BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00000952
         (4964 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAG31377.1| topoisomerase I [Catharanthus roseus]                1087   0.0  
dbj|BAK32962.1| topoisomerase I [Ophiorrhiza trichocarpon var. g...  1058   0.0  
dbj|BAK32958.1| topoisomerase I [Ophiorrhiza pedunculata]            1056   0.0  
dbj|BAG31375.1| topoisomerase I [Ophiorrhiza japonica]               1055   0.0  
dbj|BAG31374.1| topoisomerase I [Ophiorrhiza liukiuensis]            1038   0.0  

>dbj|BAG31377.1| topoisomerase I [Catharanthus roseus]
          Length = 910

 Score = 1087 bits (2812), Expect = 0.0
 Identities = 577/915 (63%), Positives = 662/915 (72%), Gaps = 29/915 (3%)
 Frame = +3

Query: 399  MAIEKFDEQKVMDDMDEDDEPLVFKRSSSSAKQNQSNTETKRSLSQKHDQQLGRPGPDIR 578
            MA+E      + DDMDEDDEP+VFKR++S++KQ+Q+N+ET++  SQK D Q  R   D R
Sbjct: 1    MAVEACPTPNLRDDMDEDDEPIVFKRNNSASKQSQTNSETRKVSSQKRDGQSVRQIYDSR 60

Query: 579  PRNGQNTMVEKSKMVPSSR---------TPP-----VKXXXXXXXXXXXXAKGLAVKPSM 716
            P NG+++  +K +MVP S+         +PP     VK            AK   V    
Sbjct: 61   PANGESSSGQKGRMVPPSKPSQVKSPLSSPPSKPSQVKSPLSSPKVSTSSAKKSPVSSLP 120

Query: 717  VNSKPSTSTSDA-----SHFVKRKIKGEK--PLAEATGEPNXXXXXXXXXKPLSVRFSAG 875
             NSKPSTS S        H     IK EK  PL  A+   N         KPLS+R SA 
Sbjct: 121  ANSKPSTSGSFKVKPFNQHKSATVIKEEKSSPLRLASAIINDSEDSDDG-KPLSLRHSAS 179

Query: 876  KVNSNHDKKGANAATFGKHPKXXXXXXXXXXXXKFSVKSNAGDSANRSSNSGERKPPLAK 1055
                N ++        G  P+            +F +KS  G+S +++ +S + KP   K
Sbjct: 180  SSKGNTNQVSKE----GSKPENEDSDDEKPLSSRFPLKSGVGESTSKAYDSDDDKPLAKK 235

Query: 1056 YGQNGSASTERKP---SPILKKRPADSVKSADESYLKRQKLSDTSILSKNKESSVKAEMK 1226
               NGSA  + +P   S +  KRP   +KS+++  +K+ KLS  +  +  K++SVK E K
Sbjct: 236  LQHNGSAMRDGQPNKYSNMSNKRPPGDIKSSNQLSVKKPKLSSVTAPTNKKQASVKPEPK 295

Query: 1227 -EEDDEDHVPISQRMKKP--LDKKPAAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1397
             E+DD+DH+PISQR+KK    + K +++                                
Sbjct: 296  AEDDDDDHLPISQRIKKSPTSESKSSSIKKTTKVVSSSVKKVNKKSKKVMKNSKYSKSSK 355

Query: 1398 XLPSSGEGQKWTTLVHNGVIFPPPYKPHGVRMLYKGKPIDLTPEQEEVATMFAVMLDTDY 1577
              PSSGEG+KW  L HNGVIFPPPYKPHG++MLYKGKP+DLTPEQEEVATMFAVMLDTDY
Sbjct: 356  VPPSSGEGKKWNKLEHNGVIFPPPYKPHGIKMLYKGKPVDLTPEQEEVATMFAVMLDTDY 415

Query: 1578 MNKSQFKENFMSDWRKILGKNHIVQSLEHCDFTPIYEWHXXXXXXXXXMTSXXXXXXXXX 1757
            MNK +FKENF  DW+KILGKNH++Q+LE+CDF+PIYEWH         MT+         
Sbjct: 416  MNKPRFKENFFGDWKKILGKNHVIQNLENCDFSPIYEWHQSEKEKKKQMTTEEKKALKEE 475

