BLASTX nr result
ID: Scutellaria23_contig00000311
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Scutellaria23_contig00000311
(1729 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9LEB4.1|RBP45_NICPL RecName: Full=Polyadenylate-binding prot... 251 e-111
ref|XP_002280601.1| PREDICTED: RNA-binding post-transcriptional ... 266 e-109
emb|CAN83958.1| hypothetical protein VITISV_039907 [Vitis vinifera] 261 e-108
ref|XP_004145109.1| PREDICTED: polyadenylate-binding protein RBP... 245 e-103
ref|XP_002522953.1| nuclear acid binding protein, putative [Rici... 250 e-102
>sp|Q9LEB4.1|RBP45_NICPL RecName: Full=Polyadenylate-binding protein RBP45;
Short=Poly(A)-binding protein RBP45; AltName:
Full=RNA-binding protein 45; Short=NplRBP45
gi|9663767|emb|CAC01237.1| RNA Binding Protein 45
[Nicotiana plumbaginifolia]
Length = 409
Score = 251 bits (642), Expect(2) = e-111
Identities = 133/211 (63%), Positives = 147/211 (69%), Gaps = 4/211 (1%)
Frame = +3
Query: 705 SVKGAKVVIDRTTGRSKGYGFVKFGDEREQQRAMTEMNGVPCSXXXXXXXXXXXXXXXXX 884
SV+GAKVV DR TGRSKGYGFVKF DE EQ RAMTEMNGV CS
Sbjct: 202 SVRGAKVVTDRITGRSKGYGFVKFADESEQLRAMTEMNGVLCSTRPMRIGPAANKKPVGT 261
Query: 885 XXXXXXXXXXXXXXXXESDPNNTTIFVGGLDPNVSDDHLRQVFSQYGEIVHVKIPVGKRC 1064
ESDPNNTTIFVGGLDP V+++HLRQVFS YGE+VHVKI GKRC
Sbjct: 262 PQKATYQNPQATQG--ESDPNNTTIFVGGLDPTVAEEHLRQVFSPYGELVHVKIVAGKRC 319
Query: 1065 GFVQFSDRSSAEQALANLNGTMLGGQSVRLSWGRSPSNKPAEQNQW---XXXXXXXXQGH 1235
GFVQF R+SAEQAL++LNGT LGGQS+RLSWGRSPS+K +Q QW QG+
Sbjct: 320 GFVQFGTRASAEQALSSLNGTQLGGQSIRLSWGRSPSSKQTDQTQWGGSGGAYYGYGQGY 379
Query: 1236 EVHGGYAPP-QDPSMYYGGYPGYANYQQPQQ 1325
E + GYAPP QDP+MYYG YPGYANYQQPQQ
Sbjct: 380 EAY-GYAPPAQDPNMYYGNYPGYANYQQPQQ 409
Score = 177 bits (449), Expect(2) = e-111
Identities = 84/118 (71%), Positives = 95/118 (80%)
Frame = +1
Query: 235 YGVAPTNXXXXXXXXXXXXXRSLWIGDLQYWMDESYLTSCFYHTGELLSAKVIRNKQTGQ 414
YG T RSLWIGDLQYWMDE+YL++CFYHTGEL+SAKVIRNKQTGQ
Sbjct: 64 YGAMATTNPNPSPTGNPNEVRSLWIGDLQYWMDENYLSTCFYHTGELVSAKVIRNKQTGQ 123
Query: 415 SEGYGFLEFRTRATAENILQTYNGTMMPNAEQSFRLNWASLGSGDKRTDDSPEHTIFV 588
SEGYGFLEFR+ A AE ILQTYNGT+MPN EQ+FR+NWASLG+G++R DDS EHTIFV
Sbjct: 124 SEGYGFLEFRSHAAAETILQTYNGTLMPNVEQNFRMNWASLGAGERR-DDSAEHTIFV 180
>ref|XP_002280601.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Vitis vinifera]
Length = 417
Score = 266 bits (679), Expect(2) = e-109
Identities = 135/209 (64%), Positives = 148/209 (70%), Gaps = 2/209 (0%)
Frame = +3
Query: 705 SVKGAKVVIDRTTGRSKGYGFVKFGDEREQQRAMTEMNGVPCSXXXXXXXXXXXXXXXXX 884
SVKGAKVV DRTTGRSKGYGFV+FGDE EQ RAM EMNG+ CS
Sbjct: 209 SVKGAKVVTDRTTGRSKGYGFVRFGDEGEQLRAMNEMNGMFCSTRPMRIGPAATKKPVGG 268
