BLASTX nr result

ID: Scutellaria23_contig00003104 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00003104
         (615 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004135188.1| PREDICTED: uncharacterized protein LOC101221...    96   2e-34
ref|XP_002315796.1| predicted protein [Populus trichocarpa] gi|2...    94   4e-34
ref|XP_002890050.1| hypothetical protein ARALYDRAFT_312432 [Arab...    96   3e-33
gb|AAF43934.1|AC012188_11 Contains similarity to Vip1 protein fr...    96   6e-33
ref|NP_563947.1| NAD(P)-linked oxidoreductase-like protein [Arab...    96   6e-33

>ref|XP_004135188.1| PREDICTED: uncharacterized protein LOC101221820 [Cucumis sativus]
           gi|449478434|ref|XP_004155317.1| PREDICTED:
           uncharacterized protein LOC101231077 [Cucumis sativus]
          Length = 197

 Score = 95.5 bits (236), Expect(2) = 2e-34
 Identities = 44/47 (93%), Positives = 47/47 (100%)
 Frame = +1

Query: 421 QVVPRFIGEWGDVIITLKDGTKVDLRSVPKFRDIAKYCLSMADKPAV 561
           QVVPRFIGEWGDV+ITL+DGTKVDLRSVPKFR+IAKYCLSMADKPAV
Sbjct: 142 QVVPRFIGEWGDVVITLQDGTKVDLRSVPKFREIAKYCLSMADKPAV 188



 Score = 76.3 bits (186), Expect(2) = 2e-34
 Identities = 37/41 (90%), Positives = 40/41 (97%)
 Frame = +2

Query: 218 LAAVFRAFYLRYRFTNLRVTVISGLTGQDRSDFAYDVIKDV 340
           LAAV RAFYLRYRFTNLRVTVISGLTG+DRSDF+Y+VIKDV
Sbjct: 101 LAAVSRAFYLRYRFTNLRVTVISGLTGEDRSDFSYNVIKDV 141


>ref|XP_002315796.1| predicted protein [Populus trichocarpa] gi|222864836|gb|EEF01967.1|
           predicted protein [Populus trichocarpa]
          Length = 199

 Score = 94.0 bits (232), Expect(2) = 4e-34
 Identities = 43/47 (91%), Positives = 46/47 (97%)
 Frame = +1

Query: 421 QVVPRFIGEWGDVIITLKDGTKVDLRSVPKFRDIAKYCLSMADKPAV 561
           QVVPRFIGEWGDV+ITLKDGTKVDLRSVPKFR+IAKYCLSMA+KP V
Sbjct: 142 QVVPRFIGEWGDVVITLKDGTKVDLRSVPKFREIAKYCLSMAEKPVV 188



 Score = 76.6 bits (187), Expect(2) = 4e-34
 Identities = 38/41 (92%), Positives = 39/41 (95%)
 Frame = +2

Query: 218 LAAVFRAFYLRYRFTNLRVTVISGLTGQDRSDFAYDVIKDV 340
           LAAV RAFYLRYRFTNLRVTVISGLTGQDRSDF+Y VIKDV
Sbjct: 101 LAAVSRAFYLRYRFTNLRVTVISGLTGQDRSDFSYKVIKDV 141


>ref|XP_002890050.1| hypothetical protein ARALYDRAFT_312432 [Arabidopsis lyrata subsp.
           lyrata] gi|297335892|gb|EFH66309.1| hypothetical protein
           ARALYDRAFT_312432 [Arabidopsis lyrata subsp. lyrata]
          Length = 431

 Score = 95.5 bits (236), Expect(2) = 3e-33
 Identities = 44/47 (93%), Positives = 47/47 (100%)
 Frame = +1

Query: 421 QVVPRFIGEWGDVIITLKDGTKVDLRSVPKFRDIAKYCLSMADKPAV 561
           QVVPRFIGEWGD+IITLKDGTKVDLRSVPKFR+IAKYCLSMAD+PAV
Sbjct: 376 QVVPRFIGEWGDIIITLKDGTKVDLRSVPKFREIAKYCLSMADQPAV 422



 Score = 72.0 bits (175), Expect(2) = 3e-33
 Identities = 36/41 (87%), Positives = 38/41 (92%)
 Frame = +2

Query: 218 LAAVFRAFYLRYRFTNLRVTVISGLTGQDRSDFAYDVIKDV 340
           LAAV RAF LRYRFTNLRVTVISGLTG+DRSDF+Y VIKDV
Sbjct: 335 LAAVSRAFNLRYRFTNLRVTVISGLTGEDRSDFSYKVIKDV 375


>gb|AAF43934.1|AC012188_11 Contains similarity to Vip1 protein from Schizosaccharomyces pombe
           gb|Y13635.1 and contains a RNA recognition motif
           PF|00076. EST gb|AI996906 comes from this gene
           [Arabidopsis thaliana]
          Length = 431

 Score = 95.5 bits (236), Expect(2) = 6e-33
 Identities = 44/47 (93%), Positives = 47/47 (100%)
 Frame = +1

Query: 421 QVVPRFIGEWGDVIITLKDGTKVDLRSVPKFRDIAKYCLSMADKPAV 561
           QVVPRFIGEWGD+IITLKDGTKVDLRSVPKFR+IAKYCLSMAD+PAV
Sbjct: 376 QVVPRFIGEWGDIIITLKDGTKVDLRSVPKFREIAKYCLSMADQPAV 422



 Score = 71.2 bits (173), Expect(2) = 6e-33
 Identities = 36/41 (87%), Positives = 37/41 (90%)
 Frame = +2

Query: 218 LAAVFRAFYLRYRFTNLRVTVISGLTGQDRSDFAYDVIKDV 340
           LAAV RAF LRYRFTNLRVTVISGLTG DRSDF+Y VIKDV
Sbjct: 335 LAAVSRAFNLRYRFTNLRVTVISGLTGDDRSDFSYKVIKDV 375


>ref|NP_563947.1| NAD(P)-linked oxidoreductase-like protein [Arabidopsis thaliana]
           gi|15292967|gb|AAK93594.1| unknown protein [Arabidopsis
           thaliana] gi|21281179|gb|AAM45014.1| unknown protein
           [Arabidopsis thaliana] gi|21554002|gb|AAM63083.1|
           unknown [Arabidopsis thaliana]
           gi|62318554|dbj|BAD94923.1| hypothetical protein
           [Arabidopsis thaliana] gi|332191028|gb|AEE29149.1|
           NAD(P)-linked oxidoreductase-like protein [Arabidopsis
           thaliana]
          Length = 196

 Score = 95.5 bits (236), Expect(2) = 6e-33
 Identities = 44/47 (93%), Positives = 47/47 (100%)
 Frame = +1

Query: 421 QVVPRFIGEWGDVIITLKDGTKVDLRSVPKFRDIAKYCLSMADKPAV 561
           QVVPRFIGEWGD+IITLKDGTKVDLRSVPKFR+IAKYCLSMAD+PAV
Sbjct: 141 QVVPRFIGEWGDIIITLKDGTKVDLRSVPKFREIAKYCLSMADQPAV 187



 Score = 71.2 bits (173), Expect(2) = 6e-33
 Identities = 36/41 (87%), Positives = 37/41 (90%)
 Frame = +2

Query: 218 LAAVFRAFYLRYRFTNLRVTVISGLTGQDRSDFAYDVIKDV 340
           LAAV RAF LRYRFTNLRVTVISGLTG DRSDF+Y VIKDV
Sbjct: 100 LAAVSRAFNLRYRFTNLRVTVISGLTGDDRSDFSYKVIKDV 140


Top