Query: 1758 XXXXXXXYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDITINIGKDA 1937
                   YMWA VDG KEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRP DITINIGKDA
Sbjct: 476  KLKQEEKYMWAWVDGKKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPCDITINIGKDA 535

Query: 1938 PIPECPIPGQSWKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSALKGQSDKEKYEKAR 2117
            PIPECP+PG+ WKE+RHDNTVTWLA+WNDPINPKEFKYVFLAASS LKG SDKEKYEKAR
Sbjct: 536  PIPECPVPGERWKEVRHDNTVTWLAFWNDPINPKEFKYVFLAASSTLKGLSDKEKYEKAR 595

Query: 2118 LLKDYIQGIRTAYTKDFSSKDPTKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKV 2297
            LLKDYIQGIR AYTKDF+SKDPTKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKV
Sbjct: 596  LLKDYIQGIRAAYTKDFASKDPTKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKV 655

Query: 2298 ENVEPVPPNILKFDFLGKDSIRYQNEVEVEIPVFKAIQQFRSXXXXXXXXXXXXXTSKLN 2477
            ENVEPVPPNILKFDFLGKDSIRYQNEVEVE  VFKAIQQFRS             TSKLN
Sbjct: 656  ENVEPVPPNILKFDFLGKDSIRYQNEVEVEAAVFKAIQQFRSGKEGSSDLFDLLDTSKLN 715

Query: 2478 AHLKELMPGLTAKVFRTYNASITLDEMLSRETKGGDVAEKIVIYQHANKEVAIICNHQRT 2657
            AHLKELMPGLTAKVFRTYNASITLD+MLSRETKGGDVAEK+V+YQHANKEVAIICNHQRT
Sbjct: 716  AHLKELMPGLTAKVFRTYNASITLDDMLSRETKGGDVAEKVVVYQHANKEVAIICNHQRT 775

Query: 2658 VSKSHSAQMLRLDEKIDELKAVMEELKTDLARAKKGKPLLKS--ADGKPKRNMNPDAIEK 2831
            VSKSHSAQMLRL+EKI+ELKAV+EELK+DL+R KKGKP LKS  ADGKPKRN+NP+++EK
Sbjct: 776  VSKSHSAQMLRLNEKIEELKAVVEELKSDLSRVKKGKPPLKSKNADGKPKRNLNPESLEK 835

Query: 2832 KMAQTTVKIEKMERDKETKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKIFNRSLL 3011
            K+AQT  KIEKMERDKETKEDLKTVALGTSKINYLDPRI+VAWCKRHEVPIEKIFN+SLL
Sbjct: 836  KIAQTNAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLL 895

Query: 3012 AKFAWAMDVDPSFRF 3056
            AKF WAMDVDPSFRF
Sbjct: 896  AKFTWAMDVDPSFRF 910


>dbj|BAK32962.1| topoisomerase I [Ophiorrhiza trichocarpon var. glabra]
          Length = 920

 Score = 1058 bits (2735), Expect = 0.0
 Identities = 560/920 (60%), Positives = 646/920 (70%), Gaps = 41/920 (4%)
 Frame = +3

Query: 399  MAIEKFDEQKVMDDMDEDDEPLVFKRSSSSAKQNQSNTETKRSLSQKHDQQLGRPGPDIR 578
            MA+E      +M+DM++D+ P++FKRS+ ++KQNQ+N+E K+   Q+H  Q      D+R
Sbjct: 1    MAVEACTTTNLMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQRHVGQSAVHTSDVR 60

Query: 579  PRNGQNTMVEKSKMVPSSRTPPVKXXXXXXXXXXXXAKGLAVKPSMVNSKPSTSTSDAS- 755
            P NG+N+  +K ++ PS++TPPVK            AK   +  +  NSKPS S +  + 
Sbjct: 61   PANGENSSAQKGRIQPSAKTPPVKSPLSSPKASNSSAKASPITSAGANSKPSASATSTAK 120

