BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00000218
         (1133 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   227   4e-62
ref|XP_004137828.1| PREDICTED: 29 kDa ribonucleoprotein, chlorop...   229   1e-58
ref|XP_002323470.1| predicted protein [Populus trichocarpa] gi|2...   222   9e-58
gb|AAM66970.1| putative RNA-binding protein [Arabidopsis thaliana]    214   3e-57
ref|XP_002519525.1| ribonucleoprotein, chloroplast, putative [Ri...   220   8e-57

>ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic isoform 1 [Vitis
           vinifera]
          Length = 288

 Score =  227 bits (579), Expect(2) = 4e-62
 Identities = 121/192 (63%), Positives = 136/192 (70%), Gaps = 12/192 (6%)
 Frame = -3

Query: 909 FVGNLPFTVDSAVLAGLFQQVGTVEKVEVIYDKFTGRSRGFGFVTMATVXXXXXXXXQFN 730
           FVGNLPF VDSA LAGLF+Q G VE VEVIYDK TGRSRGFGFVTM+TV        QFN
Sbjct: 93  FVGNLPFNVDSAGLAGLFEQAGNVEMVEVIYDKITGRSRGFGFVTMSTVEEVEAAAQQFN 152

Query: 729 GYELEGRVLRVNCGPPPAKXXXXXXXXXXXXXXRP------------MDNSNKLHVGNLS 586
           GYELEGR LRVN GPPPA+                            ++++N+++VGNLS
Sbjct: 153 GYELEGRQLRVNSGPPPARRENSNFRGENSNFRGENTNFRGPRGGANLNSTNRIYVGNLS 212

Query: 585 WGVDNLALETLFSEHGNVKEARVVYDRENGRSRGFGFVTYSSPEEVNNAIEELDGADLDG 406
           WGVD+LALETLFSE G V EARV+YDRE GRSRGFGFVTY+S EEVN AIE LDG DL+G
Sbjct: 213 WGVDDLALETLFSEQGKVTEARVIYDRETGRSRGFGFVTYNSAEEVNRAIESLDGVDLNG 272

Query: 405 RPIRVSPAGDRP 370
           R IRV+ A  RP
Sbjct: 273 RSIRVTMAEARP 284



 Score = 38.5 bits (88), Expect(2) = 4e-62
 Identities = 18/35 (51%), Positives = 26/35 (74%)
 Frame = -1

Query: 1094 SRFIKNVAFSSEVEEDENIDFGGEKEPVFSPELNV 990
            SRF++NVA SS+ E+DE++    E EP FSP+L +
Sbjct: 59   SRFVRNVAVSSDYEQDEDV-LSDEGEPSFSPDLKL 92



 Score = 78.6 bits (192), Expect = 3e-12
 Identities = 38/74 (51%), Positives = 52/74 (70%)
 Frame = -3

Query: 609 KLHVGNLSWGVDNLALETLFSEHGNVKEARVVYDRENGRSRGFGFVTYSSPEEVNNAIEE 430
           KL VGNL + VD+  L  LF + GNV+   V+YD+  GRSRGFGFVT S+ EEV  A ++
Sbjct: 91  KLFVGNLPFNVDSAGLAGLFEQAGNVEMVEVIYDKITGRSRGFGFVTMSTVEEVEAAAQQ 150

Query: 429 LDGADLDGRPIRVS 388
            +G +L+GR +RV+
Sbjct: 151 FNGYELEGRQLRVN 164


>ref|XP_004137828.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like [Cucumis
           sativus] gi|449483348|ref|XP_004156563.1| PREDICTED: 29
           kDa ribonucleoprotein, chloroplastic-like [Cucumis
           sativus]
          Length = 278

 Score =  229 bits (585), Expect(2) = 1e-58
 Identities = 118/180 (65%), Positives = 134/180 (74%)
 Frame = -3

Query: 909 FVGNLPFTVDSAVLAGLFQQVGTVEKVEVIYDKFTGRSRGFGFVTMATVXXXXXXXXQFN 730
           FVGNLPFTVDSA LAGLF+  G VE+VEVIYDK TGRSRGFGFVTM+TV        QFN
Sbjct: 96  FVGNLPFTVDSAQLAGLFESAGQVERVEVIYDKTTGRSRGFGFVTMSTVGEVEAAAQQFN 155

Query: 729 GYELEGRVLRVNCGPPPAKXXXXXXXXXXXXXXRPMDNSNKLHVGNLSWGVDNLALETLF 550
           GYEL+GR+LRVN GPPP K                 DN N++HV NL+WGVD+L LE LF
Sbjct: 156 GYELDGRLLRVNYGPPPPKRDDSSFRGSRNASR--FDNRNRVHVSNLAWGVDDLTLENLF 213

