BLASTX nr result

ID: Scutellaria23_contig00000123 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00000123
         (244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004145734.1| PREDICTED: chlorophyll a-b binding protein, ...   171   6e-41
gb|AFK40204.1| unknown [Lotus japonicus]                              171   6e-41
gb|ABF17940.1| putative chloroplast chlorophyll a/b-binding prot...   171   6e-41
ref|XP_002316737.1| light-harvesting complex II protein Lhcb1 [P...   170   1e-40
gb|AFW90565.1| chlorophyll a-b binding protein 3C-like mRNA [Sol...   169   2e-40

>ref|XP_004145734.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
           [Cucumis sativus] gi|449525484|ref|XP_004169747.1|
           PREDICTED: chlorophyll a-b binding protein,
           chloroplastic-like [Cucumis sativus]
          Length = 267

 Score =  171 bits (433), Expect = 6e-41
 Identities = 77/81 (95%), Positives = 79/81 (97%)
 Frame = -1

Query: 244 KSKPASSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFSKNRELE 65
           K KP SSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETF+KNRELE
Sbjct: 41  KPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE 100

Query: 64  VIHSRWAMLGALGCVFPELLA 2
           VIHSRWAMLGALGCVFPELL+
Sbjct: 101 VIHSRWAMLGALGCVFPELLS 121


>gb|AFK40204.1| unknown [Lotus japonicus]
          Length = 202

 Score =  171 bits (433), Expect = 6e-41
 Identities = 78/81 (96%), Positives = 79/81 (97%)
 Frame = -1

Query: 244 KSKPASSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFSKNRELE 65
           KSKP SSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETF+KNRELE
Sbjct: 38  KSKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE 97

Query: 64  VIHSRWAMLGALGCVFPELLA 2
           VIHSRWAMLGALGCVFPELLA
Sbjct: 98  VIHSRWAMLGALGCVFPELLA 118


>gb|ABF17940.1| putative chloroplast chlorophyll a/b-binding protein [Carya
           cathayensis]
          Length = 267

 Score =  171 bits (433), Expect = 6e-41
 Identities = 77/81 (95%), Positives = 79/81 (97%)
 Frame = -1

Query: 244 KSKPASSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFSKNRELE 65
           + KP SSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETF+KNRELE
Sbjct: 41  RPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE 100

Query: 64  VIHSRWAMLGALGCVFPELLA 2
           VIHSRWAMLGALGCVFPELLA
Sbjct: 101 VIHSRWAMLGALGCVFPELLA 121


>ref|XP_002316737.1| light-harvesting complex II protein Lhcb1 [Populus trichocarpa]
           gi|222859802|gb|EEE97349.1| light-harvesting complex II
           protein Lhcb1 [Populus trichocarpa]
          Length = 264

 Score =  170 bits (430), Expect = 1e-40
 Identities = 76/80 (95%), Positives = 79/80 (98%)
 Frame = -1

Query: 241 SKPASSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEV 62
           +KP SSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETF+KNRELEV
Sbjct: 39  TKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV 98

Query: 61  IHSRWAMLGALGCVFPELLA 2
           IHSRWAMLGALGCVFPELL+
Sbjct: 99  IHSRWAMLGALGCVFPELLS 118


>gb|AFW90565.1| chlorophyll a-b binding protein 3C-like mRNA [Solanum tuberosum]
          Length = 233

 Score =  169 bits (429), Expect = 2e-40
 Identities = 77/81 (95%), Positives = 79/81 (97%)
 Frame = -1

Query: 244 KSKPASSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFSKNRELE 65
           K+KPASSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETF+KNRELE
Sbjct: 7   KAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE 66

Query: 64  VIHSRWAMLGALGCVFPELLA 2
           VIH RWAMLGALGCVFPELLA
Sbjct: 67  VIHCRWAMLGALGCVFPELLA 87


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