Query: 756  ----HFVKRKIKGEKPLAEATGEPNXXXXXXXXXKPLSVRF--SAGKVNSNHDKKGANAA 917
                H         KP   A  + N         KPLS R    + K  SNH  K    +
Sbjct: 121  QQNHHKSSAAFIEPKPSVPAA-KANSNSESSDDEKPLSARTFGCSSKGKSNHANKEGGDS 179

Query: 918  TFGKHP---KXXXXXXXXXXXXKFSVKSNAGDSANRSSNSGERKPPLAKYGQNGSASTE- 1085
               + P   +            +F+ KS+ G+S ++S +S E+KP  AK   NGSAS + 
Sbjct: 180  CSIRRPVIEESEDSEDEKPLSRRFTSKSSLGESTSKSYDSDEKKPLAAKVQPNGSASRDS 239

Query: 1086 --RKPSPILKKRPADSVKSADESYLKRQKLSDTSILSKNKESSVKAEMKEEDDEDHVPIS 1259
               K + +  KRP   VKS ++S LK+ KLS       NK+++VK E K EDD+D++P+S
Sbjct: 240  PMNKSASLSNKRPPGEVKSLNQSSLKKPKLSSPITSISNKQAAVKPEPKAEDDDDNIPLS 299

Query: 1260 QRMKKP--------------------LDKKPAAVXXXXXXXXXXXXXXXXXXXXXXXXXX 1379
            QR KK                     + K PA+V                          
Sbjct: 300  QRGKKSQTATSKPKDEDDDNVPISQRIKKSPASVSKSSAPVKKASTVVSPSLKKVNKKSK 359

Query: 1380 XXXXXXXL-------PSSGEGQKWTTLVHNGVIFPPPYKPHGVRMLYKGKPIDLTPEQEE 1538
                           P SGEGQKWTTLVHNGVIFPPPYKPHGV+MLYK +PI LTPEQEE
Sbjct: 360  KVIKKTAYTKSSKVPPGSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKRQPITLTPEQEE 419

Query: 1539 VATMFAVMLDTDYMNKSQFKENFMSDWRKILGKNHIVQSLEHCDFTPIYEWHXXXXXXXX 1718
            VATMFAVMLDTDYMNK +FKENF SDW+K+LGKNH +Q+LE CDF PIYEWH        
Sbjct: 420  VATMFAVMLDTDYMNKPRFKENFFSDWKKMLGKNHTIQNLEDCDFGPIYEWHQQEKEKKK 479

Query: 1719 XMTSXXXXXXXXXXXXXXXXYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRI 1898
             MT+                YMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRI
Sbjct: 480  QMTTEEKKALKEEKLQQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRI 539

Query: 1899 RPSDITINIGKDAPIPECPIPGQSWKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSAL 2078
            RP DITINIGKDAPIPECPIPG+ WKE+R+DNTVTWLAYWNDPIN KEFKYVFLAASS L
Sbjct: 540  RPRDITINIGKDAPIPECPIPGERWKEVRNDNTVTWLAYWNDPINQKEFKYVFLAASSTL 599

Query: 2079 KGQSDKEKYEKARLLKDYIQGIRTAYTKDFSS-KDPTKKQIAVATYLIDKLALRAGNEKD 2255
            KGQSDKEKYEKARLLKDYI GIR AYTKDF++ KDP KKQIAVATYLIDKLALRAGNEKD
Sbjct: 600  KGQSDKEKYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEKD 659

Query: 2256 DDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVEIPVFKAIQQFRSXXXX 2435
            DDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEV+VE  VFKAIQQFRS    
Sbjct: 660  DDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVQVEPAVFKAIQQFRSGKEG 719

Query: 2436 XXXXXXXXXTSKLNAHLKELMPGLTAKVFRTYNASITLDEMLSRETKGGDVAEKIVIYQH 2615
                     TSKLNAHLKELMPGLTAKVFRTYNASITLD+MLS++T GG+VAEK+V+YQH
Sbjct: 720  SEDLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSKKTNGGEVAEKVVVYQH 779

