BLASTX nr result

ID: Scutellaria23_contig00000558 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00000558
         (758 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521161.1| photosystem I reaction center subunit IV A, ...   122   8e-26
sp|Q41229.1|PSAEB_NICSY RecName: Full=Photosystem I reaction cen...   113   4e-23
ref|XP_002301832.1| hypothetical protein POPTRDRAFT_711610 [Popu...   113   5e-23
gb|ADC53693.1| photosystem I psaE [Morus alba var. multicaulis]       112   8e-23
emb|CAD29821.2| putative photosystem I reaction centre subunit I...   110   2e-22

>ref|XP_002521161.1| photosystem I reaction center subunit IV A, chloroplast precursor
           [Ricinus communis] gi|223539730|gb|EEF41312.1|
           photosystem I reaction center subunit IV A, chloroplast
           precursor [Ricinus communis]
          Length = 141

 Score =  122 bits (306), Expect = 8e-26
 Identities = 68/136 (50%), Positives = 85/136 (62%), Gaps = 8/136 (5%)
 Frame = -2

Query: 652 SMASASCGFVVTPNVTSSTGAAAKAAVVFFPS--NRTTSSRLVVRXXXXXXXXXXXXXXX 479
           SMASA+ GF++TPNV ++T +++++ +V+FPS  N   +SRLVVR               
Sbjct: 5   SMASAASGFLLTPNVPANTNSSSRSNMVYFPSKNNNINNSRLVVRAAEEAAAPAPATTTA 64

Query: 478 XXXXXXXXXXXXXXXXXV------LRKESYWYKGVGSVVTVDQDPKTRYPVVVRFNKVNY 317
                                   LR+ESYWY G+GSVV VDQDPKTRYPVVVRF+KVNY
Sbjct: 65  PAEGEAPKPKPPPIGPKRGTKVKILRRESYWYNGIGSVVAVDQDPKTRYPVVVRFDKVNY 124

Query: 316 ANVSTNNYALDEVELV 269
           ANVSTNNYALDE+E V
Sbjct: 125 ANVSTNNYALDEIEEV 140


>sp|Q41229.1|PSAEB_NICSY RecName: Full=Photosystem I reaction center subunit IV B,
           chloroplastic; Short=PSI-E B; Contains: RecName:
           Full=Photosystem I reaction center subunit IV B isoform
           2; Flags: Precursor gi|632724|gb|AAB31705.1| photosystem
           I subunit PSI-E [Nicotiana sylvestris]
          Length = 143

 Score =  113 bits (283), Expect = 4e-23
 Identities = 73/140 (52%), Positives = 84/140 (60%), Gaps = 11/140 (7%)
 Frame = -2

Query: 655 ASMASASCGFVV-TPNVTSSTGAAAKAAVVFFPS--NRTTSS--RLVVRXXXXXXXXXXX 491
           +SMASA+ GF+V TPN+ +S   A + +++FF S  N TT++  RLVVR           
Sbjct: 4   SSMASAASGFMVATPNIATSN-TAPRTSMLFFSSSKNNTTTNFPRLVVRAAEEAAPPAAT 62

Query: 490 XXXXXXXXXXXXXXXXXXXXXV------LRKESYWYKGVGSVVTVDQDPKTRYPVVVRFN 329
                                       LRKESYWYKGVGSVV VDQDP TRYPVVVRFN
Sbjct: 63  ATAEGEAPPAKAAKPPPIGPKRGTKVRVLRKESYWYKGVGSVVAVDQDPNTRYPVVVRFN 122

Query: 328 KVNYANVSTNNYALDEVELV 269
           KVNYANVSTNNYALDEVE V
Sbjct: 123 KVNYANVSTNNYALDEVEEV 142


>ref|XP_002301832.1| hypothetical protein POPTRDRAFT_711610 [Populus trichocarpa]
           gi|222843558|gb|EEE81105.1| hypothetical protein
           POPTRDRAFT_711610 [Populus trichocarpa]
          Length = 140

