BLASTX nr result

ID: Scutellaria23_contig00000616 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00000616
         (1329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002888084.1| hypothetical protein ARALYDRAFT_475174 [Arab...   485   e-135
ref|NP_176347.1| light-harvesting complex I chlorophyll a/b bind...   484   e-134
dbj|BAF00366.1| PSI type III chlorophyll a/b-binding protein [Ar...   481   e-133
ref|XP_002524566.1| chlorophyll A/B binding protein, putative [R...   481   e-133
gb|AAA18206.1| PSI type III chlorophyll a/b-binding protein [Ara...   479   e-133

>ref|XP_002888084.1| hypothetical protein ARALYDRAFT_475174 [Arabidopsis lyrata subsp.
           lyrata] gi|297333925|gb|EFH64343.1| hypothetical protein
           ARALYDRAFT_475174 [Arabidopsis lyrata subsp. lyrata]
          Length = 273

 Score =  485 bits (1249), Expect = e-135
 Identities = 234/255 (91%), Positives = 242/255 (94%), Gaps = 1/255 (0%)
 Frame = +3

Query: 195 RQILGGRPLQS-SRKPSSFLVKAASTPPVKQGGDRQLWFASKQSLSYLDGSLPGDFGFDP 371
           RQI G +P+ S S+K SSF+VKA +TPPVKQG +R LWFAS QSLSYLDGSLPGD+GFDP
Sbjct: 19  RQIFGSKPVASASQKKSSFVVKATATPPVKQGANRPLWFASSQSLSYLDGSLPGDYGFDP 78

Query: 372 LGLSDPEGTGGFIEPRWLAYGEIINGRFAMLGAAGAIAPEILGKAGLIPPETALPWFQTG 551
           LGLSDPEGTGGFIEPRWLAYGEIINGRFAMLGAAGAIAPEILGKAGLIPPETALPWFQTG
Sbjct: 79  LGLSDPEGTGGFIEPRWLAYGEIINGRFAMLGAAGAIAPEILGKAGLIPPETALPWFQTG 138

Query: 552 VIPPAGTYTYWADPYTLFVFEMALMGFAEHRRLQDWYNPGSMGKQYFLGLEKGLAGSGNP 731
           VIPPAGTYTYWAD YTLFV EMALMGFAEHRRLQDWYNPGSMGKQYFLGLEKGLAGSGNP
Sbjct: 139 VIPPAGTYTYWADNYTLFVLEMALMGFAEHRRLQDWYNPGSMGKQYFLGLEKGLAGSGNP 198

Query: 732 AYPGGPIFNPLGFGKDEKSLNELKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHL 911
           AYPGGP FNPLGFGKDEKSL ELKLKEVKNGRLAMLAILGYF+QGLVTGVGPYQNLLDHL
Sbjct: 199 AYPGGPFFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHL 258

Query: 912 ADPVNNNVLTSLKFH 956
           ADPVNNNVLTSLKFH
Sbjct: 259 ADPVNNNVLTSLKFH 273


>ref|NP_176347.1| light-harvesting complex I chlorophyll a/b binding protein 3
           [Arabidopsis thaliana] gi|334183551|ref|NP_001185280.1|
           light-harvesting complex I chlorophyll a/b binding
           protein 3 [Arabidopsis thaliana]
           gi|4585882|gb|AAD25555.1|AC005850_12 PSI type III
           chlorophyll a/b-binding protein [Arabidopsis thaliana]
           gi|16649019|gb|AAL24361.1| PSI type III chlorophyll
           a/b-binding protein [Arabidopsis thaliana]
           gi|20260044|gb|AAM13369.1| PSI type III chlorophyll
           a/b-binding protein [Arabidopsis thaliana]
           gi|332195725|gb|AEE33846.1| light-harvesting complex I
           chlorophyll a/b binding protein 3 [Arabidopsis thaliana]
           gi|332195727|gb|AEE33848.1| light-harvesting complex I
           chlorophyll a/b binding protein 3 [Arabidopsis thaliana]
          Length = 273

 Score =  484 bits (1245), Expect = e-134
 Identities = 234/255 (91%), Positives = 242/255 (94%), Gaps = 1/255 (0%)
 Frame = +3