Query: 2616 ANKEVAIICNHQRTVSKSHSAQMLRLDEKIDELKAVMEELKTDLARAKKGKPLLKSADGK 2795
            ANKEVAIICNHQRTVSKSHSAQM RL+EKIDELK  +EELKTDL+RAKKGKPL K ADGK
Sbjct: 780  ANKEVAIICNHQRTVSKSHSAQMSRLNEKIDELKTALEELKTDLSRAKKGKPLSKGADGK 839

Query: 2796 PKRNMNPDAIEKKMAQTTVKIEKMERDKETKEDLKTVALGTSKINYLDPRISVAWCKRHE 2975
            PKRN+NP+A+E+K+AQT  KIEKMERDKETKEDLKTVALGTSKINYLDPRI+VAWCKRHE
Sbjct: 840  PKRNLNPEALERKIAQTNAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHE 899

Query: 2976 VPIEKIFNRSLLAKFAWAMD 3035
            VPIEKIFN+SLLAKFAWAM+
Sbjct: 900  VPIEKIFNKSLLAKFAWAMN 919


>dbj|BAK32958.1| topoisomerase I [Ophiorrhiza pedunculata]
          Length = 920

 Score = 1056 bits (2731), Expect = 0.0
 Identities = 560/920 (60%), Positives = 644/920 (70%), Gaps = 41/920 (4%)
 Frame = +3

Query: 399  MAIEKFDEQKVMDDMDEDDEPLVFKRSSSSAKQNQSNTETKRSLSQKHDQQLGRPGPDIR 578
            MA+E      +M+DM++D+ P++FKRS+ ++KQNQ+N+E K+   QKH  Q      D+R
Sbjct: 1    MAVEACTTTNLMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQKHVGQSAVHTSDVR 60

Query: 579  PRNGQNTMVEKSKMVPSSRTPPVKXXXXXXXXXXXXAKGLAVKPSMVNSKPSTSTSDAS- 755
            P NG+N+  +K ++ PS++TPPVK            AK   +     NSKPS S +  + 
Sbjct: 61   PANGENSSAQKGRIQPSAKTPPVKSPLSSPKASNSSAKASPITSPGANSKPSASATSTAK 120

Query: 756  ----HFVKRKIKGEKPLAEATGEPNXXXXXXXXXKPLSVRF--SAGKVNSNHDKKGANAA 917
                H         KP   A  + N         KPLS R    + K  SNH  K    +
Sbjct: 121  QQNHHKSSAAFIEPKPSVPAA-KANSNSESSDDEKPLSARTFGCSSKGKSNHANKEGGDS 179

Query: 918  TFGKHP---KXXXXXXXXXXXXKFSVKSNAGDSANRSSNSGERKPPLAKYGQNGSASTE- 1085
               + P   +            +F+ KS+ G+S ++S +S E+KP  AK   NGSAS + 
Sbjct: 180  CSIRRPVIEESEDSEDEKPLSRRFTSKSSLGESTSKSYDSDEKKPLAAKVQPNGSASRDS 239

Query: 1086 --RKPSPILKKRPADSVKSADESYLKRQKLSDTSILSKNKESSVKAEMKEEDDEDHVPIS 1259
               K + +  KRP   VKS ++S LK+ KLS       NK+++VK E K EDD+D++P+S
Sbjct: 240  PMNKSASLSNKRPPGEVKSLNQSSLKKPKLSSPITSISNKQAAVKPEPKAEDDDDNIPLS 299

Query: 1260 QRMKKP--------------------LDKKPAAVXXXXXXXXXXXXXXXXXXXXXXXXXX 1379
            QR KK                     + K PA+V                          
Sbjct: 300  QRGKKSQTATSKPKDEDDDNVPISQRIKKSPASVSKSSAPVKKASTVVSPSLKKVNKKSK 359

