAPAEK 60

Query: 233 XXXXYPADDVKKPLSNNRKAKATRLRASITPGTVLIILTGRFKGKRVFFLKQLSSGLLLI 412
               YPADDVKKPL N RK K T+LRASITPGTVLIIL GRFKGKRV FLKQLSSGLLLI
Sbjct: 61  PPKFYPADDVKKPLLNKRKPKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLI 120

Query: 413 TGPYKINGVPLRRVNQSYVIGTSTKVDISGVDVEKIDDXXXXXXXXXXXXXXXXXXXXXX 592
           TGP+KINGVPLRRVNQSYVI TSTKVDISGV+V+K DD                      
Sbjct: 121 TGPFKINGVPLRRVNQSYVIATSTKVDISGVNVDKFDDKFFAKQAEKKKKKGEGEFFEAE 180

Query: 593 XXXXNTLPVEKKEDQKAVDATLLKAIESVPDLKAYLGARFSLKAGSKPHELVF 751
               N LP EKK+DQK VDA L+K+IE+VP+LKAYL ARFSLKAG KPHELVF
Sbjct: 181 KDEKNVLPQEKKDDQKTVDAALIKSIEAVPELKAYLAARFSLKAGMKPHELVF 233


>ref|XP_003546871.1| PREDICTED: 60S ribosomal protein L6-like [Glycine max]
          Length = 232

 Score =  279 bits (714), Expect = 7e-73
 Identities = 149/232 (64%), Positives = 163/232 (70%), Gaps = 2/232 (0%)
 Frame = +2

Query: 62  MAPKKLKP--RNPELIPGVRKLSRSQMYHKRGLWAIKAKNGGXXXXXXXXXXXXXXXXXX 235
           MAPKK +   RNP+L+ G+ K SRSQMYHKRG+WAIKAKNGG                  
Sbjct: 1   MAPKKPRTTTRNPDLVRGIGKYSRSQMYHKRGIWAIKAKNGGVLPRHDPKPKPEAPAQKP 60

Query: 236 XXXYPADDVKKPLSNNRKAKATRLRASITPGTVLIILTGRFKGKRVFFLKQLSSGLLLIT 415
              YPADDVKKPL N  K K  +LRASITPGTVLI+L GRFKGKRV FLKQL SGLLL+T
Sbjct: 61  PKFYPADDVKKPLVNKHKPKPAKLRASITPGTVLILLAGRFKGKRVVFLKQLPSGLLLVT 120

Query: 416 GPYKINGVPLRRVNQSYVIGTSTKVDISGVDVEKIDDXXXXXXXXXXXXXXXXXXXXXXX 595
           GP+KINGVPLRRVNQSYVIGTSTKVDISGV+V+K DD                       
Sbjct: 121 GPFKINGVPLRRVNQSYVIGTSTKVDISGVNVDKFDDKYFAKEAKKKKTKGEGEFFEAEK 180

Query: 596 XXXNTLPVEKKEDQKAVDATLLKAIESVPDLKAYLGARFSLKAGSKPHELVF 751
              N LP EKK+DQK VD TLLKAIE+VPDLK+YLGARFSLKAG KPHELVF
Sbjct: 181 EEKNVLPQEKKDDQKTVDTTLLKAIENVPDLKSYLGARFSLKAGVKPHELVF 232


>ref|XP_002313280.1| predicted protein [Populus trichocarpa] gi|118482298|gb|ABK93076.1|
           unknown [Populus trichocarpa]
           gi|222849688|gb|EEE87235.1| predicted protein [Populus
           trichocarpa]
          Length = 232

 Score =  279 bits (713), Expect = 9e-73
 Identities = 150/232 (64%), Positives = 162/232 (69%), Gaps = 2/232 (0%)
 Frame = +2

Query: 62  MAPKKLKP--RNPELIPGVRKLSRSQMYHKRGLWAIKAKNGGXXXXXXXXXXXXXXXXXX 235
           MAP+K     RNP+L+ G+ K SRSQMYHKRGLWAIKAKNGG                  
Sbjct: 1   MAPRKTPQVSRNPDLVRGIGKYSRSQMYHKRGLWAIKAKNGGVFPKHAPKVKDAAPAEKP 60

Query: 236 XXXYPADDVKKPLSNNRKAKATRLRASITPGTVLIILTGRFKGKRVFFLKQLSSGLLLIT 415
              YPADDVKKPL N RK K T+LR SITPGTVLIIL GRFKGKRV FLKQL SGLLL+T
Sbjct: 61  PKFYPADDVKKPLPNRRKPKPTKLRDSITPGTVLIILVGRFKGKRVVFLKQLPSGLLLVT 120

Query: 416 GPYKINGVPLRRVNQSYVIGTSTKVDISGVDVEKIDDXXXXXXXXXXXXXXXXXXXXXXX 595
           GP+KINGVPLRRVNQSYVIGTSTKVDISGV+VEK DD                       
Sbjct: 121 GPFKINGVPLRRVNQSYVIGTSTKVDISGVNVEKFDDKYFGKKAEKKKKKGEGNFFEADK 180

Query: 596 XXXNTLPVEKKEDQKAVDATLLKAIESVPDLKAYLGARFSLKAGSKPHELVF 751
              N LP EKK+DQKAVDA L+K++E VPDLKAYLGARFSLK G KPHELVF
Sbjct: 181 EGENALPQEKKDDQKAVDAPLIKSLECVPDLKAYLGARFSLKDGMKPHELVF 232


>ref|XP_003531428.1| PREDICTED: 60S ribosomal protein L6-like [Glycine max]
          Length = 232

 Score =  274 bits (701), Expect = 2e-71
 Identities = 147/232 (63%), Positives = 161/232 (69%), Gaps = 2/232 (0%)
 Frame = +2

Query: 62  MAPKKLKP--RNPELIPGVRKLSRSQMYHKRGLWAIKAKNGGXXXXXXXXXXXXXXXXXX 235
           MAPKK +   RNP+L+ G+ K SRSQMYHKRG+WAIKAKNGG                  
Sbjct: 1   MAPKKPRTTSRNPDLVRGIGKYSRSQMYHKRGIWAIKAKNGGVLPLHDPKPKPEAPAQKP 60

Query: 236 XXXYPADDVKKPLSNNRKAKATRLRASITPGTVLIILTGRFKGKRVFFLKQLSSGLLLIT 415
              YPADDVKKPL N  K K  +LRASITPGTVLI+L GRFKGKRV FLKQL SGLLL+T
Sbjct: 61  PKFYPADDVKKPLVNKHKPKPAKLRASITPGTVLILLAGRFKGKRVVFLKQLPSGLLLVT 120

Query: 416 GPYKINGVPLRRVNQSYVIGTSTKVDISGVDVEKIDDXXXXXXXXXXXXXXXXXXXXXXX 595
           GP+KINGVPLRRVNQSYVIGTSTKVDIS V+V+K DD                       
Sbjct: 121 GPFKINGVPLRRVNQSYVIGTSTKVDISDVNVDKFDDKYFAKEAKKKKTKGEGEFFEAEK 180

Query: 596 XXXNTLPVEKKEDQKAVDATLLKAIESVPDLKAYLGARFSLKAGSKPHELVF 751
              N LP EKK+DQK VD  LLKAIESVP+LK+YLGARFSLKAG KPHELVF
Sbjct: 181 EEKNVLPQEKKDDQKTVDTALLKAIESVPELKSYLGARFSLKAGVKPHELVF 232


Top