Query: 195 RQILGGRPLQS-SRKPSSFLVKAASTPPVKQGGDRQLWFASKQSLSYLDGSLPGDFGFDP 371
           RQI G +P+ S S+K SSF+VKAA+TPPVKQG +R LWFAS QSLSYLDGSLPGD+GFDP
Sbjct: 19  RQIFGSKPVASASQKKSSFVVKAAATPPVKQGANRPLWFASSQSLSYLDGSLPGDYGFDP 78

Query: 372 LGLSDPEGTGGFIEPRWLAYGEIINGRFAMLGAAGAIAPEILGKAGLIPPETALPWFQTG 551
           LGLSDPEGTGGFIEPRWLAYGEIINGRFAMLGAAGAIAPEILGKAGLIP ETALPWFQTG
Sbjct: 79  LGLSDPEGTGGFIEPRWLAYGEIINGRFAMLGAAGAIAPEILGKAGLIPAETALPWFQTG 138

Query: 552 VIPPAGTYTYWADPYTLFVFEMALMGFAEHRRLQDWYNPGSMGKQYFLGLEKGLAGSGNP 731
           VIPPAGTYTYWAD YTLFV EMALMGFAEHRRLQDWYNPGSMGKQYFLGLEKGLAGSGNP
Sbjct: 139 VIPPAGTYTYWADNYTLFVLEMALMGFAEHRRLQDWYNPGSMGKQYFLGLEKGLAGSGNP 198

Query: 732 AYPGGPIFNPLGFGKDEKSLNELKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHL 911
           AYPGGP FNPLGFGKDEKSL ELKLKEVKNGRLAMLAILGYF+QGLVTGVGPYQNLLDHL
Sbjct: 199 AYPGGPFFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHL 258

Query: 912 ADPVNNNVLTSLKFH 956
           ADPVNNNVLTSLKFH
Sbjct: 259 ADPVNNNVLTSLKFH 273


>dbj|BAF00366.1| PSI type III chlorophyll a/b-binding protein [Arabidopsis thaliana]
          Length = 273

 Score =  481 bits (1238), Expect = e-133
 Identities = 233/255 (91%), Positives = 241/255 (94%), Gaps = 1/255 (0%)
 Frame = +3

Query: 195 RQILGGRPLQS-SRKPSSFLVKAASTPPVKQGGDRQLWFASKQSLSYLDGSLPGDFGFDP 371
           RQI G +P+ S S+K SSF+VKAA+TPPVKQG +R LWFAS QSLSYLDGSLPGD+GFDP
Sbjct: 19  RQIFGSKPVASASQKKSSFVVKAAATPPVKQGANRPLWFASSQSLSYLDGSLPGDYGFDP 78

Query: 372 LGLSDPEGTGGFIEPRWLAYGEIINGRFAMLGAAGAIAPEILGKAGLIPPETALPWFQTG 551
           LGLSDPEGTGGFIEPRWLAYGEIINGRFAMLGAAGAIAPEILGKAGLIP ETALPWFQTG
Sbjct: 79  LGLSDPEGTGGFIEPRWLAYGEIINGRFAMLGAAGAIAPEILGKAGLIPAETALPWFQTG 138

Query: 552 VIPPAGTYTYWADPYTLFVFEMALMGFAEHRRLQDWYNPGSMGKQYFLGLEKGLAGSGNP 731
           VIPPAGTYTYWAD YTLFV EMALMGFAEHRRLQDWYNPGSMGKQYFLGLEKGLAGSGNP
Sbjct: 139 VIPPAGTYTYWADNYTLFVLEMALMGFAEHRRLQDWYNPGSMGKQYFLGLEKGLAGSGNP 198

Query: 732 AYPGGPIFNPLGFGKDEKSLNELKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHL 911
           AYPGGP FNPLGFGKDEKSL ELKLKEVKNGRLAMLAILGYF+QGLVTGVGPYQNLLDHL
Sbjct: 199 AYPGGPFFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHL 258

Query: 912 ADPVNNNVLTSLKFH 956
           A PVNNNVLTSLKFH
Sbjct: 259 AGPVNNNVLTSLKFH 273


>ref|XP_002524566.1| chlorophyll A/B binding protein, putative [Ricinus communis]
           gi|223536119|gb|EEF37774.1| chlorophyll A/B binding
           protein, putative [Ricinus communis]
          Length = 273