Query: 1380 XXXXXXXL-------PSSGEGQKWTTLVHNGVIFPPPYKPHGVRMLYKGKPIDLTPEQEE 1538
                           P SGEGQKWTTLVHNGVIFPPPYKPHGV+MLYK +PI LTPEQEE
Sbjct: 360  KVIKKTAYTKSSKVPPGSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKRQPITLTPEQEE 419

Query: 1539 VATMFAVMLDTDYMNKSQFKENFMSDWRKILGKNHIVQSLEHCDFTPIYEWHXXXXXXXX 1718
            VATMFAVMLDTDYMNK +FKENF SDW+K+LGKNH +Q+LE CDF PIYEWH        
Sbjct: 420  VATMFAVMLDTDYMNKPRFKENFFSDWKKMLGKNHTIQNLEDCDFGPIYEWHQQEKEKKK 479

Query: 1719 XMTSXXXXXXXXXXXXXXXXYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRI 1898
             MT+                YMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRI
Sbjct: 480  QMTTEEKKALKEEKLQQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRI 539

Query: 1899 RPSDITINIGKDAPIPECPIPGQSWKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSAL 2078
            RP DITINIGKDAPIPECPIPG+ WKE+R+DNTVTWLAYWNDPIN KEFKYVFLAASS L
Sbjct: 540  RPRDITINIGKDAPIPECPIPGERWKEVRNDNTVTWLAYWNDPINQKEFKYVFLAASSTL 599

Query: 2079 KGQSDKEKYEKARLLKDYIQGIRTAYTKDFSS-KDPTKKQIAVATYLIDKLALRAGNEKD 2255
            KGQSDKEKYEKARLLKDYI GIR AYTKDF++ KDP KKQIAVATYLIDKLALRAGNEKD
Sbjct: 600  KGQSDKEKYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEKD 659

Query: 2256 DDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVEIPVFKAIQQFRSXXXX 2435
            DDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEV+VE  VFKAI QFRS    
Sbjct: 660  DDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVQVEPAVFKAIHQFRSGKEG 719

Query: 2436 XXXXXXXXXTSKLNAHLKELMPGLTAKVFRTYNASITLDEMLSRETKGGDVAEKIVIYQH 2615
                     TSKLNAHLKELMPGLTAKVFRTYNASITLD+MLS++T GG+VAEK+V+YQH
Sbjct: 720  SEDLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSKKTNGGEVAEKVVVYQH 779

Query: 2616 ANKEVAIICNHQRTVSKSHSAQMLRLDEKIDELKAVMEELKTDLARAKKGKPLLKSADGK 2795
            ANKEVAIICNHQRTVSKSHSAQM RL+EKIDELK  +EELKTDL+RAKKGKPL K ADGK
Sbjct: 780  ANKEVAIICNHQRTVSKSHSAQMSRLNEKIDELKTALEELKTDLSRAKKGKPLSKGADGK 839

Query: 2796 PKRNMNPDAIEKKMAQTTVKIEKMERDKETKEDLKTVALGTSKINYLDPRISVAWCKRHE 2975
            PKRN+NP+A+E+K+AQT  KIEKMERDKETKEDLKTVALGTSKINYLDPRI+VAWCKRHE
Sbjct: 840  PKRNLNPEALERKIAQTNAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHE 899

Query: 2976 VPIEKIFNRSLLAKFAWAMD 3035
            VPIEKIFN+SLLAKFAWAM+
Sbjct: 900  VPIEKIFNKSLLAKFAWAMN 919


>dbj|BAG31375.1| topoisomerase I [Ophiorrhiza japonica]
          Length = 927

 Score = 1055 bits (2729), Expect = 0.0
 Identities = 561/919 (61%), Positives = 648/919 (70%), Gaps = 43/919 (4%)
 Frame = +3

Query: 429  VMDDMDEDDEPLVFKRSSSSAKQNQSNTETKRSLSQKHDQQLGRPGPDIRPRNGQNTMVE 608
            +M+DM++D+ P++FKRS+ ++KQNQ+N+E K+   QKH  Q      D+RP NG+++  +
Sbjct: 10   LMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQKHVGQSAVHTSDVRPANGESSSAQ 69

