BLASTX nr result

ID: Scutellaria23_contig00000332 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00000332
         (1226 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFX67041.1| RNA recognition motif containing protein [Solanum...   261   3e-67
gb|AAT40482.1| hypothetical protein [Solanum demissum]                261   3e-67
ref|XP_002276614.1| PREDICTED: protein vip1 isoform 1 [Vitis vin...   250   5e-64
ref|XP_002520109.1| nucleic acid binding protein, putative [Rici...   240   6e-61
gb|AFK43947.1| unknown [Lotus japonicus]                              230   6e-58

>gb|AFX67041.1| RNA recognition motif containing protein [Solanum tuberosum]
          Length = 245

 Score =  261 bits (667), Expect = 3e-67
 Identities = 141/245 (57%), Positives = 169/245 (68%), Gaps = 7/245 (2%)
 Frame = -1

Query: 1043 MSSRGYTVQIKNLALNTTEKDVRGFLAFCGSIQCVEFVRAGESVCTAYVTFRNPHAVETA 864
            M+  GYT ++  L+   TEKDV+ F  FCG+I+ VE VRAGE   TAYVTFRNPHA+ETA
Sbjct: 1    MNPGGYTAEVTGLSPTATEKDVQEFFGFCGAIEHVEIVRAGEHASTAYVTFRNPHALETA 60

Query: 863  VLLSGDTILDQPVFITQWGHYKDDHNLRNHTSWKIEDESNPRHSQKG---VPSTGEAVSS 693
            VLLSG  ILDQ V IT WGHY+D+ +  NH+SWK +++       +G   V S GEAV+ 
Sbjct: 61   VLLSGAAILDQRVCITSWGHYQDEFDYWNHSSWKPQEDCYSSQDSQGHYFVSSAGEAVTL 120

Query: 692  AQGVVKTMAAKGYEIGKDALGKAKAIGESHQVP----TKVANLSERIGLTDKIFAGVEAT 525
             Q VVKTM ++GY +GK ALGKAKA  ESH +     +KVA+LSERIGLTDK  AGVE  
Sbjct: 121  TQDVVKTMLSQGYVLGKGALGKAKAFDESHGLSATAVSKVADLSERIGLTDKFCAGVEVA 180

Query: 524  RSVDQRYHISGTTKSVVSATQRXXXXXXXXXXXXXXXSKGALWLSGALSKASQVAGDLGN 345
            RSVDQRYHIS TT+S VSAT R               SKGALW+SGALSKA+Q A DLG+
Sbjct: 181  RSVDQRYHISDTTRSAVSATGRTAISAATAVVNSSYFSKGALWMSGALSKAAQAAADLGS 240

Query: 344  RGVTK 330
            RG+ K
Sbjct: 241  RGINK 245


>gb|AAT40482.1| hypothetical protein [Solanum demissum]
          Length = 244

 Score =  261 bits (666), Expect = 3e-67
 Identities = 142/244 (58%), Positives = 170/244 (69%), Gaps = 6/244 (2%)
 Frame = -1

Query: 1043 MSSRGYTVQIKNLALNTTEKDVRGFLAFCGSIQCVEFVRAGESVCTAYVTFRNPHAVETA 864
            M+  GYT ++  L+   TEKDV+ F  FCG+I+ VE VRAGE   TAYVTFRNPHA+ETA
Sbjct: 1    MNPGGYTAEVTGLSPAATEKDVQEFFGFCGAIEHVEIVRAGEHASTAYVTFRNPHALETA 60

Query: 863  VLLSGDTILDQPVFITQWGHYKDDHNLRNHTSWKIEDESNPRHSQKG--VPSTGEAVSSA 690
            VLLSG  ILDQ V IT WGHY+D+ +  NH+SWK +++ +   SQ    V S GEAV+  
Sbjct: 61   VLLSGAAILDQRVCITSWGHYQDEFDYWNHSSWKPQEDCHSSDSQGHYFVSSAGEAVTLT 120

Query: 689  QGVVKTMAAKGYEIGKDALGKAKAIGESHQVP----TKVANLSERIGLTDKIFAGVEATR 522
            Q VVKTM ++GY +GK ALGKAKA  ESH +     +KVA+LSERIGLTDK  AGVE  R
Sbjct: 121  QDVVKTMLSQGYVLGKGALGKAKAFDESHGLSATAVSKVADLSERIGLTDKFCAGVEVAR 180

Query: 521  SVDQRYHISGTTKSVVSATQRXXXXXXXXXXXXXXXSKGALWLSGALSKASQVAGDLGNR 342
            SVDQRYHIS TT+S VSAT R               SKGALW+SGALSKA+Q A DLG+R
Sbjct: 181  SVDQRYHISDTTRSAVSATGRTAISAATAVVNSSYFSKGALWMSGALSKAAQAAADLGSR 240

Query: 341  GVTK 330
            G+ K
Sbjct: 241  GINK 244


>ref|XP_002276614.1| PREDICTED: protein vip1 isoform 1 [Vitis vinifera]
            gi|225425750|ref|XP_002276661.1| PREDICTED: protein vip1
            isoform 2 [Vitis vinifera]
            gi|359473262|ref|XP_003631279.1| PREDICTED: protein vip1
            [Vitis vinifera]
          Length = 246

 Score =  250 bits (639), Expect = 5e-64
 Identities = 138/246 (56%), Positives = 170/246 (69%), Gaps = 8/246 (3%)
 Frame = -1

Query: 1043 MSSRGYTVQIKNLALNTTEKDVRGFLAFCGSIQCVEFVR-AGESVCTAYVTFRNPHAVET 867
            MS+ G+T+++ +L+   TEKDV  F AF G+I+ VE VR A E  CTAYVTF++ +AVET
Sbjct: 1    MSTSGHTIEVTSLSPKVTEKDVYDFFAFSGAIERVEMVRSADECACTAYVTFKDAYAVET 60

