BLASTX nr result

ID: Scutellaria23_contig00000868 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00000868
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF31404.1|AF200323_1 putative glycine-rich RNA-binding prote...    76   3e-12
gb|AAF31402.1| putative glycine-rich RNA binding protein 1 [Cath...    75   4e-12
gb|AAF31403.1|AF200322_1 putative glycine-rich RNA binding prote...    74   1e-11
gb|AAB63581.1| glycine-rich RNA binding protein 1 [Pelargonium x...    73   2e-11
gb|ACH60531.1| glycine-rich RNA-binding protein [Pseudotsuga men...    71   8e-11

>gb|AAF31404.1|AF200323_1 putative glycine-rich RNA-binding protein 2 [Catharanthus roseus]
          Length = 160

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 35/39 (89%), Positives = 38/39 (97%)
 Frame = -1

Query: 189 MAAADVEFRCFVGGLAWATTDQSLEQAFSQYGEVVESKV 73
           MA+ADVEFRCFVGGLAWATTDQSL +AFSQYGEV+ESKV
Sbjct: 1   MASADVEFRCFVGGLAWATTDQSLSEAFSQYGEVLESKV 39


>gb|AAF31402.1| putative glycine-rich RNA binding protein 1 [Catharanthus roseus]
          Length = 137

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 34/39 (87%), Positives = 38/39 (97%)
 Frame = -1

Query: 189 MAAADVEFRCFVGGLAWATTDQSLEQAFSQYGEVVESKV 73
           MA+ADVEFRCFVGGLAWATTDQSL +AFSQYGEV+ESK+
Sbjct: 1   MASADVEFRCFVGGLAWATTDQSLSEAFSQYGEVLESKI 39


>gb|AAF31403.1|AF200322_1 putative glycine-rich RNA binding protein 3 [Catharanthus roseus]
          Length = 164

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 32/39 (82%), Positives = 38/39 (97%)
 Frame = -1

Query: 189 MAAADVEFRCFVGGLAWATTDQSLEQAFSQYGEVVESKV 73
           MA+ADVE+RCFVGGLAWATTDQSL +AFSQYGE++ESK+
Sbjct: 1   MASADVEYRCFVGGLAWATTDQSLSEAFSQYGEILESKI 39


>gb|AAB63581.1| glycine-rich RNA binding protein 1 [Pelargonium x hortorum]
           gi|2267569|gb|AAB63582.1| glycine-rich RNA binding
           protein 2 [Pelargonium x hortorum]
          Length = 166

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 33/39 (84%), Positives = 37/39 (94%)
 Frame = -1

Query: 189 MAAADVEFRCFVGGLAWATTDQSLEQAFSQYGEVVESKV 73
           MA+ADVE+RCFVGGLAWAT D +LEQAFSQYGEVVESK+
Sbjct: 1   MASADVEYRCFVGGLAWATDDHALEQAFSQYGEVVESKI 39


>gb|ACH60531.1| glycine-rich RNA-binding protein [Pseudotsuga menziesii]
          Length = 66

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 32/39 (82%), Positives = 37/39 (94%)
 Frame = -1

Query: 189 MAAADVEFRCFVGGLAWATTDQSLEQAFSQYGEVVESKV 73
           MAAADVEFRCFVGGLAW+T D+SL++AFS YGEVVESK+
Sbjct: 1   MAAADVEFRCFVGGLAWSTDDRSLQEAFSPYGEVVESKI 39


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