BLASTX nr result

ID: Scutellaria23_contig00003018 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00003018
         (897 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273630.1| PREDICTED: RING-H2 finger protein ATL57-like...   186   5e-45
ref|XP_002880959.1| predicted protein [Arabidopsis lyrata subsp....   146   6e-33
ref|NP_180361.1| RING-H2 finger protein ATL57 [Arabidopsis thali...   144   4e-32
ref|XP_002523741.1| zinc finger protein, putative [Ricinus commu...   132   8e-29
ref|XP_003578264.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-...   119   1e-24

>ref|XP_002273630.1| PREDICTED: RING-H2 finger protein ATL57-like [Vitis vinifera]
          Length = 244

 Score =  186 bits (473), Expect = 5e-45
 Identities = 103/213 (48%), Positives = 133/213 (62%), Gaps = 15/213 (7%)
 Frame = +1

Query: 238 NSVAAAVRRPFN--PTTPFDSSMALTILVLLTALFFLGFFSVYIRRFXXXXXXXXXXXXX 411
           +S  +  +R  N  P TPFDSSMALT++VLLTALFF+GFFSVYIRRF             
Sbjct: 34  SSSTSGFKRSLNRQPNTPFDSSMALTVIVLLTALFFMGFFSVYIRRFAEDNAVEMSRRRR 93

Query: 412 XXXSKGGA---------GLDASAVDSLPLVSYGRTSKHPMIDDCPICLSEFHEKETVKLI 564
                  +         GLDAS V SLPL SY   +K  +  DCP+CL++F +K+TVK+I
Sbjct: 94  HPNPPASSSSRSPTPSKGLDASTVSSLPLFSYHGDAKETL--DCPVCLTQFEDKDTVKII 151

Query: 565 PYCGHVFHPGCLDTWLASHVTCPLCRSTELF-KKEVCLDVAPDTKDIPAPEIAERSTAQN 741
           PYC HVFHP C+DTWL+SHV+CP+CRST+LF  K+    V  +  D    +  ER TA +
Sbjct: 152 PYCRHVFHPPCIDTWLSSHVSCPVCRSTQLFPAKDGRCSVVQEGSDEGGSQSHERLTADD 211

Query: 742 GDTWSHER---VRRSCSCTSLPNRAMLQRSTSF 831
           GDT+       VRR+ SC+SL  RA+L R++SF
Sbjct: 212 GDTYVEVESLAVRRTTSCSSLGERALLHRTSSF 244


>ref|XP_002880959.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297326798|gb|EFH57218.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 234

 Score =  146 bits (369), Expect = 6e-33
 Identities = 89/207 (42%), Positives = 111/207 (53%), Gaps = 19/207 (9%)
 Frame = +1

Query: 265 PFNPTTPFDSSMALTILVLLTALFFLGFFSVYIRRFXXXXXXXXXXXXXXXXSKGG---- 432
           P  P +  DSSMALTI VLL ALFF+GFFSVYI  F                S+      
Sbjct: 38  PPEPPSALDSSMALTIFVLLVALFFMGFFSVYIHHFVDDSTVEISSIPRTRSSRMSPRRL 97

Query: 433 -------------AGLDASAVDSLPLVSYGRTSKHPMIDDCPICLSEFHEKETVKLIPYC 573
                         GLD+  V SLP+  Y + +K    +DC ICLSEF E ETVK+IP+C
Sbjct: 98  STSVVVSRPYSYRRGLDSQTVRSLPVYHYTKATKQ-RNEDCVICLSEFEEGETVKVIPHC 156

Query: 574 GHVFHPGCLDTWLASHVTCPLCRSTELFKKEVCLDVAPDTKDIPAPEIAERSTAQNGDTW 753
           GHVFH  C+DTWL+S+VTCPLCRS +LF            KD+   E  ++ +++  DT 
Sbjct: 157 GHVFHVDCVDTWLSSYVTCPLCRSNQLF----------SDKDLGMQEPPDQGSSEEHDTC 206

Query: 754 S--HERVRRSCSCTSLPNRAMLQRSTS 828
                 VRR  SC+SL  R  L+RS S
Sbjct: 207 DVVDPCVRRCSSCSSLGQRTGLERSLS 233


>ref|NP_180361.1| RING-H2 finger protein ATL57 [Arabidopsis thaliana]
           gi|68565332|sp|Q9SJJ7.1|ATL57_ARATH RecName:
           Full=RING-H2 finger protein ATL57
           gi|4510422|gb|AAD21508.1| putative RING zinc finger
           protein [Arabidopsis thaliana]
           gi|26452105|dbj|BAC43142.1| putative RING finger protein
           [Arabidopsis thaliana] gi|28950793|gb|AAO63320.1|
           At2g27940 [Arabidopsis thaliana]
           gi|330252968|gb|AEC08062.1| RING-H2 finger protein ATL57
           [Arabidopsis thaliana]
          Length = 237