Query: 866  AVLLSGDTILDQPVFITQWGHYKDDHNLRNHTSWKIEDESNPRH---SQKGVPSTGEAVS 696
            AVLLSG TI+DQ V IT+WGHY+D+ +L N  +WK+EDE++  H   + +  P  GEAV+
Sbjct: 61   AVLLSGATIVDQRVCITRWGHYEDEFDLWNRPTWKLEDETSSTHAPETNRSYPDAGEAVT 120

Query: 695  SAQGVVKTMAAKGYEIGKDALGKAKAIGESHQ----VPTKVANLSERIGLTDKIFAGVEA 528
             AQ VVKTM AKGY +GKDAL KAK   ESHQ        VA LS+RIGLTDK  AGVEA
Sbjct: 121  MAQEVVKTMLAKGYILGKDALSKAKTFDESHQFSATAVATVAELSQRIGLTDKFCAGVEA 180

Query: 527  TRSVDQRYHISGTTKSVVSATQRXXXXXXXXXXXXXXXSKGALWLSGALSKASQVAGDLG 348
             +SVDQRYHIS  TKS VSAT R               SKGALW+S ALS+A++ AGDLG
Sbjct: 181  AKSVDQRYHISEITKSAVSATGRTAAAAATTVVNSSYFSKGALWVSDALSRAAKAAGDLG 240

Query: 347  NRGVTK 330
            + GV K
Sbjct: 241  SHGVNK 246


>ref|XP_002520109.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223540601|gb|EEF42164.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 245

 Score =  240 bits (612), Expect = 6e-61
 Identities = 131/243 (53%), Positives = 165/243 (67%), Gaps = 7/243 (2%)
 Frame = -1

Query: 1043 MSSRGYTVQIKNLALNTTEKDVRGFLAFCGSIQCVEFVRAGESVCTAYVTFRNPHAVETA 864
            M   G+ V++  L+ +TTEKD+  F +F GSI+ VE VR G+  CTAYVTF+N ++ ETA
Sbjct: 1    MDQDGHAVEVTGLSPSTTEKDLYDFFSFSGSIEHVEIVRCGDYACTAYVTFKNAYSQETA 60

Query: 863  VLLSGDTILDQPVFITQWGHYKDDHNLRNHTSWKIEDE---SNPRHSQKGVPSTGEAVSS 693
            VLLSG TIL++ V IT+WGHY D+ +L N  S ++EDE   ++P    + VPS GEAV  
Sbjct: 61   VLLSGATILEERVCITRWGHYIDEFDLWNTPSLRVEDERESTHPPERSQYVPSAGEAVIM 120

Query: 692  AQGVVKTMAAKGYEIGKDALGKAKAIGESHQV----PTKVANLSERIGLTDKIFAGVEAT 525
            AQ VVK M AKGY +GKD L KAKA  ESHQV      KVA  +ERIGL DKIFAG+EA 
Sbjct: 121  AQEVVKNMVAKGYVLGKDTLSKAKAFDESHQVTATAAAKVAEFTERIGLADKIFAGMEAM 180

Query: 524  RSVDQRYHISGTTKSVVSATQRXXXXXXXXXXXXXXXSKGALWLSGALSKASQVAGDLGN 345
            +SVDQ+YH+S  TKS VSAT R               SKGALW+SGAL++A++ A D+G 
Sbjct: 181  KSVDQKYHVSDMTKSAVSATGRTAVAAASTVVNSSYFSKGALWVSGALNRAAKAAADIGA 240

Query: 344  RGV 336
            RGV
Sbjct: 241  RGV 243


>gb|AFK43947.1| unknown [Lotus japonicus]
          Length = 245

 Score =  230 bits (586), Expect = 6e-58
 Identities = 127/240 (52%), Positives = 162/240 (67%), Gaps = 6/240 (2%)
 Frame = -1

Query: 1040 SSRGYTVQIKNLALNTTEKDVRGFLAFCGSIQCVEFVRAGESVCTAYVTFRNPHAVETAV 861
            S  GYTV++  L+ N TEKDV  F +F G+IQ VE +R+G+  CTAYVTF++ ++ ETA 
Sbjct: 3    SGGGYTVEVTGLSPNATEKDVHDFFSFSGAIQHVEIIRSGDYACTAYVTFKDAYSQETAC 62

Query: 860  LLSGDTILDQPVFITQWGHYKDDHNLRNHTSWKIEDE--SNPRHSQKGVPSTGEAVSSAQ 687
            LLSG TILDQ V IT+WG+Y+D ++  N  S+  E+E  S   HS + V S GEAV+ AQ
Sbjct: 63   LLSGATILDQRVCITRWGNYEDAYDFWNRPSYSHEEERTSTTPHSNQFVSSAGEAVTVAQ 122

Query: 686  GVVKTMAAKGYEIGKDALGKAKAIGESHQV----PTKVANLSERIGLTDKIFAGVEATRS 519
             VVKTM AKGY + KDAL KAK   ESHQV      KV+ LS RIGL++K+ AGV+A + 
Sbjct: 123  EVVKTMLAKGYVLSKDALTKAKDFDESHQVSATATAKVSELSRRIGLSEKVSAGVKAVKY 182

Query: 518  VDQRYHISGTTKSVVSATQRXXXXXXXXXXXXXXXSKGALWLSGALSKASQVAGDLGNRG 339
            VDQ Y++SGTTK+  SAT R               SKGALW+SGAL++A+QV  DLG RG
Sbjct: 183  VDQMYNVSGTTKAAASATGRSVASATSTVVNNSYFSKGALWVSGALTRAAQVTSDLGTRG 242


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