BLASTX nr result

ID: Scutellaria23_contig00003142 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00003142
         (1056 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_174202.1| 50S ribosomal protein L34 [Arabidopsis thaliana...    83   1e-13
gb|AFK45087.1| unknown [Lotus japonicus]                               81   4e-13
gb|AFK43276.1| unknown [Lotus japonicus]                               81   4e-13
ref|XP_002890790.1| ribosomal protein L34 family protein [Arabid...    81   4e-13
ref|XP_004134668.1| PREDICTED: 50S ribosomal protein L34, chloro...    80   8e-13

>ref|NP_174202.1| 50S ribosomal protein L34 [Arabidopsis thaliana]
           gi|75311421|sp|Q9LP37.1|RK34_ARATH RecName: Full=50S
           ribosomal protein L34, chloroplastic; AltName:
           Full=CL34; Flags: Precursor
           gi|9502428|gb|AAF88127.1|AC021043_20 Putative ribosomal
           protein L34 [Arabidopsis thaliana]
           gi|17380840|gb|AAL36232.1| putative plastid ribosomal
           protein L34 precursor [Arabidopsis thaliana]
           gi|20259639|gb|AAM14176.1| putative plastid ribosomal
           protein L34 precursor [Arabidopsis thaliana]
           gi|21536900|gb|AAM61232.1| plastid ribosomal protein L34
           precursor, putative [Arabidopsis thaliana]
           gi|332192918|gb|AEE31039.1| 50S ribosomal protein L34
           [Arabidopsis thaliana]
          Length = 157

 Score = 82.8 bits (203), Expect = 1e-13
 Identities = 42/68 (61%), Positives = 48/68 (70%)
 Frame = -3

Query: 724 KRRGLVVRAGKYTLCQTKRNRSRKSLARTHGFRKRMSTTXXXXXXXXXXXXXRWTLCTKT 545
           +RRGLVVRAGK  LCQTKR+RSRKSLARTHGFR+RM TT             RW LC K+
Sbjct: 90  RRRGLVVRAGKAALCQTKRSRSRKSLARTHGFRRRMRTTSGRATIKRRRAKGRWNLCPKS 149

Query: 544 HHRTGKRA 521
           +  +GKRA
Sbjct: 150 NPSSGKRA 157


>gb|AFK45087.1| unknown [Lotus japonicus]
          Length = 146

 Score = 81.3 bits (199), Expect = 4e-13
 Identities = 44/67 (65%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
 Frame = -3

Query: 724 KRRGLVVRAGK-YTLCQTKRNRSRKSLARTHGFRKRMSTTXXXXXXXXXXXXXRWTLCTK 548
           KRRGLVVRAGK + LCQTKRNRSRKSLARTHGFR+RM TT             R  LCTK
Sbjct: 80  KRRGLVVRAGKKFALCQTKRNRSRKSLARTHGFRRRMRTTGGRAILRRRRAKGRKVLCTK 139

Query: 547 THHRTGK 527
           TH  +GK
Sbjct: 140 THPNSGK 146


>gb|AFK43276.1| unknown [Lotus japonicus]
          Length = 146

 Score = 81.3 bits (199), Expect = 4e-13
 Identities = 44/67 (65%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
 Frame = -3

Query: 724 KRRGLVVRAGK-YTLCQTKRNRSRKSLARTHGFRKRMSTTXXXXXXXXXXXXXRWTLCTK 548
           KRRGLVVRAGK + LCQTKRNRSRKSLARTHGFR+RM TT             R  LCTK
Sbjct: 80  KRRGLVVRAGKKFALCQTKRNRSRKSLARTHGFRRRMRTTGGRAILRRRRAKGRKVLCTK 139

Query: 547 THHRTGK 527
           TH  +GK
Sbjct: 140 THPNSGK 146


>ref|XP_002890790.1| ribosomal protein L34 family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297336632|gb|EFH67049.1| ribosomal protein
           L34 family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 159

 Score = 81.3 bits (199), Expect = 4e-13
 Identities = 41/70 (58%), Positives = 48/70 (68%)
 Frame = -3

Query: 730 ADKRRGLVVRAGKYTLCQTKRNRSRKSLARTHGFRKRMSTTXXXXXXXXXXXXXRWTLCT 551
           + + RGLVVRAGK  LCQTKR+RSRKSLARTHGFR+RM TT             RW LC 
Sbjct: 90  SQRHRGLVVRAGKAALCQTKRSRSRKSLARTHGFRRRMRTTSGRATIKRRRAKGRWNLCP 149

Query: 550 KTHHRTGKRA 521
           K++  +GKRA
Sbjct: 150 KSNPSSGKRA 159


>ref|XP_004134668.1| PREDICTED: 50S ribosomal protein L34, chloroplastic-like [Cucumis
           sativus] gi|449479241|ref|XP_004155546.1| PREDICTED: 50S
           ribosomal protein L34, chloroplastic-like [Cucumis
           sativus]
          Length = 155

 Score = 80.1 bits (196), Expect = 8e-13
 Identities = 43/68 (63%), Positives = 47/68 (69%)
 Frame = -3

Query: 724 KRRGLVVRAGKYTLCQTKRNRSRKSLARTHGFRKRMSTTXXXXXXXXXXXXXRWTLCTKT 545
           K RGLVVRAGK  LCQTKRNRSRKSLARTHGFR+RM TT             R  LCTK+
Sbjct: 88  KGRGLVVRAGKAALCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKS 147

Query: 544 HHRTGKRA 521
           +  +GKRA
Sbjct: 148 NPSSGKRA 155


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