 Score =  144 bits (362), Expect = 4e-32
 Identities = 87/209 (41%), Positives = 110/209 (52%), Gaps = 21/209 (10%)
 Frame = +1

Query: 265 PFNPTTPFDSSMALTILVLLTALFFLGFFSVYIRRFXXXXXXXXXXXXXXXXSKGGA--- 435
           P  P +  DS+MALTI +LL ALFF+GFFSVY R F                        
Sbjct: 39  PPQPPSALDSTMALTIFILLVALFFMGFFSVYFRHFADSSSSTVDISSMPRTRSSRMSPR 98

Query: 436 ----------------GLDASAVDSLPLVSYGRTSKHPMIDDCPICLSEFHEKETVKLIP 567
                           GLD+ AV SLP+  Y + +K    +DC ICLS+F E ETVK+IP
Sbjct: 99  RLSTSVVVSRPYSFRRGLDSQAVRSLPVYRYTKAAKQRN-EDCVICLSDFEEGETVKVIP 157

Query: 568 YCGHVFHPGCLDTWLASHVTCPLCRSTELFKKEVCLDVAPDTKDIPAPEIAERSTAQNGD 747
           +CGHVFH  C+DTWL+S+VTCPLCRS +LF            KD+   E  ++ +A+  D
Sbjct: 158 HCGHVFHVDCVDTWLSSYVTCPLCRSNQLF----------SDKDLGMQEPPDQDSAEEHD 207

Query: 748 TWS--HERVRRSCSCTSLPNRAMLQRSTS 828
           T       VRR  SC+SL  R  L+RS S
Sbjct: 208 TCDGVDTCVRRCSSCSSLGQRTGLERSLS 236


>ref|XP_002523741.1| zinc finger protein, putative [Ricinus communis]
           gi|223537045|gb|EEF38681.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 254

 Score =  132 bits (333), Expect = 8e-29
 Identities = 70/147 (47%), Positives = 88/147 (59%), Gaps = 11/147 (7%)
 Frame = +1

Query: 253 AVRRPFNPTTPFDSSMALTILVLLTALFFLGFFSVYIRRFXXXXXXXXXXXXXXXXSK-- 426
           +V +P  P  PFDSSMALT+LVLL+ALFF+GFFS+YIRRF                +   
Sbjct: 35  SVLKPPYPNPPFDSSMALTVLVLLSALFFMGFFSIYIRRFSTEPASEFTSHHPGPGTPSN 94

Query: 427 -------GGA--GLDASAVDSLPLVSYGRTSKHPMIDDCPICLSEFHEKETVKLIPYCGH 579
                  GG+  GLD   + SLP+ SY        I+ C +CL EF EKETVK IPYC H
Sbjct: 95  QRPSRVVGGSRKGLDPEVIKSLPVYSYYHGEAKYQIE-CAVCLGEFEEKETVKSIPYCKH 153

Query: 580 VFHPGCLDTWLASHVTCPLCRSTELFK 660
           +FH  C++TWL  HVTCP+CR T+  +
Sbjct: 154 MFHLECIETWLKLHVTCPVCRGTQFLE 180


>ref|XP_003578264.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Brachypodium
           distachyon]
          Length = 399

 Score =  119 bits (298), Expect = 1e-24
 Identities = 68/176 (38%), Positives = 95/176 (53%), Gaps = 9/176 (5%)
 Frame = +1

Query: 211 AIPEASLSPNSVAAAVRRPFNP--TTPFDSSMALTILVLLTALFFLGFFSVYIRRFXXXX 384
           A+  A L+     ++   P +P   T F  SMA+ I+VL+ A FFLGFFSVYIR      
Sbjct: 20  ALAAADLAAAQQKSSPPLPGDPRYATQFSPSMAIVIVVLIAAFFFLGFFSVYIRHCYGDR 79

Query: 385 XXXXXXXXXXXXS----KGGAGLDASAVDSLPLVSYGRTSKHPMID---DCPICLSEFHE 543
                       +    +   GLD + +++ P ++Y    +H  +    +C +CLSEF +
Sbjct: 80  SGYSVNPLPAGNAARSRRQQRGLDKAVLETFPTMAYADVKEHKSVKGALECAVCLSEFDD 139

Query: 544 KETVKLIPYCGHVFHPGCLDTWLASHVTCPLCRSTELFKKEVCLDVAPDTKDIPAP 711
            ET++L+P C HVFHP C+DTWLASHVTCP+CR+         LDV PD     AP
Sbjct: 140 DETLRLLPKCSHVFHPDCIDTWLASHVTCPVCRAV--------LDV-PDDDPAAAP 186


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