Query: 609  KSKMVPSSRTPPVKXXXXXXXXXXXXAKGLAVKPSMVNSKPSTSTSDAS-----HFVKRK 773
            K ++ PS++TPPVK            AK   +     NSKPS S +  +     H     
Sbjct: 70   KGRIQPSAKTPPVKSPLSSPKASNSSAKASPITSPGANSKPSASATSTAKQQNHHKSSAA 129

Query: 774  IKGEKPLAEATGEPNXXXXXXXXXKPLSVRF--SAGKVNSNH-DKKGANAATFGKH--PK 938
                KP   A  + N         KPLS R    + K  SNH +K+G ++ +  +    +
Sbjct: 130  FIEPKPSVPAA-KANSNSESSDDEKPLSARTFGCSSKGKSNHANKEGGDSCSIRRRVIEE 188

Query: 939  XXXXXXXXXXXXKFSVKSNAGDSANRSSNSGERKPPLAKYGQNGSASTE---RKPSPILK 1109
                        +F+ KS+ G+S ++S +S E+KP  AK  QNGS S +    K + +  
Sbjct: 189  SEDSEDEKPLSRRFTSKSSLGESTSKSYDSDEKKPLAAKVQQNGSVSRDGPMNKSASLSN 248

Query: 1110 KRPADSVKSADESYLKRQKLSDTSILSKNKESSVKAEM--KEEDDEDHVPISQRMKKP-- 1277
            KRP   VKS ++S +K+ KLS       NK+++VK E   K EDD+D++P+SQR KK   
Sbjct: 249  KRPPGEVKSLNQSSVKKPKLSSPITSISNKQAAVKPEPEPKAEDDDDNIPLSQRGKKSQA 308

Query: 1278 ------------------LDKKPAAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL 1403
                              + K PA+V                                  
Sbjct: 309  ATSKPKDEDDDNVPIAQRIKKSPASVSKSSAPVKKASTVVSPSLKKVNKNSKKVIKKTAY 368

Query: 1404 -------PSSGEGQKWTTLVHNGVIFPPPYKPHGVRMLYKGKPIDLTPEQEEVATMFAVM 1562
                   P SGEGQKWTTLVHNGVIFPPPY PHGV+MLYK +PI LTPEQEEVATMFAVM
Sbjct: 369  TKSSKVPPGSGEGQKWTTLVHNGVIFPPPYNPHGVKMLYKRQPITLTPEQEEVATMFAVM 428

Query: 1563 LDTDYMNKSQFKENFMSDWRKILGKNHIVQSLEHCDFTPIYEWHXXXXXXXXXMTSXXXX 1742
            LDTDYMNK +FKENF SDW+K+LGKNH +Q+LE CDF PIYEWH         MT+    
Sbjct: 429  LDTDYMNKPRFKENFFSDWKKMLGKNHTIQNLEDCDFGPIYEWHQQEKEKKKQMTTEEKK 488

Query: 1743 XXXXXXXXXXXXYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDITIN 1922
                        YMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRP DITIN
Sbjct: 489  ALKEDKLQQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPRDITIN 548

Query: 1923 IGKDAPIPECPIPGQSWKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSALKGQSDKEK 2102
            IGKDAPIPECPIPG+ WKE+R+DNTVTWLA+W DPIN KEFKYVFLAASS LKGQSDKEK
Sbjct: 549  IGKDAPIPECPIPGERWKEVRNDNTVTWLAFWIDPINQKEFKYVFLAASSTLKGQSDKEK 608

Query: 2103 YEKARLLKDYIQGIRTAYTKDFSS-KDPTKKQIAVATYLIDKLALRAGNEKDDDEADTVG 2279
            YEKARLLKDYI GIR AYTKDF++ KDP KKQIAVATYLIDKLALRAGNEKDDDEADTVG
Sbjct: 609  YEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEKDDDEADTVG 668

Query: 2280 CCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVEIPVFKAIQQFRSXXXXXXXXXXXX 2459
            CCTLKVENVEPVPPNILKFDFLGKDSIRYQNEV+VE  VFKAIQQFRS            
Sbjct: 669  CCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVQVEPAVFKAIQQFRSGKEGSEDLFDRL 728

