BLASTX nr result

ID: Scutellaria23_contig00000204 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00000204
         (896 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAJ38371.1| HMG-protein [Plantago major]                          157   2e-36
gb|AFK49192.1| unknown [Lotus japonicus]                              127   4e-27
ref|XP_002279947.2| PREDICTED: high mobility group B protein 1-l...   126   6e-27
dbj|BAJ33790.1| unnamed protein product [Thellungiella halophila]     123   5e-26
gb|AEV43366.1| group B HMG-box protein [Citrus sinensis]              122   1e-25

>emb|CAJ38371.1| HMG-protein [Plantago major]
          Length = 212

 Score =  157 bits (398), Expect = 2e-36
 Identities = 92/150 (61%), Positives = 98/150 (65%), Gaps = 4/150 (2%)
 Frame = +2

Query: 89  LLDMKTGSRSKVATRKETKQVLKPVDDRKVGKRKAA--PXXXXXXXXXXXXXXXXXXXXX 262
           LL+MKTG RSK A RKET   LKPVDDRKVGKRKAA  P                     
Sbjct: 44  LLEMKTGGRSKAAVRKET---LKPVDDRKVGKRKAAAAPKVKKPAAKKDKKAKKDPNKPK 100

Query: 263 XXXXAFFVFLEEFRKTFKKENPNIKAVSAVGKAGGEKWKSMTXXXXXXXXXXXXXRKVEY 442
               AFFVFLEEFR+TFKKENPNIKAVSAVGKAGGEKWKS+T             RK EY
Sbjct: 101 RPPSAFFVFLEEFRQTFKKENPNIKAVSAVGKAGGEKWKSLTDAEKAPYEAKAAKRKSEY 160

Query: 443 GKLMNAYNKKQQESS--ADEGSEKSASEIH 526
            KLMNAYNKKQ+ S+  ADEGSEKS SE+H
Sbjct: 161 EKLMNAYNKKQESSADEADEGSEKSRSEVH 190


>gb|AFK49192.1| unknown [Lotus japonicus]
          Length = 173

 Score =  127 bits (319), Expect = 4e-27
 Identities = 71/133 (53%), Positives = 81/133 (60%), Gaps = 2/133 (1%)
 Frame = +2

Query: 134 KETKQVLKPVDDRKVGKRKAAPXXXXXXXXXXXXXXXXXXXXXXXXXAFFVFLEEFRKTF 313
           K +K+VLKPVDDRKVGKRKAA                          AFFVFLE+FRKTF
Sbjct: 9   KTSKEVLKPVDDRKVGKRKAAVKPDKGTAGKAKKAKKDPNKPKRPPSAFFVFLEDFRKTF 68

Query: 314 KKENPNIKAVSAVGKAGGEKWKSMTXXXXXXXXXXXXXRKVEYGKLMNAYNKKQQESS-- 487
           K ENPN+K VSAVGKAGGEKWKS+T             RK EY KL+NAYN KQ  ++  
Sbjct: 69  KAENPNVKGVSAVGKAGGEKWKSLTKAEKAPYEAKAAKRKAEYEKLINAYNNKQASTADD 128

Query: 488 ADEGSEKSASEIH 526
            DE S+KS SEI+
Sbjct: 129 VDEESDKSKSEIN 141


>ref|XP_002279947.2| PREDICTED: high mobility group B protein 1-like [Vitis vinifera]
           gi|147815135|emb|CAN74566.1| hypothetical protein
           VITISV_023651 [Vitis vinifera]
           gi|297740214|emb|CBI30396.3| unnamed protein product
           [Vitis vinifera]
          Length = 168

 Score =  126 bits (317), Expect = 6e-27
 Identities = 69/137 (50%), Positives = 85/137 (62%), Gaps = 3/137 (2%)
 Frame = +2

Query: 110 SRSKVATRKETKQVLKPVDDRKVGKRKAA---PXXXXXXXXXXXXXXXXXXXXXXXXXAF 280
           ++ K A R++TK+ LKP +DRK+GKRKAA                             AF
Sbjct: 4   AKGKGAARRDTKEALKPAEDRKIGKRKAAVKAEKSSKRATTKDKKAKKDPNKPKRPPSAF 63

Query: 281 FVFLEEFRKTFKKENPNIKAVSAVGKAGGEKWKSMTXXXXXXXXXXXXXRKVEYGKLMNA 460
           FVFLEEFRK FKKENPN+KAVSAVGKAGGE+WKS++             +K EY K+MNA
Sbjct: 64  FVFLEEFRKVFKKENPNVKAVSAVGKAGGERWKSLSEAEKAPYEAKAAKKKAEYEKIMNA 123

Query: 461 YNKKQQESSADEGSEKS 511
           YNKK QES+AD+G E+S
Sbjct: 124 YNKK-QESTADDGDEES 139


>dbj|BAJ33790.1| unnamed protein product [Thellungiella halophila]
          Length = 185

 Score =  123 bits (309), Expect = 5e-26
 Identities = 76/145 (52%), Positives = 87/145 (60%), Gaps = 2/145 (1%)
 Frame = +2

Query: 98  MKTGS-RSKVATRKETKQVLKPVDDRKVGKRKA-APXXXXXXXXXXXXXXXXXXXXXXXX 271
           MKT   + KV T KET   LKPVDDRKVGKRKA A                         
Sbjct: 1   MKTAKGKDKVKTTKET---LKPVDDRKVGKRKAPAAKATKRETRKEKRAKKDPNKPKRAP 57

Query: 272 XAFFVFLEEFRKTFKKENPNIKAVSAVGKAGGEKWKSMTXXXXXXXXXXXXXRKVEYGKL 451
            AFFVFLE+FR+TFKKENPN+KAVSAVGKAGG+KWKSM+             RK EY KL
Sbjct: 58  SAFFVFLEDFRQTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKL 117

Query: 452 MNAYNKKQQESSADEGSEKSASEIH 526
           M+AYNK  +E S  + SEKS SE++
Sbjct: 118 MDAYNKNMEEGS--DESEKSRSEVN 140


>gb|AEV43366.1| group B HMG-box protein [Citrus sinensis]
          Length = 165

 Score =  122 bits (305), Expect = 1e-25
 Identities = 69/144 (47%), Positives = 85/144 (59%), Gaps = 5/144 (3%)
 Frame = +2

Query: 110 SRSKVATRKETKQVLKPVDDRKVGKRKA---APXXXXXXXXXXXXXXXXXXXXXXXXXAF 280
           +R K A +K+  +V+KPV+DR  GKRKA   A                          AF
Sbjct: 4   TRGKGAVKKDKNEVVKPVEDRAAGKRKAVLKASRSSNKRTKNVKSAKKDPNKPKRPPSAF 63

Query: 281 FVFLEEFRKTFKKENPNIKAVSAVGKAGGEKWKSMTXXXXXXXXXXXXXRKVEYGKLMNA 460
           FVFLEEFRK +K+E+PN+KAVSAVGKAGGEKWKS+T             RK++Y KLM A
Sbjct: 64  FVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEKLMTA 123

Query: 461 YNKKQQ--ESSADEGSEKSASEIH 526
           YNKKQ+  E   +E SEKS SE+H
Sbjct: 124 YNKKQESTEDEDEEESEKSKSEVH 147


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