BLASTX nr result

ID: Scutellaria23_contig00000107 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00000107
         (497 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004147416.1| PREDICTED: chlorophyll a-b binding protein 4...   336   1e-90
ref|XP_004170962.1| PREDICTED: chlorophyll a-b binding protein o...   334   4e-90
ref|XP_004148579.1| PREDICTED: chlorophyll a-b binding protein 3...   334   4e-90
ref|XP_004134608.1| PREDICTED: chlorophyll a-b binding protein o...   334   4e-90
ref|XP_004134603.1| PREDICTED: chlorophyll a-b binding protein o...   334   4e-90

>ref|XP_004147416.1| PREDICTED: chlorophyll a-b binding protein 40, chloroplastic-like
           [Cucumis sativus]
          Length = 265

 Score =  336 bits (861), Expect = 1e-90
 Identities = 162/165 (98%), Positives = 165/165 (100%)
 Frame = -1

Query: 497 FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFK 318
           FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFK
Sbjct: 73  FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFK 132

Query: 317 AGSQIFSDGGLDYLGNPSLVHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGG 138
           AGSQIFS+GGLDYLGNPSL+HAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGG
Sbjct: 133 AGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGG 192

Query: 137 SFDPLGLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 3
           SFDPLGLA+DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 193 SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 237


>ref|XP_004170962.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
           chloroplastic-like [Cucumis sativus]
          Length = 265

 Score =  334 bits (857), Expect = 4e-90
 Identities = 162/165 (98%), Positives = 164/165 (99%)
 Frame = -1

Query: 497 FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFK 318
           FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFK
Sbjct: 73  FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFK 132

Query: 317 AGSQIFSDGGLDYLGNPSLVHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGG 138
           AGSQIFS+GGLDYLGNPSLVHAQSILAIWA QVVLMGAVEGYRIAGGPLGEVTDPIYPGG
Sbjct: 133 AGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGG 192

Query: 137 SFDPLGLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 3
           SFDPLGLA+DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 193 SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 237


>ref|XP_004148579.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
           [Cucumis sativus] gi|449518125|ref|XP_004166094.1|
           PREDICTED: chlorophyll a-b binding protein 3C,
           chloroplastic-like [Cucumis sativus]
          Length = 265

 Score =  334 bits (857), Expect = 4e-90
 Identities = 160/165 (96%), Positives = 165/165 (100%)
 Frame = -1

Query: 497 FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFK 318
           FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFK
Sbjct: 73  FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFK 132

Query: 317 AGSQIFSDGGLDYLGNPSLVHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGG 138
           AGSQIFS+GGLDYLGNPSL+HAQSILAIWASQVVLMGAVEGYRIAGGPLGE+TDPIYPGG
Sbjct: 133 AGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEITDPIYPGG 192

Query: 137 SFDPLGLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 3
           SFDPLGLA+DPEAF+ELKVKELKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 193 SFDPLGLADDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKG 237


>ref|XP_004134608.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
           chloroplastic-like [Cucumis sativus]
          Length = 265

 Score =  334 bits (857), Expect = 4e-90
 Identities = 162/165 (98%), Positives = 164/165 (99%)
 Frame = -1

Query: 497 FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFK 318
           FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFK
Sbjct: 73  FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFK 132

Query: 317 AGSQIFSDGGLDYLGNPSLVHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGG 138
           AGSQIFS+GGLDYLGNPSLVHAQSILAIWA QVVLMGAVEGYRIAGGPLGEVTDPIYPGG
Sbjct: 133 AGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGG 192

Query: 137 SFDPLGLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 3
           SFDPLGLA+DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 193 SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 237


>ref|XP_004134603.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
           chloroplastic-like isoform 1 [Cucumis sativus]
           gi|449433638|ref|XP_004134604.1| PREDICTED: chlorophyll
           a-b binding protein of LHCII type I, chloroplastic-like
           isoform 2 [Cucumis sativus]
           gi|449433640|ref|XP_004134605.1| PREDICTED: chlorophyll
           a-b binding protein of LHCII type I, chloroplastic-like
           isoform 3 [Cucumis sativus]
          Length = 265

 Score =  334 bits (857), Expect = 4e-90
 Identities = 162/165 (98%), Positives = 164/165 (99%)
 Frame = -1

Query: 497 FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFK 318
           FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFK
Sbjct: 73  FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFK 132

Query: 317 AGSQIFSDGGLDYLGNPSLVHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGG 138
           AGSQIFS+GGLDYLGNPSLVHAQSILAIWA QVVLMGAVEGYRIAGGPLGEVTDPIYPGG
Sbjct: 133 AGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGG 192

Query: 137 SFDPLGLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 3
           SFDPLGLA+DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 193 SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 237


Top