Query: 2460 XTSKLNAHLKELMPGLTAKVFRTYNASITLDEMLSRETKGGDVAEKIVIYQHANKEVAII 2639
             TSKLNAHLKELMPGLTAKVFRTYNASITLD+MLS+ETKGG+VAEK+V+YQHANKEVAII
Sbjct: 729  DTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSKETKGGEVAEKVVVYQHANKEVAII 788

Query: 2640 CNHQRTVSKSHSAQMLRLDEKIDELKAVMEELKTDLARAKKGKPLLKSADGKPKRNMNPD 2819
            CNHQRTVSKSHSAQM RL+EKIDELK  MEELKTDL+R KKGKP  K ADGKPKRN+NP+
Sbjct: 789  CNHQRTVSKSHSAQMSRLNEKIDELKTAMEELKTDLSRVKKGKPPSKGADGKPKRNLNPE 848

Query: 2820 AIEKKMAQTTVKIEKMERDKETKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKIFN 2999
            A+E+KMAQ   KIEKMERDKETKEDLKTVALGTSKINYLDPRI+VAWCKRHEVPIEKIFN
Sbjct: 849  ALERKMAQINAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFN 908

Query: 3000 RSLLAKFAWAMDVDPSFRF 3056
            +SLLAKFAW+MDVDPSFRF
Sbjct: 909  KSLLAKFAWSMDVDPSFRF 927


>dbj|BAG31374.1| topoisomerase I [Ophiorrhiza liukiuensis]
          Length = 926

 Score = 1038 bits (2683), Expect = 0.0
 Identities = 553/927 (59%), Positives = 641/927 (69%), Gaps = 41/927 (4%)
 Frame = +3

Query: 399  MAIEKFDEQKVMDDMDEDDEPLVFKRSSSSAKQNQSNTETKRSLSQKHDQQLGRPGPDIR 578
            MA+E      +M+DM++D+ P++FKRS+ ++KQNQ+N+E K+   QKH  Q      D+R
Sbjct: 1    MAVEACTTPNLMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQKHVGQSAVHTSDVR 60

Query: 579  PRNGQNTMVEKSKMVPSSRTPPVKXXXXXXXXXXXXAKGLAVKPSMVNSKPSTSTSDAS- 755
            P NG+++  +K ++ PS+ TPPVK            AK   +     NSK S S +  + 
Sbjct: 61   PANGESSSAQKGRIQPSAETPPVKSPLSSPKASNSSAKASPITSPGANSKLSASATSTAK 120

Query: 756  ----HFVKRKIKGEKPLAEATGEPNXXXXXXXXXKPLSVRFS--AGKVNSNHDKKGANAA 917
                H         KP   A  + N         KPL  R S  + K  SNH  K    +
Sbjct: 121  QQNHHKSSAAFIEPKPSVPAA-KANSNSESSDDEKPLIARTSGCSSKGKSNHANKEGGDS 179

Query: 918  TFGKHP---KXXXXXXXXXXXXKFSVKSNAGDSANRSSNSGERKPPLAKYGQNGSASTE- 1085
               + P   +            +F  KS+ G+S ++S +S E+KP   K  QNGSAS + 
Sbjct: 180  CSIRRPVIEESEDSEDEKPLSRRFPSKSSLGESTSKSYDSDEKKPLATKVQQNGSASRDG 239

Query: 1086 --RKPSPILKKRPADSVKSADESYLKRQKLSDTSILSKNKESSVKAEMKEEDDEDHVPIS 1259
               K + +L KR    VKS ++S LK+ KLS       NK+++VK E K EDD+D++P+S
Sbjct: 240  PMNKSASLLNKRAPGEVKSLNQSSLKKAKLSSPITSISNKQAAVKPEPKAEDDDDNIPLS 299