Query: 549 SEHGNVKEARVVYDRENGRSRGFGFVTYSSPEEVNNAIEELDGADLDGRPIRVSPAGDRP 370
            E GNV EA+VVYDR++G+SRGFGFVTY+S EEVN AI+ LDG DLDGRPIRV+ A  RP
Sbjct: 214 REKGNVLEAKVVYDRDSGKSRGFGFVTYNSAEEVNEAIQSLDGVDLDGRPIRVTQAEARP 273



 Score = 24.6 bits (52), Expect(2) = 1e-58
 Identities = 12/36 (33%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
 Frame = -1

Query: 1094 SRFIKNVAFSSEV-EEDENIDFGGEKEPVFSPELNV 990
            SRF++NVA SS+  +E+  ++  G+ +  ++P+L +
Sbjct: 61   SRFVRNVAVSSDYGQEEGTLEVDGD-DSSYAPDLKL 95



 Score = 73.9 bits (180), Expect = 7e-11
 Identities = 37/74 (50%), Positives = 49/74 (66%)
 Frame = -3

Query: 609 KLHVGNLSWGVDNLALETLFSEHGNVKEARVVYDRENGRSRGFGFVTYSSPEEVNNAIEE 430
           KL VGNL + VD+  L  LF   G V+   V+YD+  GRSRGFGFVT S+  EV  A ++
Sbjct: 94  KLFVGNLPFTVDSAQLAGLFESAGQVERVEVIYDKTTGRSRGFGFVTMSTVGEVEAAAQQ 153

Query: 429 LDGADLDGRPIRVS 388
            +G +LDGR +RV+
Sbjct: 154 FNGYELDGRLLRVN 167


>ref|XP_002323470.1| predicted protein [Populus trichocarpa] gi|222868100|gb|EEF05231.1|
           predicted protein [Populus trichocarpa]
          Length = 273

 Score =  222 bits (566), Expect(2) = 9e-58
 Identities = 116/180 (64%), Positives = 132/180 (73%)
 Frame = -3

Query: 909 FVGNLPFTVDSAVLAGLFQQVGTVEKVEVIYDKFTGRSRGFGFVTMATVXXXXXXXXQFN 730
           FVGNLPF VDSA LAGLF+  G VE VEVIYDK TGRSRGFGFVTM T+        QFN
Sbjct: 93  FVGNLPFNVDSARLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMTTIEEVEAASKQFN 152

Query: 729 GYELEGRVLRVNCGPPPAKXXXXXXXXXXXXXXRPMDNSNKLHVGNLSWGVDNLALETLF 550
           GYEL+GR LRVN GPPP K                 D+ N+++VGNLSW VDNLALETLF
Sbjct: 153 GYELDGRTLRVNFGPPPQKESSFSRGPRGGET---FDSGNRVYVGNLSWNVDNLALETLF 209

Query: 549 SEHGNVKEARVVYDRENGRSRGFGFVTYSSPEEVNNAIEELDGADLDGRPIRVSPAGDRP 370
            E G V +A+VVYDR++GRSRGFGFVTYSS EEV+NAI+ L+GA+LDGR IRVS A  +P
Sbjct: 210 REKGRVMDAKVVYDRDSGRSRGFGFVTYSSAEEVDNAIDSLNGAELDGRAIRVSVAEAKP 269



 Score = 28.9 bits (63), Expect(2) = 9e-58
 Identities = 16/35 (45%), Positives = 23/35 (65%)
 Frame = -1

Query: 1094 SRFIKNVAFSSEVEEDENIDFGGEKEPVFSPELNV 990
            SRF+KNVA SSE  ++E+    G+ E  FS +L +
Sbjct: 59   SRFLKNVAISSEFGQEEDFLSDGD-EQSFSQDLKL 92



 Score = 76.6 bits (187), Expect = 1e-11
 Identities = 38/74 (51%), Positives = 51/74 (68%)
 Frame = -3

Query: 609 KLHVGNLSWGVDNLALETLFSEHGNVKEARVVYDRENGRSRGFGFVTYSSPEEVNNAIEE 430
           KL VGNL + VD+  L  LF   GNV+   V+YD+  GRSRGFGFVT ++ EEV  A ++
Sbjct: 91  KLFVGNLPFNVDSARLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMTTIEEVEAASKQ 150

Query: 429 LDGADLDGRPIRVS 388
            +G +LDGR +RV+
Sbjct: 151 FNGYELDGRTLRVN 164


>gb|AAM66970.1| putative RNA-binding protein [Arabidopsis thaliana]
          Length = 289

 Score =  214 bits (546), Expect(2) = 3e-57
 Identities = 114/191 (59%), Positives = 131/191 (68%), Gaps = 11/191 (5%)
 Frame = -3

Query: 909 FVGNLPFTVDSAVLAGLFQQVGTVEKVEVIYDKFTGRSRGFGFVTMATVXXXXXXXXQFN 730
           FVGNLPF VDSA LA LF+  G VE VEVIYDK TGRSRGFGFVTM++V        QFN
Sbjct: 94  FVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQFN 153

