BLASTX nr result

ID: Scutellaria23_contig00000263 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00000263
         (748 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK39810.1| unknown [Lotus japonicus] gi|388512023|gb|AFK4407...   198   1e-48
ref|XP_002529952.1| Photosystem II 10 kDa polypeptide, chloropla...   191   1e-46
gb|AAQ24852.1| 10 kDa photosystem II polypeptide [Trifolium prat...   191   2e-46
gb|ABI14811.1| chloroplast photosystem II light-inducible protei...   186   3e-45
ref|NP_001235442.1| uncharacterized protein LOC100499745 [Glycin...   186   4e-45

>gb|AFK39810.1| unknown [Lotus japonicus] gi|388512023|gb|AFK44073.1| unknown
           [Lotus japonicus]
          Length = 139

 Score =  198 bits (503), Expect = 1e-48
 Identities = 104/139 (74%), Positives = 116/139 (83%), Gaps = 7/139 (5%)
 Frame = +3

Query: 123 MASTVMMSSVTLKPS------SAVRGLPSLARTT-TFRVQASGVKKIKTDTPYGTGGGMD 281
           MAS+VM +SV+LKP+      S+VRGLPSL+R++ +FRV ASG KKIKTDTPYGTGGGM+
Sbjct: 1   MASSVM-ASVSLKPAGFSLEKSSVRGLPSLSRSSASFRVVASGGKKIKTDTPYGTGGGMN 59

Query: 282 LRNGVDASGRKPTGKGVYQFVDKYGANVDGYSPIYDEKDWSPTGDVYAGGTTGLAIWAVT 461
           LRNGVDASGRKP GKGVYQ+VDKYGANVDGYSPIYD KDWSPTGDVYAGGTTGLAIWAVT
Sbjct: 60  LRNGVDASGRKPRGKGVYQYVDKYGANVDGYSPIYDTKDWSPTGDVYAGGTTGLAIWAVT 119

Query: 462 XXXXXXXXXXXVYNTSALA 518
                      VYNTSAL+
Sbjct: 120 LLGLLAGGALLVYNTSALS 138


>ref|XP_002529952.1| Photosystem II 10 kDa polypeptide, chloroplast precursor, putative
           [Ricinus communis] gi|223530550|gb|EEF32429.1|
           Photosystem II 10 kDa polypeptide, chloroplast
           precursor, putative [Ricinus communis]
          Length = 138

 Score =  191 bits (486), Expect = 1e-46
 Identities = 100/139 (71%), Positives = 112/139 (80%), Gaps = 7/139 (5%)
 Frame = +3

Query: 123 MASTVMMSSVTLKPS-------SAVRGLPSLARTTTFRVQASGVKKIKTDTPYGTGGGMD 281
           MAS+VM +SV+LKPS       S+VRGLP+L+R T FR++ASG KKIKTD PYG GGGM+
Sbjct: 1   MASSVM-ASVSLKPSPFTVQKSSSVRGLPTLSRRT-FRIEASGGKKIKTDKPYGIGGGME 58

Query: 282 LRNGVDASGRKPTGKGVYQFVDKYGANVDGYSPIYDEKDWSPTGDVYAGGTTGLAIWAVT 461
           LRNGVDASGRKPTGKGVYQFVDKYGANVDGYSPIY+  +WSPTGDVYAGG TGLAIWA+T
Sbjct: 59  LRNGVDASGRKPTGKGVYQFVDKYGANVDGYSPIYNTDEWSPTGDVYAGGATGLAIWAIT 118

Query: 462 XXXXXXXXXXXVYNTSALA 518
                      VYNTSALA
Sbjct: 119 LAGLLAGGALLVYNTSALA 137


>gb|AAQ24852.1| 10 kDa photosystem II polypeptide [Trifolium pratense]
          Length = 136

 Score =  191 bits (484), Expect = 2e-46
 Identities = 101/138 (73%), Positives = 111/138 (80%), Gaps = 6/138 (4%)
 Frame = +3

