BLASTX nr result

ID: Scutellaria23_contig00000097 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00000097
         (1291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P13869.1|CB12_PETHY RecName: Full=Chlorophyll a-b binding pro...   486   e-135
ref|XP_002299309.1| light-harvesting complex I protein Lhca2 [Po...   486   e-135
gb|ABK95596.1| unknown [Populus trichocarpa]                          486   e-135
sp|P10708.1|CB12_SOLLC RecName: Full=Chlorophyll a-b binding pro...   485   e-134
gb|ABK95601.1| unknown [Populus trichocarpa]                          485   e-134

>sp|P13869.1|CB12_PETHY RecName: Full=Chlorophyll a-b binding protein, chloroplastic;
            AltName: Full=LHCI type II CAB; Flags: Precursor
            gi|169214|gb|AAA33711.1| chlorophyll binding protein
            precursor [Petunia x hybrida] gi|226259|prf||1503272A
            chlorophyll binding protein
          Length = 270

 Score =  486 bits (1251), Expect = e-135
 Identities = 230/251 (91%), Positives = 238/251 (94%), Gaps = 1/251 (0%)
 Frame = -3

Query: 1019 QKNGSIVGATKASFFGGGRKLRVSKFATPLSTRSVAV-CVAADPDRPLWFPGSTPPPWLD 843
            QKNGSIVGATKASF GG ++LRVSKF  P+ +RSVAV  VAADPDRPLWFPGSTPP WLD
Sbjct: 21   QKNGSIVGATKASFLGG-KRLRVSKFIAPVGSRSVAVSAVAADPDRPLWFPGSTPPEWLD 79

Query: 842  GSLPGDFGFDPLGLSSDPESLKWNTQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWY 663
            GSLPGDFGFDPLGL SDPESLKWN QAELVH RWAMLGAAGIFIPEFLTKIG+LNTPSWY
Sbjct: 80   GSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAAGIFIPEFLTKIGVLNTPSWY 139

Query: 662  TAGEQEYFTDTTTLFIVELFFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGG 483
            TAGEQEYFTDTTTLF++EL  IGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGG
Sbjct: 140  TAGEQEYFTDTTTLFVIELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGG 199

Query: 482  LWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPG 303
            LWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPG
Sbjct: 200  LWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPG 259

Query: 302  HATIFAAFTPK 270
            HATIFAAF+PK
Sbjct: 260  HATIFAAFSPK 270


>ref|XP_002299309.1| light-harvesting complex I protein Lhca2 [Populus trichocarpa]
            gi|222846567|gb|EEE84114.1| light-harvesting complex I
            protein Lhca2 [Populus trichocarpa]
          Length = 272

 Score =  486 bits (1251), Expect = e-135
 Identities = 224/250 (89%), Positives = 235/250 (94%)
 Frame = -3

Query: 1019 QKNGSIVGATKASFFGGGRKLRVSKFATPLSTRSVAVCVAADPDRPLWFPGSTPPPWLDG 840
            QK G +VG+TKASF  G +KLR+ K+  P + RSV VCVAADPDRPLWFPGSTPPPWLDG
Sbjct: 24   QKTGFLVGSTKASFLSG-KKLRLKKYTAPTAARSVTVCVAADPDRPLWFPGSTPPPWLDG 82

Query: 839  SLPGDFGFDPLGLSSDPESLKWNTQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYT 660
            SLPGDFGFDPLGL SDPE+L+WN QAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYT
Sbjct: 83   SLPGDFGFDPLGLGSDPETLRWNVQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYT 142

Query: 659  AGEQEYFTDTTTLFIVELFFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGL 480
            AGE EYFTDTTTLFIVELFFIGWAEGRRWADI+KPGCVNTDPIFPNNKLTGTDVGYPGGL
Sbjct: 143  AGELEYFTDTTTLFIVELFFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGL 202

