BLASTX nr result

ID: Scutellaria23_contig00000338 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00000338
         (1188 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525033.1| conserved hypothetical protein [Ricinus comm...   189   1e-45
ref|XP_002274855.1| PREDICTED: uncharacterized protein LOC100246...   186   8e-45
ref|XP_004158834.1| PREDICTED: DNA-directed RNA polymerase II su...   174   4e-41
ref|XP_004134991.1| PREDICTED: uncharacterized protein LOC101213...   174   4e-41
ref|XP_002329936.1| predicted protein [Populus trichocarpa] gi|2...   172   1e-40

>ref|XP_002525033.1| conserved hypothetical protein [Ricinus communis]
           gi|223535695|gb|EEF37360.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 203

 Score =  189 bits (480), Expect = 1e-45
 Identities = 91/176 (51%), Positives = 126/176 (71%)
 Frame = +2

Query: 194 GNGDNSTRSKKGRKVQFESEDSVEPVTPISNGTTNTSAMKGGKGDNVANGSKKSTGKAPK 373
           G  D S +SK+G+KVQF S+ ++                KGGKGD V+NG K S+ K P+
Sbjct: 29  GKDDTSAKSKRGKKVQFNSQGNMS---------------KGGKGDKVSNGVKISSTKEPQ 73

Query: 374 PVEQRLDQEIPPNSVCLMDCEATEILQGIQDQMVILSKDPDIKLPVSFDMGLKYAKRGGT 553
           P+E +++Q++P N+ CLMDCEA ++LQGIQ+QMV+LS+DP IKLPVSFD  L++A+ G  
Sbjct: 74  PLELKIEQDLPKNAKCLMDCEAAQVLQGIQEQMVLLSRDPTIKLPVSFDRALQHARTGAR 133

Query: 554 FAKPKTVKNLFEPLKKYGVSDCEICLIANICPESVDEVAALIPALKPKMNRLGDPL 721
           F  P++V+ + E LKK+GVS+ EIC IAN+CP+ VDEV AL+P+LK K N L +PL
Sbjct: 134 FTNPQSVRRILEGLKKHGVSEGEICTIANVCPDGVDEVFALVPSLKSKKNVLREPL 189


>ref|XP_002274855.1| PREDICTED: uncharacterized protein LOC100246461 isoform 1 [Vitis
           vinifera] gi|359495604|ref|XP_003635035.1| PREDICTED:
           uncharacterized protein LOC100246461 isoform 2 [Vitis
           vinifera] gi|297736694|emb|CBI25730.3| unnamed protein
           product [Vitis vinifera]
          Length = 239

 Score =  186 bits (473), Expect = 8e-45
 Identities = 93/184 (50%), Positives = 129/184 (70%), Gaps = 8/184 (4%)
 Frame = +2

Query: 194 GNGDNSTRSKKGRKVQFESEDSVEP---VTPISNGTTNT-----SAMKGGKGDNVANGSK 349
           G  D++ +SK+GRKVQF +    E     + +S G T+         KGGKG  V NG K
Sbjct: 30  GKDDSAAKSKRGRKVQFNNGGLPEARLTSSLMSGGKTDIPIAKGDLSKGGKGGRVLNGEK 89

Query: 350 KSTGKAPKPVEQRLDQEIPPNSVCLMDCEATEILQGIQDQMVILSKDPDIKLPVSFDMGL 529
            +  K P P+E R++QE+P N+ C+MDCEA  IL+GIQ+QMV+LS+DP IK+P+SF+ GL
Sbjct: 90  SAVPKPPAPLELRIEQELPKNAKCMMDCEAALILKGIQEQMVVLSEDPTIKIPLSFNKGL 149

Query: 530 KYAKRGGTFAKPKTVKNLFEPLKKYGVSDCEICLIANICPESVDEVAALIPALKPKMNRL 709
           +YA+    +A P++V+ + EPL KYGVSD EIC+IAN CPE++DEV AL+P+LKPK + L
Sbjct: 150 QYAQSSNCYASPQSVRLVLEPLSKYGVSDGEICVIANTCPETIDEVFALVPSLKPKWSTL 209

Query: 710 GDPL 721
            +PL
Sbjct: 210 REPL 213


>ref|XP_004158834.1| PREDICTED: DNA-directed RNA polymerase II subunit rpb4-like
           [Cucumis sativus]
          Length = 220

 Score =  174 bits (441), Expect = 4e-41
 Identities = 89/180 (49%), Positives = 124/180 (68%), Gaps = 4/180 (2%)
 Frame = +2

