BLASTX nr result

ID: Scutellaria23_contig00000106 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00000106
         (1443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADB85091.1| ribulose 1,5-bisphosphate carboxylase small subun...   293   8e-77
dbj|BAI53119.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ...   292   1e-76
ref|XP_002532149.1| Ribulose bisphosphate carboxylase small chai...   291   2e-76
gb|AAA33866.1| ribulose 1,5-bisphosphate carboxylase small subun...   287   5e-75
gb|AFK48034.1| unknown [Lotus japonicus]                              286   9e-75

>gb|ADB85091.1| ribulose 1,5-bisphosphate carboxylase small subunit [Jatropha curcas]
          Length = 181

 Score =  293 bits (750), Expect = 8e-77
 Identities = 140/180 (77%), Positives = 157/180 (87%), Gaps = 2/180 (1%)
 Frame = +3

Query: 576  MASSMVSTAAV--VGRTTPAQASMVAPFTGLKSVSAFPATRKNADITTIANNGGRVSCMK 749
            MASSM+STA V  + R +PAQA+MVAPFTGLKS + FPA +   DIT+IA NGGRV CMK
Sbjct: 1    MASSMLSTATVASINRASPAQATMVAPFTGLKSTAGFPARKTTNDITSIAGNGGRVQCMK 60

Query: 750  VWPTEGVKKFETLSYLPPLTREQLIKEVEYLLRSNLIPCLEFELKDGFVYRENNRSPGYY 929
            VWPT+G+KKFETLSYLPPLTREQL KEVEYLLRS  +PCLEFEL+ GFVYRENNRSPGYY
Sbjct: 61   VWPTQGLKKFETLSYLPPLTREQLAKEVEYLLRSGWVPCLEFELEHGFVYRENNRSPGYY 120

Query: 930  DGRYWTMWKLPMFGCTDAVQVVNELDEAAKAYPTAFIRIIGFDNVRQVQVISFIAHRPPG 1109
            DGRYWTMWKLPMFGCTDAVQV+NELDEA KA+P  F+RIIGFD+ RQVQ ISFIA++P G
Sbjct: 121  DGRYWTMWKLPMFGCTDAVQVLNELDEAIKAHPNGFVRIIGFDSYRQVQCISFIAYKPKG 180


>dbj|BAI53119.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
            [Eucalyptus globulus]
          Length = 181

 Score =  292 bits (748), Expect = 1e-76
 Identities = 138/181 (76%), Positives = 160/181 (88%), Gaps = 2/181 (1%)
 Frame = +3

Query: 576  MASSMVSTAAV--VGRTTPAQASMVAPFTGLKSVSAFPATRKNADITTIANNGGRVSCMK 749
            MASS+VS+AAV  V R +PAQASMVAPFTGLKS SAFP TRK+ADIT++A+NGGRV CM+
Sbjct: 1    MASSIVSSAAVAAVNRASPAQASMVAPFTGLKSASAFPVTRKSADITSLASNGGRVQCMQ 60

Query: 750  VWPTEGVKKFETLSYLPPLTREQLIKEVEYLLRSNLIPCLEFELKDGFVYRENNRSPGYY 929
            VWP  G KKFETLSYLPPL+RE+L+KE+EYLLR N +PCLEFEL+ GFVYR+N++SPGYY
Sbjct: 61   VWPPIGKKKFETLSYLPPLSREELLKEIEYLLRMNWVPCLEFELEKGFVYRDNHKSPGYY 120

Query: 930  DGRYWTMWKLPMFGCTDAVQVVNELDEAAKAYPTAFIRIIGFDNVRQVQVISFIAHRPPG 1109
            DGRYWTMWKLPMFGCTD +QV  ELDEA K YP AF+RIIGFDN RQVQ ISFIA++PPG
Sbjct: 121  DGRYWTMWKLPMFGCTDPLQVFKELDEAIKTYPNAFVRIIGFDNKRQVQCISFIAYKPPG 180

Query: 1110 Y 1112
            +
Sbjct: 181  F 181


>ref|XP_002532149.1| Ribulose bisphosphate carboxylase small chain, chloroplast precursor,
            putative [Ricinus communis] gi|223528159|gb|EEF30223.1|
            Ribulose bisphosphate carboxylase small chain,
            chloroplast precursor, putative [Ricinus communis]
          Length = 185

 Score =  291 bits (746), Expect = 2e-76
 Identities = 143/182 (78%), Positives = 157/182 (86%), Gaps = 3/182 (1%)
 Frame = +3

