BLASTX nr result

ID: Scutellaria23_contig00000877 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00000877
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAN72063.1| t-complex polypeptide 1 homologue [Arabidopsis th...   105   5e-21
ref|NP_188640.1| T-complex protein 1 subunit alpha [Arabidopsis ...   105   5e-21
ref|XP_002885354.1| t-complex protein alpha subunit of chaperoni...   105   5e-21
ref|XP_002276924.2| PREDICTED: T-complex protein 1 subunit alpha...   104   7e-21
ref|XP_003524991.1| PREDICTED: T-complex protein 1 subunit alpha...   103   1e-20

>gb|AAN72063.1| t-complex polypeptide 1 homologue [Arabidopsis thaliana]
          Length = 545

 Score =  105 bits (261), Expect = 5e-21
 Identities = 52/61 (85%), Positives = 57/61 (93%)
 Frame = -3

Query: 426 HLSSMGLDLVKGSVRNNLEAGVIEPAMSKVKIIQFATEAAITILRIDDMIRLVKDEQDGQ 247
           H SSMGLDLV G++RNNLEAGVIEPAMSKVKIIQFATEAAITILRIDDMI+LVKDE  G+
Sbjct: 485 HYSSMGLDLVNGTIRNNLEAGVIEPAMSKVKIIQFATEAAITILRIDDMIKLVKDESQGE 544

Query: 246 D 244
           +
Sbjct: 545 E 545


>ref|NP_188640.1| T-complex protein 1 subunit alpha [Arabidopsis thaliana]
           gi|135535|sp|P28769.1|TCPA_ARATH RecName: Full=T-complex
           protein 1 subunit alpha; Short=TCP-1-alpha; AltName:
           Full=CCT-alpha gi|217871|dbj|BAA01955.1| t-complex
           polypeptide 1 homologue [Arabidopsis thaliana]
           gi|2326265|dbj|BAA21772.1| CCT alpha/TCP-1 [Arabidopsis
           thaliana] gi|59958326|gb|AAX12873.1| At3g20050
           [Arabidopsis thaliana] gi|332642803|gb|AEE76324.1|
           T-complex protein 1 subunit alpha [Arabidopsis thaliana]
          Length = 545

 Score =  105 bits (261), Expect = 5e-21
 Identities = 52/61 (85%), Positives = 57/61 (93%)
 Frame = -3

Query: 426 HLSSMGLDLVKGSVRNNLEAGVIEPAMSKVKIIQFATEAAITILRIDDMIRLVKDEQDGQ 247
           H SSMGLDLV G++RNNLEAGVIEPAMSKVKIIQFATEAAITILRIDDMI+LVKDE  G+
Sbjct: 485 HYSSMGLDLVNGTIRNNLEAGVIEPAMSKVKIIQFATEAAITILRIDDMIKLVKDESQGE 544

Query: 246 D 244
           +
Sbjct: 545 E 545


>ref|XP_002885354.1| t-complex protein alpha subunit of chaperonin [Arabidopsis lyrata
           subsp. lyrata] gi|297331194|gb|EFH61613.1| t-complex
           protein alpha subunit of chaperonin [Arabidopsis lyrata
           subsp. lyrata]
          Length = 545

 Score =  105 bits (261), Expect = 5e-21
 Identities = 52/61 (85%), Positives = 57/61 (93%)
 Frame = -3

Query: 426 HLSSMGLDLVKGSVRNNLEAGVIEPAMSKVKIIQFATEAAITILRIDDMIRLVKDEQDGQ 247
           H SSMGLDLV G++RNNLEAGVIEPAMSKVKIIQFATEAAITILRIDDMI+LVKDE  G+
Sbjct: 485 HYSSMGLDLVNGTIRNNLEAGVIEPAMSKVKIIQFATEAAITILRIDDMIKLVKDESQGE 544

Query: 246 D 244
           +
Sbjct: 545 E 545


>ref|XP_002276924.2| PREDICTED: T-complex protein 1 subunit alpha-like [Vitis vinifera]
           gi|297734570|emb|CBI16621.3| unnamed protein product
           [Vitis vinifera]
          Length = 546

 Score =  104 bits (260), Expect = 7e-21
 Identities = 52/61 (85%), Positives = 58/61 (95%)
 Frame = -3

Query: 426 HLSSMGLDLVKGSVRNNLEAGVIEPAMSKVKIIQFATEAAITILRIDDMIRLVKDEQDGQ 247
           HLSSMGLDL+KG+VRNNLEAGVIEPAMSKVKI+QFATEAAITILRIDDMI+LVKDE   +
Sbjct: 485 HLSSMGLDLLKGTVRNNLEAGVIEPAMSKVKILQFATEAAITILRIDDMIKLVKDETQNE 544

Query: 246 D 244
           +
Sbjct: 545 E 545


>ref|XP_003524991.1| PREDICTED: T-complex protein 1 subunit alpha-like [Glycine max]
          Length = 545

 Score =  103 bits (258), Expect = 1e-20
 Identities = 52/61 (85%), Positives = 56/61 (91%)
 Frame = -3

Query: 426 HLSSMGLDLVKGSVRNNLEAGVIEPAMSKVKIIQFATEAAITILRIDDMIRLVKDEQDGQ 247
           HLSSMGLDL +G +RNNLEAGVIEPAMSKVKIIQFATEAAITILRIDDMI+LVKDE   +
Sbjct: 485 HLSSMGLDLSQGKIRNNLEAGVIEPAMSKVKIIQFATEAAITILRIDDMIKLVKDESQNE 544

Query: 246 D 244
           D
Sbjct: 545 D 545


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