Query: 729 GYELEGRVLRVNCGPPPAKXXXXXXXXXXXXXXRP-----------MDNSNKLHVGNLSW 583
           GYEL+GR LRVN GPPP K                             + N+++VGNLSW
Sbjct: 154 GYELDGRPLRVNAGPPPPKREDGFSRGPRSSFGSSGSGYGGGGGSGAGSGNRVYVGNLSW 213

Query: 582 GVDNLALETLFSEHGNVKEARVVYDRENGRSRGFGFVTYSSPEEVNNAIEELDGADLDGR 403
           GVD++ALE+LFSE G V EARV+YDR++GRS+GFGFVTY S +EV NAI+ LDGADLDGR
Sbjct: 214 GVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKSLDGADLDGR 273

Query: 402 PIRVSPAGDRP 370
            IRVS A  RP
Sbjct: 274 QIRVSEAEARP 284



 Score = 34.7 bits (78), Expect(2) = 3e-57
 Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
 Frame = -1

Query: 1124 SPVTNYGHPISRFIKNVAFSS--EVEEDENIDFGGEKEPVFSPELNV 990
            S    +  P SRF++NVA +S  EVEED   D    KE  FS +L +
Sbjct: 47   SIAAKWNSPASRFVRNVAITSEFEVEEDGFADVAPPKEQSFSADLKL 93



 Score = 82.4 bits (202), Expect = 2e-13
 Identities = 43/80 (53%), Positives = 54/80 (67%)
 Frame = -3

Query: 609 KLHVGNLSWGVDNLALETLFSEHGNVKEARVVYDRENGRSRGFGFVTYSSPEEVNNAIEE 430
           KL VGNL + VD+  L  LF   GNV+   V+YD+  GRSRGFGFVT SS  EV  A ++
Sbjct: 92  KLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQ 151

Query: 429 LDGADLDGRPIRVSPAGDRP 370
            +G +LDGRP+RV+ AG  P
Sbjct: 152 FNGYELDGRPLRVN-AGPPP 170


>ref|XP_002519525.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
           gi|223541388|gb|EEF42939.1| ribonucleoprotein,
           chloroplast, putative [Ricinus communis]
          Length = 280

 Score =  220 bits (561), Expect(2) = 8e-57
 Identities = 116/182 (63%), Positives = 132/182 (72%), Gaps = 2/182 (1%)
 Frame = -3

Query: 909 FVGNLPFTVDSAVLAGLFQQVGTVEKVEVIYDKFTGRSRGFGFVTMATVXXXXXXXXQFN 730
           FVGNLPF VDSA LAGLF+  G VE VEVIYDK TGRSRGFGFVTM+++        QFN
Sbjct: 95  FVGNLPFNVDSAQLAGLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSSIDEVEAAAQQFN 154

Query: 729 GYELEGRVLRVNCGPPPAKXXXXXXXXXXXXXXRPMDN--SNKLHVGNLSWGVDNLALET 556
           GYELEGR LRVN GPPP +                 ++   N+L+VGNLSW VDNLALE+
Sbjct: 155 GYELEGRALRVNSGPPPQRESSFSRSPRFGGGGGGGESLEGNRLYVGNLSWSVDNLALES 214

Query: 555 LFSEHGNVKEARVVYDRENGRSRGFGFVTYSSPEEVNNAIEELDGADLDGRPIRVSPAGD 376
            FSE G V +A+VVYDRE+GRSRGFGFVTYSS EEV NAI+ L+GA+LDGR IRVS A  
Sbjct: 215 FFSEQGKVVDAKVVYDRESGRSRGFGFVTYSSAEEVENAIDSLNGAELDGRAIRVSVAEA 274

Query: 375 RP 370
           RP
Sbjct: 275 RP 276



 Score = 27.7 bits (60), Expect(2) = 8e-57
 Identities = 14/35 (40%), Positives = 23/35 (65%)
 Frame = -1

Query: 1094 SRFIKNVAFSSEVEEDENIDFGGEKEPVFSPELNV 990
            SRF+ +VA SSE  ++E++   G+ E  FS +L +
Sbjct: 61   SRFVPSVAISSEFGQEEDVSSDGD-ESSFSQDLKL 94



 Score = 77.4 bits (189), Expect = 6e-12
 Identities = 38/74 (51%), Positives = 51/74 (68%)
 Frame = -3

Query: 609 KLHVGNLSWGVDNLALETLFSEHGNVKEARVVYDRENGRSRGFGFVTYSSPEEVNNAIEE 430
           KL VGNL + VD+  L  LF   GNV+   V+YD+  GRSRGFGFVT SS +EV  A ++
Sbjct: 93  KLFVGNLPFNVDSAQLAGLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSSIDEVEAAAQQ 152

Query: 429 LDGADLDGRPIRVS 388
            +G +L+GR +RV+
Sbjct: 153 FNGYELEGRALRVN 166