Query: 576  MASSMVSTAAV--VGRTTPAQASMVAPFTGLKSVSAFPATRK-NADITTIANNGGRVSCM 746
            MASSM+STA V  + R +PAQASMVAPFTGLKS SAFP TRK N DITT+ANNGGRV CM
Sbjct: 1    MASSMLSTATVASLNRASPAQASMVAPFTGLKSTSAFPVTRKTNTDITTLANNGGRVQCM 60

Query: 747  KVWPTEGVKKFETLSYLPPLTREQLIKEVEYLLRSNLIPCLEFELKDGFVYRENNRSPGY 926
            +VWP  G KKFETLSYLP LTREQL KEVEYLLR   +PCLEFEL+ GFVYREN RSPGY
Sbjct: 61   QVWPPLGKKKFETLSYLPDLTREQLAKEVEYLLRKGWVPCLEFELEHGFVYRENARSPGY 120

Query: 927  YDGRYWTMWKLPMFGCTDAVQVVNELDEAAKAYPTAFIRIIGFDNVRQVQVISFIAHRPP 1106
            YDGRYWTMWKLPMFGC+DAVQV+ ELDEA KAYP +F+RIIGFDNVRQVQ ISFIA++PP
Sbjct: 121  YDGRYWTMWKLPMFGCSDAVQVLKELDEAIKAYPNSFVRIIGFDNVRQVQCISFIAYKPP 180

Query: 1107 GY 1112
             +
Sbjct: 181  SF 182


>gb|AAA33866.1| ribulose 1,5-bisphosphate carboxylase small subunit [Malus x
            domestica x Pyrus communis]
          Length = 179

 Score =  287 bits (734), Expect = 5e-75
 Identities = 136/178 (76%), Positives = 154/178 (86%)
 Frame = +3

Query: 576  MASSMVSTAAVVGRTTPAQASMVAPFTGLKSVSAFPATRKNADITTIANNGGRVSCMKVW 755
            MASSM+S+  V   + PAQA MVAPFTGLKS SAFP TRK+ DIT+IA+NGGRV CM+VW
Sbjct: 1    MASSMISSGTVATVSAPAQARMVAPFTGLKSSSAFPVTRKSNDITSIASNGGRVQCMQVW 60

Query: 756  PTEGVKKFETLSYLPPLTREQLIKEVEYLLRSNLIPCLEFELKDGFVYRENNRSPGYYDG 935
            P  G+KKFETLSYLPPL+ E L KEV+YLLR N +PCLEFEL+ GFVYRENNRSPGYYDG
Sbjct: 61   PPLGLKKFETLSYLPPLSTESLAKEVDYLLRKNWVPCLEFELEHGFVYRENNRSPGYYDG 120

Query: 936  RYWTMWKLPMFGCTDAVQVVNELDEAAKAYPTAFIRIIGFDNVRQVQVISFIAHRPPG 1109
            RYWTMWKLPMFGCTD+ QV+ EL+EA KAYP +FIRIIGFDNVRQVQ ISFIA++PPG
Sbjct: 121  RYWTMWKLPMFGCTDSSQVLKELEEAKKAYPQSFIRIIGFDNVRQVQCISFIAYKPPG 178


>gb|AFK48034.1| unknown [Lotus japonicus]
          Length = 181

 Score =  286 bits (732), Expect = 9e-75
 Identities = 135/181 (74%), Positives = 155/181 (85%), Gaps = 2/181 (1%)
 Frame = +3

Query: 576  MASSMVSTAAV--VGRTTPAQASMVAPFTGLKSVSAFPATRKNADITTIANNGGRVSCMK 749
            MASSM++++AV  +   +PAQA+MVAPFTGLKS++ FP  + N DIT+IANNGGRV CM+
Sbjct: 1    MASSMITSSAVTTINSASPAQANMVAPFTGLKSMAGFPVRKVNNDITSIANNGGRVQCMQ 60

Query: 750  VWPTEGVKKFETLSYLPPLTREQLIKEVEYLLRSNLIPCLEFELKDGFVYRENNRSPGYY 929
            VWP  G KKFETLSYLPPLT EQL+KEVEYLLR   +PCLEFE + GFVYREN++SPGYY
Sbjct: 61   VWPPIGKKKFETLSYLPPLTTEQLLKEVEYLLRKGWVPCLEFETEKGFVYRENHKSPGYY 120

Query: 930  DGRYWTMWKLPMFGCTDAVQVVNELDEAAKAYPTAFIRIIGFDNVRQVQVISFIAHRPPG 1109
            DGRYWTMWKLPMFGC+DA QV+ ELDEA KAYP AF+RIIGFDNVRQVQ ISFIAHRP G
Sbjct: 121  DGRYWTMWKLPMFGCSDATQVLKELDEAVKAYPNAFVRIIGFDNVRQVQCISFIAHRPAG 180

Query: 1110 Y 1112
            Y
Sbjct: 181  Y 181


Top