BLASTX nr result

ID: Scutellaria23_contig00000854 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00000854
         (685 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF34799.1|AF227979_1 40S ribosomal protein S16 [Euphorbia es...   276   4e-72
ref|XP_002518738.1| ribosomal protein S9, putative [Ricinus comm...   275   5e-72
ref|XP_002285101.1| PREDICTED: 40S ribosomal protein S16 [Vitis ...   275   8e-72
ref|XP_002300225.1| predicted protein [Populus trichocarpa] gi|1...   274   1e-71
gb|ABK20993.1| unknown [Picea sitchensis] gi|116781861|gb|ABK222...   274   1e-71

>gb|AAF34799.1|AF227979_1 40S ribosomal protein S16 [Euphorbia esula]
          Length = 144

 Score =  276 bits (705), Expect = 4e-72
 Identities = 136/143 (95%), Positives = 141/143 (98%)
 Frame = -3

Query: 644 ATATESVQCFGRKKTAVAVTHCKRGRGLIKINGVPIELVQPEILRYKAFEPILLLGRHRF 465
           AT TESVQCFGRKKTAVAVTHCKRGRGLIKING PIELV+PEILR+KA+EPILLLGRHRF
Sbjct: 2   ATPTESVQCFGRKKTAVAVTHCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRF 61

Query: 464 AGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVAD 285
           AGVDMRIRVKGGGHTSQIYAIRQSIAKALVA+YQK+VDEQSKKEIKDILVRYDRTLLVAD
Sbjct: 62  AGVDMRIRVKGGGHTSQIYAIRQSIAKALVAYYQKFVDEQSKKEIKDILVRYDRTLLVAD 121

Query: 284 PRRCEPKKFGGRGARARFQKSYR 216
           PRRCEPKKFGGRGARARFQKSYR
Sbjct: 122 PRRCEPKKFGGRGARARFQKSYR 144


>ref|XP_002518738.1| ribosomal protein S9, putative [Ricinus communis]
           gi|223542119|gb|EEF43663.1| ribosomal protein S9,
           putative [Ricinus communis]
          Length = 151

 Score =  275 bits (704), Expect = 5e-72
 Identities = 136/145 (93%), Positives = 141/145 (97%)
 Frame = -3

Query: 650 TMATATESVQCFGRKKTAVAVTHCKRGRGLIKINGVPIELVQPEILRYKAFEPILLLGRH 471
           T  + TESVQCFGRKKTAVAVTHCKRGRGLIKING PIELV+PEILR+KA+EPILLLGRH
Sbjct: 7   TTPSQTESVQCFGRKKTAVAVTHCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRH 66

Query: 470 RFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLV 291
           RFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVA+YQKYVDEQSKKEIKDILVRYDRTLLV
Sbjct: 67  RFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAYYQKYVDEQSKKEIKDILVRYDRTLLV 126

Query: 290 ADPRRCEPKKFGGRGARARFQKSYR 216
           ADPRRCEPKKFGGRGARARFQKSYR
Sbjct: 127 ADPRRCEPKKFGGRGARARFQKSYR 151


>ref|XP_002285101.1| PREDICTED: 40S ribosomal protein S16 [Vitis vinifera]
           gi|147826473|emb|CAN72805.1| hypothetical protein
           VITISV_035308 [Vitis vinifera]
          Length = 144

 Score =  275 bits (702), Expect = 8e-72
 Identities = 137/144 (95%), Positives = 140/144 (97%)
 Frame = -3

Query: 647 MATATESVQCFGRKKTAVAVTHCKRGRGLIKINGVPIELVQPEILRYKAFEPILLLGRHR 468
           MA+  ESVQCFGRKKTAVAVT+CKRGRGLIKING PIELV+PEILRYKA EPILLLGRHR
Sbjct: 1   MASPVESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRYKAVEPILLLGRHR 60

Query: 467 FAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVA 288
           FAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVA
Sbjct: 61  FAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVA 120

Query: 287 DPRRCEPKKFGGRGARARFQKSYR 216
           DPRRCEPKKFGGRGARARFQKSYR
Sbjct: 121 DPRRCEPKKFGGRGARARFQKSYR 144


>ref|XP_002300225.1| predicted protein [Populus trichocarpa] gi|118481666|gb|ABK92774.1|
           unknown [Populus trichocarpa]
           gi|118483691|gb|ABK93739.1| unknown [Populus
           trichocarpa] gi|118487129|gb|ABK95393.1| unknown
           [Populus trichocarpa] gi|222847483|gb|EEE85030.1|
           predicted protein [Populus trichocarpa]
          Length = 146

 Score =  274 bits (700), Expect = 1e-71
 Identities = 139/146 (95%), Positives = 142/146 (97%), Gaps = 2/146 (1%)
 Frame = -3

Query: 647 MATA--TESVQCFGRKKTAVAVTHCKRGRGLIKINGVPIELVQPEILRYKAFEPILLLGR 474
           MATA  TESVQCFGRKKTAVAVTHCKRGRGLIKING PIELV+PEILR+KA+EPILLLGR
Sbjct: 1   MATAAPTESVQCFGRKKTAVAVTHCKRGRGLIKINGSPIELVEPEILRFKAYEPILLLGR 60

Query: 473 HRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLL 294
           HRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLL
Sbjct: 61  HRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLL 120

Query: 293 VADPRRCEPKKFGGRGARARFQKSYR 216
           VADPRRCE KKFGGRGARARFQKSYR
Sbjct: 121 VADPRRCETKKFGGRGARARFQKSYR 146


>gb|ABK20993.1| unknown [Picea sitchensis] gi|116781861|gb|ABK22272.1| unknown
           [Picea sitchensis] gi|224285075|gb|ACN40265.1| unknown
           [Picea sitchensis]
          Length = 143

 Score =  274 bits (700), Expect = 1e-71
 Identities = 135/141 (95%), Positives = 139/141 (98%)
 Frame = -3

Query: 638 ATESVQCFGRKKTAVAVTHCKRGRGLIKINGVPIELVQPEILRYKAFEPILLLGRHRFAG 459
           A +SVQCFGRKKTAVAVT+CKRGRGLIKING PIEL++PEILRYKAFEPILLLGRHRFAG
Sbjct: 3   AVDSVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELIEPEILRYKAFEPILLLGRHRFAG 62

Query: 458 VDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPR 279
           VDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPR
Sbjct: 63  VDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPR 122

Query: 278 RCEPKKFGGRGARARFQKSYR 216
           RCEPKKFGGRGARARFQKSYR
Sbjct: 123 RCEPKKFGGRGARARFQKSYR 143


Top