Query: 1260 QRMKKP--------------------LDKKPAAVXXXXXXXXXXXXXXXXXXXXXXXXXX 1379
            QR KK                     + K PA+V                          
Sbjct: 300  QRGKKSQTAASKPKDEDDDNAPISQRIKKSPASVSKSSAPVKKASTVVSPSLKKVNKKSK 359

Query: 1380 XXXXXXXL-------PSSGEGQKWTTLVHNGVIFPPPYKPHGVRMLYKGKPIDLTPEQEE 1538
                           P SGEGQKWTTLVHNGV+F PPYKPHGV+MLYK +P+ LTPEQEE
Sbjct: 360  KVIKKTAYTKSSKVPPGSGEGQKWTTLVHNGVMFLPPYKPHGVKMLYKXQPLTLTPEQEE 419

Query: 1539 VATMFAVMLDTDYMNKSQFKENFMSDWRKILGKNHIVQSLEHCDFTPIYEWHXXXXXXXX 1718
            VATMFAVMLDTDYM K +FKENF SDW+K+LGKNH VQ+LE CDF PIYEWH        
Sbjct: 420  VATMFAVMLDTDYMTKPRFKENFFSDWKKMLGKNHTVQNLEDCDFGPIYEWHQQEKEKRK 479

Query: 1719 XMTSXXXXXXXXXXXXXXXXYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRI 1898
             MT+                YMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRI
Sbjct: 480  QMTTEEKKALKEERLQQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRI 539

Query: 1899 RPSDITINIGKDAPIPECPIPGQSWKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSAL 2078
            RP DITINIGKDAPIPECPIPG+ WKE+R+DNTVTWLA+WNDPIN KE KYVFLAASS L
Sbjct: 540  RPRDITINIGKDAPIPECPIPGERWKEVRNDNTVTWLAFWNDPINQKECKYVFLAASSTL 599

Query: 2079 KGQSDKEKYEKARLLKDYIQGIRTAYTKDFSS-KDPTKKQIAVATYLIDKLALRAGNEKD 2255
            KGQSDKEKYEKARLLKDYI GIR AYTKDF++ KDP KKQIAVATYLIDKLALRAGNEKD
Sbjct: 600  KGQSDKEKYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEKD 659

Query: 2256 DDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVEIPVFKAIQQFRSXXXX 2435
            DDEADTVGCCTLKVENVEPVPPNILK DF+GKDSIRYQNEV+VE  VFKAIQQFRS    
Sbjct: 660  DDEADTVGCCTLKVENVEPVPPNILKIDFIGKDSIRYQNEVQVEPAVFKAIQQFRSGKEG 719

Query: 2436 XXXXXXXXXTSKLNAHLKELMPGLTAKVFRTYNASITLDEMLSRETKGGDVAEKIVIYQH 2615
                     TSKLNAHLKELMPGLTAKVFRTYNASITLD+MLS+ETKGG VAEK+ +YQH
Sbjct: 720  CADLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSKETKGGKVAEKVGVYQH 779

Query: 2616 ANKEVAIICNHQRTVSKSHSAQMLRLDEKIDELKAVMEELKTDLARAKKGKPLLKSADGK 2795
            ANKEVAIICNHQRTVSKSHSAQM RL+EKIDELK  +EELKTDL+RAKKGKP  K ADG+
Sbjct: 780  ANKEVAIICNHQRTVSKSHSAQMSRLNEKIDELKTALEELKTDLSRAKKGKPPAKGADGE 839

Query: 2796 PKRNMNPDAIEKKMAQTTVKIEKMERDKETKEDLKTVALGTSKINYLDPRISVAWCKRHE 2975
            PKRN+NP+++E+K+AQT  KIEKMERDK+TKEDLK VAL TSKI+YLDPRI+VAWCKRHE
Sbjct: 840  PKRNLNPESLERKIAQTNAKIEKMERDKKTKEDLKAVALSTSKISYLDPRITVAWCKRHE 899

Query: 2976 VPIEKIFNRSLLAKFAWAMDVDPSFRF 3056
            VPIEKIFN+SLLAKFAW+MDVDPSFRF
Sbjct: 900  VPIEKIFNKSLLAKFAWSMDVDPSFRF 926