 Score =  113 bits (282), Expect = 5e-23
 Identities = 65/135 (48%), Positives = 78/135 (57%), Gaps = 7/135 (5%)
 Frame = -2

Query: 652 SMASASCGFVVTPNVTSSTGAAAKAAVVFFPS--NRTTSSRLVVRXXXXXXXXXXXXXXX 479
           +MASA+ GF + P V ++T + +K  ++FF S  N    SRLVVR               
Sbjct: 5   NMASAASGFALAPTVATNTNSTSKPTMLFFSSKNNNKNYSRLVVRSAEEGASPPAATTEP 64

Query: 478 XXXXXXXXXXXXXXXXXV-----LRKESYWYKGVGSVVTVDQDPKTRYPVVVRFNKVNYA 314
                                  LRKESYW+ GVGSVV VDQDP++RYPVVVRFNKVNYA
Sbjct: 65  AVAEAPKPKPPPIGPKRGTKVKILRKESYWFNGVGSVVAVDQDPRSRYPVVVRFNKVNYA 124

Query: 313 NVSTNNYALDEVELV 269
           NVSTNNYALDE+E V
Sbjct: 125 NVSTNNYALDEIEEV 139


>gb|ADC53693.1| photosystem I psaE [Morus alba var. multicaulis]
          Length = 145

 Score =  112 bits (280), Expect = 8e-23
 Identities = 71/141 (50%), Positives = 85/141 (60%), Gaps = 14/141 (9%)
 Frame = -2

Query: 658 MASMASASCGFVVTPNVTSSTGAAAKA--AVVFFP------SNRTTS-SRLVVRXXXXXX 506
           MASMASA+ GFV+TP+V ++TGAA  +  +V FF       + R++S SRLVVR      
Sbjct: 1   MASMASAASGFVLTPSVATTTGAAVSSRNSVSFFHLKSNGNNGRSSSVSRLVVRAAEEGA 60

Query: 505 XXXXXXXXXXXXXXXXXXXXXXXXXXV-----LRKESYWYKGVGSVVTVDQDPKTRYPVV 341
                                           LR+ESYWYK VGSVV VDQDPK+RYPVV
Sbjct: 61  APPAATKPAPEGEAPKPKPEPIGPKRGTKVRILRRESYWYKDVGSVVAVDQDPKSRYPVV 120

Query: 340 VRFNKVNYANVSTNNYALDEV 278
           VRFNKVNYA+VSTNNYALDE+
Sbjct: 121 VRFNKVNYASVSTNNYALDEI 141


>emb|CAD29821.2| putative photosystem I reaction centre subunit IV [Populus x
           canadensis]
          Length = 140

 Score =  110 bits (276), Expect = 2e-22
 Identities = 64/135 (47%), Positives = 77/135 (57%), Gaps = 7/135 (5%)
 Frame = -2

Query: 652 SMASASCGFVVTPNVTSSTGAAAKAAVVFFPS--NRTTSSRLVVRXXXXXXXXXXXXXXX 479
           +MASA+ GF +TP V ++T + +K  ++FF S  N    SRLVVR               
Sbjct: 5   NMASAASGFALTPAVATNTNSTSKPTMLFFSSKNNNKNYSRLVVRSAEEGASPPAATTEP 64

Query: 478 XXXXXXXXXXXXXXXXXV-----LRKESYWYKGVGSVVTVDQDPKTRYPVVVRFNKVNYA 314
                                  LRKESYW+ G GSV  VDQDP++RYPVVVRFNKVNYA
Sbjct: 65  AVAEAPKPKPPPIGPKRGTKVKILRKESYWFNGFGSVAAVDQDPRSRYPVVVRFNKVNYA 124

Query: 313 NVSTNNYALDEVELV 269
           NVSTNNYALDE+E V
Sbjct: 125 NVSTNNYALDEIEEV 139


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