Query: 885 XXXXXXXXXXXXXXXXESDPNNTTIFVGGLDPNVSDDHLRQVFSQYGEIVHVKIPVGKRC 1064
ESDPNNTTIFVGGLD NV+DD+LRQVFSQYGE+VHVKIPVGKRC
Sbjct: 269 QQFQKASFQNTQGNQGESDPNNTTIFVGGLDSNVTDDYLRQVFSQYGELVHVKIPVGKRC 328
Query: 1065 GFVQFSDRSSAEQALANLNGTMLGGQSVRLSWGRSPSNKPA--EQNQWXXXXXXXXQGHE 1238
GFVQF++R+ AEQALA LNGT LG QS+RLSWGRSPSNK A +Q QW QG+E
Sbjct: 329 GFVQFANRACAEQALAGLNGTQLGAQSIRLSWGRSPSNKQAQPDQAQWNGGYYGYAQGYE 388
Query: 1239 VHGGYAPPQDPSMYYGGYPGYANYQQPQQ 1325
+G PPQDP+MYYG YPGY NYQQPQQ
Sbjct: 389 AYGYAPPPQDPNMYYGAYPGYGNYQQPQQ 417
Score = 159 bits (402), Expect(2) = e-109
Identities = 71/98 (72%), Positives = 86/98 (87%)
Frame = +1
Query: 295 RSLWIGDLQYWMDESYLTSCFYHTGELLSAKVIRNKQTGQSEGYGFLEFRTRATAENILQ 474
RSLWIGDLQ WM+E+YL CF TGE++S KVIRNKQTGQ EGYGF+E TRA AE ILQ
Sbjct: 90 RSLWIGDLQPWMEENYLWGCFSQTGEVVSVKVIRNKQTGQCEGYGFIELATRAAAERILQ 149
Query: 475 TYNGTMMPNAEQSFRLNWASLGSGDKRTDDSPEHTIFV 588
TYNGT+MPN+EQ+FRLNWA+LG+G++R DD+P++TIFV
Sbjct: 150 TYNGTLMPNSEQNFRLNWATLGAGERRADDTPDYTIFV 187
>emb|CAN83958.1| hypothetical protein VITISV_039907 [Vitis vinifera]
Length = 410
Score = 261 bits (668), Expect(2) = e-108
Identities = 136/209 (65%), Positives = 149/209 (71%), Gaps = 2/209 (0%)
Frame = +3
Query: 705 SVKGAKVVIDRTTGRSKGYGFVKFGDEREQQRAMTEMNGVPCSXXXXXXXXXXXXXXXXX 884
SVKGAKVV DRTTGRSKGYGFV+FGDE EQ RAM EMNG+ CS
Sbjct: 194 SVKGAKVVTDRTTGRSKGYGFVRFGDEGEQLRAMNEMNGMFCSTRPMRIGPAATKKPVGA 253
Query: 885 XXXXXXXXXXXXXXXXESDPNNTTIFVGGLDPNVSDDHLRQVFSQYGEIVHVKIPVGKRC 1064
ESDPNNTTIFVGGLD NV+DD+LRQVFSQYGE+VHVKIPVGKRC
Sbjct: 254 SFQNTQGXQG------ESDPNNTTIFVGGLDSNVTDDYLRQVFSQYGELVHVKIPVGKRC 307
Query: 1065 GFVQFSDRSSAEQALANLNGTMLGGQSVRLSWGRSPSNKPA--EQNQWXXXXXXXXQGHE 1238
GFVQF++R+ AEQALA LNGT LG QS+RLSWGRSPSNK A +Q QW QG+E
Sbjct: 308 GFVQFANRACAEQALAGLNGTQLGAQSIRLSWGRSPSNKQAQPDQAQWNGGYYGYAQGYE 367
Query: 1239 VHGGYAPPQDPSMYYGGYPGYANYQQPQQ 1325
+G PPQDP+MYYG YPGY NYQQPQQ
Sbjct: 368 AYGYAPPPQDPNMYYGAYPGYGNYQQPQQ 396
Score = 157 bits (397), Expect(2) = e-108
Identities = 70/98 (71%), Positives = 85/98 (86%)
Frame = +1
Query: 295 RSLWIGDLQYWMDESYLTSCFYHTGELLSAKVIRNKQTGQSEGYGFLEFRTRATAENILQ 474
RSLWIGDLQ WM+E+Y CF TGE++S KVIRNKQTGQ EGYGF+E TRA AE ILQ
Sbjct: 75 RSLWIGDLQPWMEENYXWGCFSQTGEVVSVKVIRNKQTGQCEGYGFIELATRAAAERILQ 134
Query: 475 TYNGTMMPNAEQSFRLNWASLGSGDKRTDDSPEHTIFV 588
TYNGT+MPN+EQ+FRLNWA+LG+G++R DD+P++TIFV
Sbjct: 135 TYNGTLMPNSEQNFRLNWATLGAGERRADDTPDYTIFV 172
>ref|XP_004145109.1| PREDICTED: polyadenylate-binding protein RBP45B-like [Cucumis
sativus]
Length = 404
Score = 245 bits (626), Expect(2) = e-103
Identities = 129/209 (61%), Positives = 145/209 (69%), Gaps = 4/209 (1%)
Frame = +3