Query: 123 MASTVMMSSVTLKPS------SAVRGLPSLARTTTFRVQASGVKKIKTDTPYGTGGGMDL 284
           MAS+VM +SV+LKP+      S+VRGLP+L+R   FRV ASGVKKIKTDTPYGTGGGMDL
Sbjct: 1   MASSVM-ASVSLKPTPFMVEKSSVRGLPNLSRP--FRVVASGVKKIKTDTPYGTGGGMDL 57

Query: 285 RNGVDASGRKPTGKGVYQFVDKYGANVDGYSPIYDEKDWSPTGDVYAGGTTGLAIWAVTX 464
            NG+DASGRK  GKGVYQFVDKYGANVDGYSPIY+ KDWSPTGDVY GGTTGLAIWAVT 
Sbjct: 58  PNGLDASGRKQKGKGVYQFVDKYGANVDGYSPIYEPKDWSPTGDVYTGGTTGLAIWAVTL 117

Query: 465 XXXXXXXXXXVYNTSALA 518
                     VYNTSAL+
Sbjct: 118 AGLLAGGALLVYNTSALS 135


>gb|ABI14811.1| chloroplast photosystem II light-inducible protein [Pachysandra
           terminalis]
          Length = 138

 Score =  186 bits (473), Expect = 3e-45
 Identities = 94/136 (69%), Positives = 109/136 (80%), Gaps = 6/136 (4%)
 Frame = +3

Query: 129 STVMMSSVTLKPS-----SAVRGLPSLAR-TTTFRVQASGVKKIKTDTPYGTGGGMDLRN 290
           +T +MSS++LK S     SA RGLPSLAR +++FRV+ASGVKKIKTD PYGTGGGM LR+
Sbjct: 2   ATSVMSSLSLKASPFLEKSAARGLPSLARPSSSFRVEASGVKKIKTDKPYGTGGGMSLRD 61

Query: 291 GVDASGRKPTGKGVYQFVDKYGANVDGYSPIYDEKDWSPTGDVYAGGTTGLAIWAVTXXX 470
           G+DASGRKP GKGVYQFVDKYGANVDGYSPIYD+ DWSP+G VY GGTTGL +WA+T   
Sbjct: 62  GLDASGRKPKGKGVYQFVDKYGANVDGYSPIYDQXDWSPSGAVYVGGTTGLLVWAITLAA 121

Query: 471 XXXXXXXXVYNTSALA 518
                   VYNTSAL+
Sbjct: 122 LLLGGALLVYNTSALS 137


>ref|NP_001235442.1| uncharacterized protein LOC100499745 [Glycine max]
           gi|255626243|gb|ACU13466.1| unknown [Glycine max]
          Length = 139

 Score =  186 bits (472), Expect = 4e-45
 Identities = 101/139 (72%), Positives = 109/139 (78%), Gaps = 7/139 (5%)
 Frame = +3

Query: 123 MASTVMMSSVTLKPS------SAVRGLPSLAR-TTTFRVQASGVKKIKTDTPYGTGGGMD 281
           MAS+VM +SV LKP+      S+VRGLPSL+R +++FRV ASG KKIKTD PYG  GGM 
Sbjct: 1   MASSVM-ASVALKPAPFTVEKSSVRGLPSLSRNSSSFRVVASGGKKIKTDKPYGINGGMA 59

Query: 282 LRNGVDASGRKPTGKGVYQFVDKYGANVDGYSPIYDEKDWSPTGDVYAGGTTGLAIWAVT 461
           LR GVDASGRK  GKGVYQFVDKYGANVDGYSPIYD KDWSPTGDVYAGGTTGLAIWAVT
Sbjct: 60  LREGVDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSPTGDVYAGGTTGLAIWAVT 119

Query: 462 XXXXXXXXXXXVYNTSALA 518
                      VYNTSALA
Sbjct: 120 LLGLLAGGALLVYNTSALA 138


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