Query: 194 GNGDNSTRSKKGRKVQFESEDSVEPVTPISNGTT--NTSAMKGGKGDNVANGSKKSTGKA 367
           G  D+ ++ KKGRKVQF+++ SV+     S   +  N    KGGKG N    +K S  K 
Sbjct: 32  GKDDSLSKLKKGRKVQFDAQGSVDATNTFSMKYSGKNGDLGKGGKGAN----TKASIAKE 87

Query: 368 PKPVEQRLDQEIPPN--SVCLMDCEATEILQGIQDQMVILSKDPDIKLPVSFDMGLKYAK 541
           P+ +E +++QE+P N    CLMDCEA ++LQGIQDQMV LS DP IK+P SFD GL+YAK
Sbjct: 88  PQALELKIEQELPKNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAK 147

Query: 542 RGGTFAKPKTVKNLFEPLKKYGVSDCEICLIANICPESVDEVAALIPALKPKMNRLGDPL 721
           R   +   ++V+ + E LKKYGV+D EIC+IAN+CP++ DEV AL+P+LK K ++L +P+
Sbjct: 148 RANHYVNAESVRPVLETLKKYGVTDSEICVIANVCPDTTDEVFALLPSLKRKRSKLSEPI 207


>ref|XP_004134991.1| PREDICTED: uncharacterized protein LOC101213971 [Cucumis sativus]
          Length = 242

 Score =  174 bits (441), Expect = 4e-41
 Identities = 89/180 (49%), Positives = 124/180 (68%), Gaps = 4/180 (2%)
 Frame = +2

Query: 194 GNGDNSTRSKKGRKVQFESEDSVEPVTPISNGTT--NTSAMKGGKGDNVANGSKKSTGKA 367
           G  D+ ++ KKGRKVQF+++ SV+     S   +  N    KGGKG N    +K S  K 
Sbjct: 32  GKDDSLSKLKKGRKVQFDAQGSVDATNTFSMKYSGKNGDLGKGGKGAN----TKASIAKE 87

Query: 368 PKPVEQRLDQEIPPN--SVCLMDCEATEILQGIQDQMVILSKDPDIKLPVSFDMGLKYAK 541
           P+ +E +++QE+P N    CLMDCEA ++LQGIQDQMV LS DP IK+P SFD GL+YAK
Sbjct: 88  PQALELKIEQELPKNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAK 147

Query: 542 RGGTFAKPKTVKNLFEPLKKYGVSDCEICLIANICPESVDEVAALIPALKPKMNRLGDPL 721
           R   +   ++V+ + E LKKYGV+D EIC+IAN+CP++ DEV AL+P+LK K ++L +P+
Sbjct: 148 RANHYVNAESVRPVLETLKKYGVTDSEICVIANVCPDTTDEVFALLPSLKRKRSKLSEPI 207


>ref|XP_002329936.1| predicted protein [Populus trichocarpa] gi|222871958|gb|EEF09089.1|
           predicted protein [Populus trichocarpa]
          Length = 197

 Score =  172 bits (436), Expect = 1e-40
 Identities = 87/168 (51%), Positives = 113/168 (67%)
 Frame = +2

Query: 218 SKKGRKVQFESEDSVEPVTPISNGTTNTSAMKGGKGDNVANGSKKSTGKAPKPVEQRLDQ 397
           S  GRK+ FESE ++                KGGKG  +ANG K    K P P+E +++ 
Sbjct: 31  SNNGRKIHFESEGNLS---------------KGGKGGKIANGGKSPMTKEPPPLELKIES 75

Query: 398 EIPPNSVCLMDCEATEILQGIQDQMVILSKDPDIKLPVSFDMGLKYAKRGGTFAKPKTVK 577
           E+P N+  LMDCEA +ILQGIQDQMV+LS+DP IKLPVSFD GL+YAK G  +  P++V+
Sbjct: 76  ELPQNAKPLMDCEAAQILQGIQDQMVLLSQDPTIKLPVSFDKGLQYAKNGAHYTNPQSVR 135

Query: 578 NLFEPLKKYGVSDCEICLIANICPESVDEVAALIPALKPKMNRLGDPL 721
            + E L+KYGVSD EI LIAN+ PE+ DE  AL+P+LK K + L +PL
Sbjct: 136 RVLEALRKYGVSDGEISLIANVFPETADEAFALVPSLKSKASTLREPL 183


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