BLASTX nr result

ID: Scutellaria23_contig00003096 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00003096
         (787 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283507.1| PREDICTED: E3 ubiquitin-protein ligase RHA2A...   154   2e-35
ref|XP_002312419.1| predicted protein [Populus trichocarpa] gi|2...   143   4e-32
ref|XP_002314830.1| predicted protein [Populus trichocarpa] gi|2...   135   1e-29
ref|XP_002526304.1| conserved hypothetical protein [Ricinus comm...   132   1e-28
ref|XP_003536661.1| PREDICTED: E3 ubiquitin-protein ligase RHA2A...   116   5e-24

>ref|XP_002283507.1| PREDICTED: E3 ubiquitin-protein ligase RHA2A-like [Vitis vinifera]
          Length = 162

 Score =  154 bits (389), Expect = 2e-35
 Identities = 75/119 (63%), Positives = 88/119 (73%)
 Frame = +3

Query: 306 FDSEHHQSGSSLYDVVGSGLAGVIFLCEQLNLNRVYSYTNQSDVGTDRSCSDCVVCLNRF 485
           FD++  + G  L   VGSGLA +I L EQLNLNRV+SY    D G   + SDCVVCL R 
Sbjct: 46  FDADEVEDG--LLGAVGSGLASLIVLAEQLNLNRVFSYRYGEDGG---AASDCVVCLCRL 100

Query: 486 ADGDNVRKLACCHVFHKDCFDGWLQHLNFSCPLCRAPLVSDERVGYQRRRVAGNLLAWF 662
            DGD VR+LAC HVFHK+CFDGWL HLNF+CPLCR+PLVSDERV   +RRV G+L+ WF
Sbjct: 101 RDGDQVRRLACRHVFHKECFDGWLDHLNFNCPLCRSPLVSDERVALTQRRVGGDLVTWF 159


>ref|XP_002312419.1| predicted protein [Populus trichocarpa] gi|222852239|gb|EEE89786.1|
           predicted protein [Populus trichocarpa]
          Length = 168

 Score =  143 bits (361), Expect = 4e-32
 Identities = 72/116 (62%), Positives = 78/116 (67%), Gaps = 2/116 (1%)
 Frame = +3

Query: 321 HQSGSSLYDVVGSGLAGVIFLCEQLNLNRV--YSYTNQSDVGTDRSCSDCVVCLNRFADG 494
           H     L   +GSGLAG+I L EQ  LNRV  Y Y    D G D+  SDCVVCL    DG
Sbjct: 50  HVMDDRLMGSMGSGLAGLIVLAEQRKLNRVFAYKYCCGRDDGNDKGGSDCVVCLCTLRDG 109

Query: 495 DNVRKLACCHVFHKDCFDGWLQHLNFSCPLCRAPLVSDERVGYQRRRVAGNLLAWF 662
           D VRKL C HVFHK+CFDGWL HLNF+CPLCR PLVSDERV   RRRV  NL+ WF
Sbjct: 110 DQVRKLDCRHVFHKECFDGWLDHLNFNCPLCRWPLVSDERVEETRRRVGENLVEWF 165


>ref|XP_002314830.1| predicted protein [Populus trichocarpa] gi|222863870|gb|EEF01001.1|
           predicted protein [Populus trichocarpa]
          Length = 169

 Score =  135 bits (339), Expect = 1e-29
 Identities = 67/116 (57%), Positives = 77/116 (66%), Gaps = 3/116 (2%)
 Frame = +3

Query: 321 HQSGSSLYDVVGSGLAGVIFLCEQLNLNRVYSYTN--QSDVGT-DRSCSDCVVCLNRFAD 491
           H     L   +GSG AG+I L EQ  LNRV+SY      D  T D+  SDCVVCL     
Sbjct: 50  HVMDDGLLGSIGSGFAGLIVLAEQRKLNRVFSYKYCCGGDSNTNDKGGSDCVVCLCTLRH 109

Query: 492 GDNVRKLACCHVFHKDCFDGWLQHLNFSCPLCRAPLVSDERVGYQRRRVAGNLLAW 659
           GD VR+L CCHVFHK+CFDGWL HLNF+CPLCR PLVSDERV   RRRV  +++ W
Sbjct: 110 GDQVRRLDCCHVFHKECFDGWLDHLNFNCPLCRWPLVSDERVEETRRRVGADVVDW 165


>ref|XP_002526304.1| conserved hypothetical protein [Ricinus communis]
           gi|223534385|gb|EEF36093.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 183

 Score =  132 bits (331), Expect = 1e-28
 Identities = 67/122 (54%), Positives = 82/122 (67%), Gaps = 14/122 (11%)
 Frame = +3

Query: 339 LYDVVGSGLAGVIFLCEQLNLNRVYSYTNQSDVGTDRSC--------------SDCVVCL 476
           L D +GSGL+ +I L EQLN+NR++SY  +S  G D +               SDCVVCL
Sbjct: 59  LIDSMGSGLSSLIVLAEQLNVNRLFSYRYRSCGGNDDNHNRGGAGAGAGGGGGSDCVVCL 118

Query: 477 NRFADGDNVRKLACCHVFHKDCFDGWLQHLNFSCPLCRAPLVSDERVGYQRRRVAGNLLA 656
              +DGD VRKL C HVFHKDCFD WL+ L F+CPLCR+PLVS +RV   R RVAG+L+A
Sbjct: 119 CALSDGDQVRKLDCRHVFHKDCFDDWLRQLKFNCPLCRSPLVSGQRVLSTRSRVAGDLVA 178

Query: 657 WF 662
           WF
Sbjct: 179 WF 180


>ref|XP_003536661.1| PREDICTED: E3 ubiquitin-protein ligase RHA2A-like [Glycine max]
          Length = 169

 Score =  116 bits (291), Expect = 5e-24
 Identities = 55/110 (50%), Positives = 67/110 (60%), Gaps = 3/110 (2%)
 Frame = +3

Query: 351 VGSGLAGVIFLCEQLNLNRVYSYTNQSDVGT---DRSCSDCVVCLNRFADGDNVRKLACC 521
           VGSGLAG+I L +QL L+  + + +         D     CVVC   F DGD VR L C 
Sbjct: 60  VGSGLAGLIMLSDQLTLSSQFFHHHHGTAAGHDHDHDHHPCVVCQATFEDGDQVRMLPCR 119

Query: 522 HVFHKDCFDGWLQHLNFSCPLCRAPLVSDERVGYQRRRVAGNLLAWFPFH 671
           HVFH+ CFDGWL H  F+CPLCR+PL SDERV    RR+   L++WF  H
Sbjct: 120 HVFHRRCFDGWLHHYKFNCPLCRSPLFSDERVALTERRLGQQLISWFSLH 169


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