BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00000381
         (3549 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF64710.1| putative transposase [Ipomoea tricolor]                63   4e-11
gb|AAC62789.1| contains similarity to replication protein A1 [Ar...    49   9e-06

>dbj|BAF64710.1| putative transposase [Ipomoea tricolor]
          Length = 517

 Score = 63.2 bits (152), Expect(2) = 4e-11
 Identities = 39/157 (24%), Positives = 72/157 (45%)
 Frame = -3

Query: 3073 QGTRLHATIKRDHISRWVEILREGKLYAIKNFAVLHNRMKFKTTNNKFMIMFLNDTRAFE 2894
            +GT LH  I ++ + ++  +L+ G++Y+I+NF V+ N   +KT+ +K+M+ F   T   E
Sbjct: 50   EGTVLHVNIPKEFVEKYSAMLKIGQVYSIRNFLVISNFYTYKTSPHKYMLKFYYKTVVRE 109

Query: 2893 LFDDTFPRFIYNFRSFDKLAIVEDLIETEMFGNIFISFKN*LHSLFICLCYIP*HLYFVY 2714
            L D  FP  ++  +   +L    D+ E E                               
Sbjct: 110  LKDIVFPSHMFRLQPLSQLKQKIDINEKE------------------------------- 138

Query: 2713 F*IVDVIGRISNVDGPYTKHCDNRISRWIKIILEDTK 2603
              ++D+IG +  ++ P  K    + +R I  +LEDT+
Sbjct: 139  --LIDLIGMVVEINTPQDKVIAGKATRLIDFLLEDTE 173



 Score = 33.9 bits (76), Expect(2) = 4e-11
 Identities = 14/31 (45%), Positives = 22/31 (70%)
 Frame = -2

Query: 3266 MAPTFSMISEIGPSRTQWALKLRLIRAYQIP 3174
            MAP + +  +I P  T  A+K+RLIR+Y++P
Sbjct: 1    MAPLYILGRDISPMNTTSAIKVRLIRSYEVP 31



 Score = 52.0 bits (123), Expect(2) = 1e-08
 Identities = 33/115 (28%), Positives = 52/115 (45%)
 Frame = -3

Query: 1384 RYKVEVLVQDTTDNARLMLWDQQCIELLGKTVTDIRESLNEVFISVLIH*FLPLFDYCTY 1205
            RY+V+V   D   NA  +LWD++C ELLG + TD+R+ + E           PL      
Sbjct: 344  RYRVKVRAVDLDGNAPFILWDKECTELLGISATDLRQKILEG----------PL------ 387

Query: 1204 NLIHLYILKQADDNETIPDSVKWLLDQEIYFKVQVKPDQTSNYHGSYTVKKVSRD 1040
                            IP  ++ L+   + F++ V+ +Q  N H ++ V KV  D
Sbjct: 388  ---------------RIPREIESLVGLAMLFRIAVRKEQFDNLHNAFAVMKVMND 427



 Score = 36.6 bits (83), Expect(2) = 1e-08
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
 Frame = -1

Query: 1611 GSFWVNARIINIESDY-WWYISCIK--CYRKFDQVEDKFYCSSC 1489
            G FWV A+I+ IES + W+Y+SC    C +K       + C  C
Sbjct: 291  GDFWVAAKIVGIESSWDWFYVSCKSHGCNKKLTLRNTLYDCDKC 334


>gb|AAC62789.1| contains similarity to replication protein A1 [Arabidopsis thaliana]
            gi|10177641|dbj|BAB10788.1| replication protein A1-like
            [Arabidopsis thaliana]
          Length = 1073

 Score = 48.9 bits (115), Expect(2) = 9e-06
 Identities = 33/116 (28%), Positives = 52/116 (44%), Gaps = 1/116 (0%)
 Frame = -3

Query: 1393 IFGRYKVEVLVQDTTDNARLMLWDQQCIELLGKTVTDI-RESLNEVFISVLIH*FLPLFD 1217
            +  RY +   V D+T  A+L+L+D  C E++G++ T +   S+NE+              
Sbjct: 320  VVSRYMIYAKVMDSTSEAKLVLFDSICFEIIGESATSVLNGSVNEI-------------- 365

Query: 1216 YCTYNLIHLYILKQADDNETIPDSVKWLLDQEIYFKVQVKPDQTSNYHGSYTVKKV 1049
                           +D E +PDSVK L+ +   F V V+ D  S+    Y V KV
Sbjct: 366  ---------------EDPEDLPDSVKNLIGKTFLFLVWVEKDNISDGKEIYKVSKV 406



 Score = 29.6 bits (65), Expect(2) = 9e-06
 Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 13/54 (24%)
 Frame = -1

Query: 1611 GSFWVNARIINIESDY-WWYISCIKCYRKFDQV------------EDKFYCSSC 1489
            G   V   I  I++D+ W+YISC  C +K + +            + KF+C +C
Sbjct: 260  GKVRVLCTIYAIDTDWAWYYISCKTCNKKVNHIHAGVNGVNNKGKKPKFWCDTC 313