 Score =  481 bits (1237), Expect = e-133
 Identities = 233/255 (91%), Positives = 241/255 (94%), Gaps = 1/255 (0%)
 Frame = +3

Query: 195 RQILGGRP-LQSSRKPSSFLVKAASTPPVKQGGDRQLWFASKQSLSYLDGSLPGDFGFDP 371
           RQILG R    SSRK SSF+V+A+STPPVKQG DRQLWFASKQSL+YLDGSLPGDFGFDP
Sbjct: 19  RQILGARSSFGSSRKSSSFVVRASSTPPVKQGADRQLWFASKQSLTYLDGSLPGDFGFDP 78

Query: 372 LGLSDPEGTGGFIEPRWLAYGEIINGRFAMLGAAGAIAPEILGKAGLIPPETALPWFQTG 551
           LGLSDPEGTGGFIEP+WLAYGEIINGRFAMLGAAGAIAPEILGKAGLIPPETALPWFQTG
Sbjct: 79  LGLSDPEGTGGFIEPKWLAYGEIINGRFAMLGAAGAIAPEILGKAGLIPPETALPWFQTG 138

Query: 552 VIPPAGTYTYWADPYTLFVFEMALMGFAEHRRLQDWYNPGSMGKQYFLGLEKGLAGSGNP 731
           VIPPAGTY YWADPYTLFVFEMALMGFAEHRR QDW  PGSMGKQYFLGLEK L GSG+P
Sbjct: 139 VIPPAGTYDYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDP 198

Query: 732 AYPGGPIFNPLGFGKDEKSLNELKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHL 911
           AYPGGP+FNPLGFGKDEKS+ ELKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHL
Sbjct: 199 AYPGGPLFNPLGFGKDEKSMKELKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHL 258

Query: 912 ADPVNNNVLTSLKFH 956
           ADPVNNNVLTSLKFH
Sbjct: 259 ADPVNNNVLTSLKFH 273


>gb|AAA18206.1| PSI type III chlorophyll a/b-binding protein [Arabidopsis thaliana]
          Length = 273

 Score =  479 bits (1233), Expect = e-133
 Identities = 232/255 (90%), Positives = 240/255 (94%), Gaps = 1/255 (0%)
 Frame = +3

Query: 195 RQILGGRPLQS-SRKPSSFLVKAASTPPVKQGGDRQLWFASKQSLSYLDGSLPGDFGFDP 371
           RQI G +P+ S S+K SSF+VKAA+ PPVKQG +R LW AS QSLSYLDGSLPGD+GFDP
Sbjct: 19  RQIFGSKPVASASQKKSSFVVKAAAAPPVKQGANRPLWVASSQSLSYLDGSLPGDYGFDP 78

Query: 372 LGLSDPEGTGGFIEPRWLAYGEIINGRFAMLGAAGAIAPEILGKAGLIPPETALPWFQTG 551
           LGLSDPEGTGGFIEPRWLAYGEIINGRFAMLGAAGAIAPEILGKAGLIP ETALPWFQTG
Sbjct: 79  LGLSDPEGTGGFIEPRWLAYGEIINGRFAMLGAAGAIAPEILGKAGLIPAETALPWFQTG 138

Query: 552 VIPPAGTYTYWADPYTLFVFEMALMGFAEHRRLQDWYNPGSMGKQYFLGLEKGLAGSGNP 731
           VIPPAGTYTYWAD YTLFV EMALMGFAEHRRLQDWYNPGSMGKQYFLGLEKGLAGSGNP
Sbjct: 139 VIPPAGTYTYWADNYTLFVLEMALMGFAEHRRLQDWYNPGSMGKQYFLGLEKGLAGSGNP 198

Query: 732 AYPGGPIFNPLGFGKDEKSLNELKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHL 911
           AYPGGP FNPLGFGKDEKSL ELKLKEVKNGRLAMLAILGYF+QGLVTGVGPYQNLLDHL
Sbjct: 199 AYPGGPFFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHL 258

Query: 912 ADPVNNNVLTSLKFH 956
           ADPVNNNVLTSLKFH
Sbjct: 259 ADPVNNNVLTSLKFH 273


Top