Query: 705 SVKGAKVVIDRTTGRSKGYGFVKFGDEREQQRAMTEMNGVPCSXXXXXXXXXXXXXXXXX 884
SVKGAKVVIDR TGR+KGYGFVKFGDE EQ RAMTEMNGV CS
Sbjct: 183 SVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTSGG 242
Query: 885 XXXXXXXXXXXXXXXXESDPNNTTIFVGGLDPNVSDDHLRQVFSQYGEIVHVKIPVGKRC 1064
E+DPNNTTIFVG LD NV+D+HLRQVF QYGE+VHVKIPVGKRC
Sbjct: 243 QQFSKTSYQNPQGAQNENDPNNTTIFVGNLDANVTDEHLRQVFGQYGELVHVKIPVGKRC 302
Query: 1065 GFVQFSDRSSAEQALANLNGTMLGGQSVRLSWGRSPSNK--PAEQNQW-XXXXXXXXQGH 1235
GFVQF+DR+ AE+AL LNGT +GGQ++RLSWGRSPSNK A+ NQW QG+
Sbjct: 303 GFVQFADRNCAEEALRVLNGTQIGGQNIRLSWGRSPSNKQPQADPNQWNGGGYYGYGQGY 362
Query: 1236 EVHGGYAP-PQDPSMYYGGYPGYANYQQP 1319
E + YAP PQDP+M+Y GY GY NYQQP
Sbjct: 363 ENY-SYAPAPQDPNMFYSGYGGYGNYQQP 390
Score = 157 bits (396), Expect(2) = e-103
Identities = 72/98 (73%), Positives = 84/98 (85%)
Frame = +1
Query: 295 RSLWIGDLQYWMDESYLTSCFYHTGELLSAKVIRNKQTGQSEGYGFLEFRTRATAENILQ 474
R+LWIGDLQYWMDE+Y+ +CF HTGE+ S KVIRNKQTGQSEGYGF+EF TR AE +LQ
Sbjct: 66 RTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERVLQ 125
Query: 475 TYNGTMMPNAEQSFRLNWASLGSGDKRTDDSPEHTIFV 588
TYNGT MPN Q+FRLNWAS +G+KR DDSP++TIFV
Sbjct: 126 TYNGTAMPNGAQNFRLNWAS--AGEKRQDDSPDYTIFV 161
>ref|XP_002522953.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223537765|gb|EEF39383.1| nuclear acid binding protein,
putative [Ricinus communis]
Length = 404
Score = 250 bits (639), Expect(2) = e-102
Identities = 127/207 (61%), Positives = 145/207 (70%), Gaps = 2/207 (0%)
Frame = +3
Query: 705 SVKGAKVVIDRTTGRSKGYGFVKFGDEREQQRAMTEMNGVPCSXXXXXXXXXXXXXXXXX 884
SVKGAKVV DR TGR+KGYGFV+FGDE EQ+RAM EMNG CS
Sbjct: 185 SVKGAKVVTDRLTGRTKGYGFVRFGDENEQRRAMVEMNGQYCS-TRAMRIGPAATKKPAV 243
Query: 885 XXXXXXXXXXXXXXXXESDPNNTTIFVGGLDPNVSDDHLRQVFSQYGEIVHVKIPVGKRC 1064
E+DPNNTTIFVG LDP+VSD+HLRQVF +YGE+VHVKIP GKRC
Sbjct: 244 QQYQKAPYQSTQGTQGENDPNNTTIFVGALDPSVSDEHLRQVFGKYGELVHVKIPAGKRC 303
Query: 1065 GFVQFSDRSSAEQALANLNGTMLGGQSVRLSWGRSPSNKPA--EQNQWXXXXXXXXQGHE 1238
GFVQF++R+ AEQAL LNGT L GQS+RLSWGRSPSNK A +Q+QW QG++
Sbjct: 304 GFVQFANRACAEQALLGLNGTQLAGQSIRLSWGRSPSNKQAQPDQSQWNGGYYGYAQGYD 363
Query: 1239 VHGGYAPPQDPSMYYGGYPGYANYQQP 1319
+ GYAPPQDP+MYY GYPGY NYQQP
Sbjct: 364 AY-GYAPPQDPNMYYSGYPGYGNYQQP 389
Score = 150 bits (379), Expect(2) = e-102
Identities = 68/98 (69%), Positives = 81/98 (82%)
Frame = +1
Query: 295 RSLWIGDLQYWMDESYLTSCFYHTGELLSAKVIRNKQTGQSEGYGFLEFRTRATAENILQ 474
+SLWIGDLQ WMDE YL + F TGE++SAKVIRNKQTG EGYGF+EF RA AE ILQ
Sbjct: 66 KSLWIGDLQQWMDEGYLFNIFSGTGEVVSAKVIRNKQTGMPEGYGFIEFINRAAAERILQ 125
Query: 475 TYNGTMMPNAEQSFRLNWASLGSGDKRTDDSPEHTIFV 588
TYNGT MPN EQ+FRLNWA+L +G++R DD P++T+FV
Sbjct: 126 TYNGTQMPNTEQNFRLNWATLAAGERRQDDGPDYTVFV 163