BLASTX nr result

ID: Scutellaria23_contig00003016 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00003016
         (937 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P36688.1|RK12_NICSY RecName: Full=50S ribosomal protein L12, ...   142   1e-31
sp|P24929.1|RK12_TOBAC RecName: Full=50S ribosomal protein L12, ...   142   1e-31
emb|CAA44226.1| ribosomal protein L12-1a [Nicotiana tabacum]          142   1e-31
gb|ABF06704.1| Joka20 [Nicotiana plumbaginifolia]                     142   1e-31
ref|XP_002875404.1| ribosomal protein L12-A [Arabidopsis lyrata ...   115   2e-23

>sp|P36688.1|RK12_NICSY RecName: Full=50S ribosomal protein L12, chloroplastic; AltName:
           Full=CL12; Flags: Precursor gi|248303|gb|AAB21989.1|
           ribosomal protein L12 [Nicotiana sylvestris]
          Length = 186

 Score =  142 bits (358), Expect = 1e-31
 Identities = 82/131 (62%), Positives = 94/131 (71%), Gaps = 2/131 (1%)
 Frame = +3

Query: 126 PKQSVEFPLKATSTFLRRRASAVRPLAAVDAPEKVVDLGDQISNLTLADAQKLVEYLQDK 305
           PK+++EFP++ T     RRA+ +RPLAAV+APEKVV LGD+ISNLTLADAQKLVEYLQDK
Sbjct: 28  PKKTLEFPIR-TPKLQNRRATFLRPLAAVEAPEKVVQLGDEISNLTLADAQKLVEYLQDK 86

Query: 306 LG--XXXXXXXXXXXXXXXXXXXXXXXXXKTEFDVVIDDVPSSSRIATIKVVRALTSLPL 479
           LG                           KTEFDVVID+VPS++RIATIK VRALTSL L
Sbjct: 87  LGVTAASFAPAAVVAAPGAAAEAPAVVEEKTEFDVVIDEVPSNARIATIKAVRALTSLAL 146

Query: 480 KEAKELIEGLP 512
           KEAKELIEGLP
Sbjct: 147 KEAKELIEGLP 157


>sp|P24929.1|RK12_TOBAC RecName: Full=50S ribosomal protein L12, chloroplastic; AltName:
           Full=CL12; Flags: Precursor gi|20018|emb|CAA44214.1|
           ribosomal protein L12-1 [Nicotiana tabacum]
          Length = 186

 Score =  142 bits (357), Expect = 1e-31
 Identities = 82/131 (62%), Positives = 94/131 (71%), Gaps = 2/131 (1%)
 Frame = +3

Query: 126 PKQSVEFPLKATSTFLRRRASAVRPLAAVDAPEKVVDLGDQISNLTLADAQKLVEYLQDK 305
           PK+++EFP++ T     RRA+ +RPLAAV+APEKVV LGD+ISNLTLADAQKLVEYLQDK
Sbjct: 28  PKKALEFPIR-TPKLHHRRATFLRPLAAVEAPEKVVQLGDEISNLTLADAQKLVEYLQDK 86

Query: 306 LG--XXXXXXXXXXXXXXXXXXXXXXXXXKTEFDVVIDDVPSSSRIATIKVVRALTSLPL 479
           LG                           KTEFDVVID+VPS++RIATIK VRALTSL L
Sbjct: 87  LGVTAASFAPAAVAAAPGAAAEAPAVVEEKTEFDVVIDEVPSNARIATIKAVRALTSLAL 146

Query: 480 KEAKELIEGLP 512
           KEAKELIEGLP
Sbjct: 147 KEAKELIEGLP 157


>emb|CAA44226.1| ribosomal protein L12-1a [Nicotiana tabacum]
          Length = 191

 Score =  142 bits (357), Expect = 1e-31
 Identities = 82/131 (62%), Positives = 94/131 (71%), Gaps = 2/131 (1%)
 Frame = +3

Query: 126 PKQSVEFPLKATSTFLRRRASAVRPLAAVDAPEKVVDLGDQISNLTLADAQKLVEYLQDK 305
           PK+++EFP++ T     RRA+ +RPLAAV+APEKVV LGD+ISNLTLADAQKLVEYLQDK
Sbjct: 28  PKKALEFPIR-TPKLHHRRATFLRPLAAVEAPEKVVQLGDEISNLTLADAQKLVEYLQDK 86

Query: 306 LG--XXXXXXXXXXXXXXXXXXXXXXXXXKTEFDVVIDDVPSSSRIATIKVVRALTSLPL 479
           LG                           KTEFDVVID+VPS++RIATIK VRALTSL L
Sbjct: 87  LGVTAASFAPAAVAAAPGAAAEAPAVVEEKTEFDVVIDEVPSNARIATIKAVRALTSLAL 146

Query: 480 KEAKELIEGLP 512
           KEAKELIEGLP
Sbjct: 147 KEAKELIEGLP 157


>gb|ABF06704.1| Joka20 [Nicotiana plumbaginifolia]
          Length = 161

 Score =  142 bits (357), Expect = 1e-31
 Identities = 82/131 (62%), Positives = 94/131 (71%), Gaps = 2/131 (1%)
 Frame = +3

Query: 126 PKQSVEFPLKATSTFLRRRASAVRPLAAVDAPEKVVDLGDQISNLTLADAQKLVEYLQDK 305
           PK+++EFP++ T     RRA+ +RPLAAV+APEKVV LGD+ISNLTLADAQKLVEYLQDK
Sbjct: 28  PKKTLEFPIR-TPKLHHRRATFLRPLAAVEAPEKVVQLGDEISNLTLADAQKLVEYLQDK 86

Query: 306 LG--XXXXXXXXXXXXXXXXXXXXXXXXXKTEFDVVIDDVPSSSRIATIKVVRALTSLPL 479
           LG                           KTEFDVVID+VPS++RIATIK VRALTSL L
Sbjct: 87  LGVTAASFAPAAVVAAPGAAAEAPGVVEEKTEFDVVIDEVPSNARIATIKAVRALTSLAL 146

Query: 480 KEAKELIEGLP 512
           KEAKELIEGLP
Sbjct: 147 KEAKELIEGLP 157


>ref|XP_002875404.1| ribosomal protein L12-A [Arabidopsis lyrata subsp. lyrata]
           gi|297321242|gb|EFH51663.1| ribosomal protein L12-A
           [Arabidopsis lyrata subsp. lyrata]
          Length = 184

 Score =  115 bits (287), Expect = 2e-23
 Identities = 68/131 (51%), Positives = 87/131 (66%), Gaps = 5/131 (3%)
 Frame = +3

Query: 135 SVEFPLK---ATSTFLRRRASAVRPLAAVDAPEKVVDLGDQISNLTLADAQKLVEYLQDK 305
           ++EFP +   A+S+ L  RA+ +RP+AAV+APEK+  +G +IS+LTL +A+ LV+YLQDK
Sbjct: 32  TIEFPSRFGGASSSTLTHRATHLRPIAAVEAPEKIEKIGSEISSLTLEEARILVDYLQDK 91

Query: 306 LGXXXXXXXXXXXXXXXXXXXXXXXXXK--TEFDVVIDDVPSSSRIATIKVVRALTSLPL 479
            G                         +  TEFDVVI++VPSSSRIA IK VRALTSL L
Sbjct: 92  FGVSPLSLAPAAAAVAAPADGGAAAVVEEQTEFDVVINEVPSSSRIAVIKAVRALTSLAL 151

Query: 480 KEAKELIEGLP 512
           KEAKELIEGLP
Sbjct: 152 KEAKELIEGLP 162


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