BLASTX nr result

ID: Scutellaria23_contig00000614 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00000614
         (701 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277425.1| PREDICTED: 60S ribosomal protein L27-3 isofo...   252   6e-65
gb|AFW90619.1| ribosomal protein L27 [Solanum tuberosum]              251   8e-65
ref|XP_002267478.1| PREDICTED: 60S ribosomal protein L27 [Vitis ...   249   4e-64
emb|CAN79575.1| hypothetical protein VITISV_032808 [Vitis vinifera]   247   1e-63
dbj|BAA96367.1| ribosomal protein L27 [Panax ginseng]                 246   3e-63

>ref|XP_002277425.1| PREDICTED: 60S ribosomal protein L27-3 isoform 1 [Vitis vinifera]
          Length = 135

 Score =  252 bits (643), Expect = 6e-65
 Identities = 122/135 (90%), Positives = 130/135 (96%)
 Frame = +3

Query: 48  MVKFLKPNKAVIVLQGRYAGRKAVIIRSFDDGTRERPYGHCLVAGLAKYPRKVIRKDSAK 227
           MVKFLK NKAV+VLQGR+AGRKAVI+RSFDDGTR+RPYGHCLVAG+AKYP+KVIRKDSAK
Sbjct: 1   MVKFLKQNKAVVVLQGRFAGRKAVIVRSFDDGTRDRPYGHCLVAGIAKYPKKVIRKDSAK 60

Query: 228 KQAKKSRVKCFIKLVNYNHIMPTRYTLDVDLKDVVTPDCLQSRDKKVTAAKETKARFEER 407
           K AKKSRVK FIKLVNYNH+MPTRYTLDVDLKDVVT D LQSRDKKVTAAKETKARFEER
Sbjct: 61  KTAKKSRVKAFIKLVNYNHLMPTRYTLDVDLKDVVTVDALQSRDKKVTAAKETKARFEER 120

Query: 408 FKSGKNRWFFTKLRF 452
           FK+GKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135


>gb|AFW90619.1| ribosomal protein L27 [Solanum tuberosum]
          Length = 135

 Score =  251 bits (642), Expect = 8e-65
 Identities = 119/135 (88%), Positives = 130/135 (96%)
 Frame = +3

Query: 48  MVKFLKPNKAVIVLQGRYAGRKAVIIRSFDDGTRERPYGHCLVAGLAKYPRKVIRKDSAK 227
           MVKFLKPNKAV+VLQG+YAGRKAVI+R+FDDGTR+RPYGHCLVAG+AKYP+KV+RKDSAK
Sbjct: 1   MVKFLKPNKAVVVLQGKYAGRKAVIVRAFDDGTRDRPYGHCLVAGVAKYPKKVVRKDSAK 60

Query: 228 KQAKKSRVKCFIKLVNYNHIMPTRYTLDVDLKDVVTPDCLQSRDKKVTAAKETKARFEER 407
           KQA KSRVK FIKLVNYNHIMPTRYTLDVDLK+ VT DCLQSRDKKVTAAKE KA+FEER
Sbjct: 61  KQANKSRVKTFIKLVNYNHIMPTRYTLDVDLKEAVTVDCLQSRDKKVTAAKEAKAKFEER 120

Query: 408 FKSGKNRWFFTKLRF 452
           FK+GKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135


>ref|XP_002267478.1| PREDICTED: 60S ribosomal protein L27 [Vitis vinifera]
          Length = 135

 Score =  249 bits (636), Expect = 4e-64
 Identities = 119/135 (88%), Positives = 130/135 (96%)
 Frame = +3

Query: 48  MVKFLKPNKAVIVLQGRYAGRKAVIIRSFDDGTRERPYGHCLVAGLAKYPRKVIRKDSAK 227
           MVKFLKPNKAV++LQGR+AGRKAVI+RSFDDGTR+RPYGHCLVAG+AKYP+KVIRKDSAK
Sbjct: 1   MVKFLKPNKAVVLLQGRFAGRKAVIVRSFDDGTRDRPYGHCLVAGIAKYPKKVIRKDSAK 60

Query: 228 KQAKKSRVKCFIKLVNYNHIMPTRYTLDVDLKDVVTPDCLQSRDKKVTAAKETKARFEER 407
           K AKKSRVK FIKLVNYNHIMPTRYTLDVDLKDVV+PD LQSRDKKVTAAKETK + EER
Sbjct: 61  KTAKKSRVKAFIKLVNYNHIMPTRYTLDVDLKDVVSPDVLQSRDKKVTAAKETKKKLEER 120

Query: 408 FKSGKNRWFFTKLRF 452
           FK+GKNRWFF+KLRF
Sbjct: 121 FKTGKNRWFFSKLRF 135


>emb|CAN79575.1| hypothetical protein VITISV_032808 [Vitis vinifera]
          Length = 135

 Score =  247 bits (631), Expect = 1e-63
 Identities = 118/135 (87%), Positives = 130/135 (96%)
 Frame = +3

Query: 48  MVKFLKPNKAVIVLQGRYAGRKAVIIRSFDDGTRERPYGHCLVAGLAKYPRKVIRKDSAK 227
           MVKFLKPNKAV++LQGR+AGRKAVI+RSFDDGTR+RPYGHCLVAG+AKYP+KVIRKDSAK
Sbjct: 1   MVKFLKPNKAVVLLQGRFAGRKAVIVRSFDDGTRDRPYGHCLVAGIAKYPKKVIRKDSAK 60

Query: 228 KQAKKSRVKCFIKLVNYNHIMPTRYTLDVDLKDVVTPDCLQSRDKKVTAAKETKARFEER 407
           K AKKSRVK FIKLVNYNHIMPTRYTLDV+LKDVV+PD LQSRDKKVTAAKETK + EER
Sbjct: 61  KTAKKSRVKAFIKLVNYNHIMPTRYTLDVNLKDVVSPDVLQSRDKKVTAAKETKKKLEER 120

Query: 408 FKSGKNRWFFTKLRF 452
           FK+GKNRWFF+KLRF
Sbjct: 121 FKTGKNRWFFSKLRF 135


>dbj|BAA96367.1| ribosomal protein L27 [Panax ginseng]
          Length = 135

 Score =  246 bits (628), Expect = 3e-63
 Identities = 120/135 (88%), Positives = 128/135 (94%)
 Frame = +3

Query: 48  MVKFLKPNKAVIVLQGRYAGRKAVIIRSFDDGTRERPYGHCLVAGLAKYPRKVIRKDSAK 227
           MVK LKPNKAVIVL GRYAGRK+VII+SFD+GTR+RPYGHCLVAG++KYP+KVIRKDSAK
Sbjct: 1   MVKVLKPNKAVIVLNGRYAGRKSVIIKSFDEGTRDRPYGHCLVAGISKYPKKVIRKDSAK 60

Query: 228 KQAKKSRVKCFIKLVNYNHIMPTRYTLDVDLKDVVTPDCLQSRDKKVTAAKETKARFEER 407
           K AKKSRVK FIKLVN NHIMPTRYTLDVDLKDVVT DCLQSRDKKVTAAKETKAR EER
Sbjct: 61  KTAKKSRVKAFIKLVNCNHIMPTRYTLDVDLKDVVTVDCLQSRDKKVTAAKETKARLEER 120

Query: 408 FKSGKNRWFFTKLRF 452
           FK+GKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135


Top