Query: 479  WFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGH 300
            WFDPLGWGSGSP KIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGH
Sbjct: 203  WFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGH 262

Query: 299  ATIFAAFTPK 270
            AT+F+AFTPK
Sbjct: 263  ATVFSAFTPK 272


>gb|ABK95596.1| unknown [Populus trichocarpa]
          Length = 269

 Score =  486 bits (1251), Expect = e-135
 Identities = 224/250 (89%), Positives = 235/250 (94%)
 Frame = -3

Query: 1019 QKNGSIVGATKASFFGGGRKLRVSKFATPLSTRSVAVCVAADPDRPLWFPGSTPPPWLDG 840
            QK G +VG+TKASF  G +KLR+ K+  P + RSV VCVAADPDRPLWFPGSTPPPWLDG
Sbjct: 21   QKTGFLVGSTKASFLSG-KKLRLKKYTAPTAARSVTVCVAADPDRPLWFPGSTPPPWLDG 79

Query: 839  SLPGDFGFDPLGLSSDPESLKWNTQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYT 660
            SLPGDFGFDPLGL SDPE+L+WN QAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYT
Sbjct: 80   SLPGDFGFDPLGLGSDPETLRWNVQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYT 139

Query: 659  AGEQEYFTDTTTLFIVELFFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGL 480
            AGE EYFTDTTTLFIVELFFIGWAEGRRWADI+KPGCVNTDPIFPNNKLTGTDVGYPGGL
Sbjct: 140  AGELEYFTDTTTLFIVELFFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGL 199

Query: 479  WFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGH 300
            WFDPLGWGSGSP KIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGH
Sbjct: 200  WFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGH 259

Query: 299  ATIFAAFTPK 270
            AT+F+AFTPK
Sbjct: 260  ATVFSAFTPK 269


>sp|P10708.1|CB12_SOLLC RecName: Full=Chlorophyll a-b binding protein 7, chloroplastic;
            AltName: Full=LHCI type II CAB-7; Flags: Precursor
            gi|19180|emb|CAA32197.1| chlorophyll a/b-binding protein
            [Solanum lycopersicum] gi|170431|gb|AAA34159.1|
            chlorophyll a/b-binding protein [Solanum lycopersicum]
            gi|226546|prf||1601518A chlorophyll a/b binding protein
            II
          Length = 270

 Score =  485 bits (1248), Expect = e-134
 Identities = 229/251 (91%), Positives = 238/251 (94%), Gaps = 1/251 (0%)
 Frame = -3

Query: 1019 QKNGSIVGATKASFFGGGRKLRVSKFATPLSTRSVA-VCVAADPDRPLWFPGSTPPPWLD 843
            ++NGSIVG TKASF GG R+LRVSK++T  + RS   VCVAADPDRPLWFPGSTPPPWLD
Sbjct: 21   RRNGSIVGTTKASFLGG-RRLRVSKYSTTPTARSATTVCVAADPDRPLWFPGSTPPPWLD 79

Query: 842  GSLPGDFGFDPLGLSSDPESLKWNTQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWY 663
            GSLPGDFGFDPLGL+SDPESL+WN QAELVHCRWAMLGAAGIFIPE LTKIGILNTPSWY
Sbjct: 80   GSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPELLTKIGILNTPSWY 139

Query: 662  TAGEQEYFTDTTTLFIVELFFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGG 483
            TAGEQEYFTDTTTLFIVEL  IGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGG
Sbjct: 140  TAGEQEYFTDTTTLFIVELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGG 199

Query: 482  LWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPG 303
            LWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPG
Sbjct: 200  LWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPG 259

Query: 302  HATIFAAFTPK 270
            HATIFAAF+PK
Sbjct: 260  HATIFAAFSPK 270


>gb|ABK95601.1| unknown [Populus trichocarpa]
          Length = 269

 Score =  485 bits (1248), Expect = e-134
 Identities = 224/250 (89%), Positives = 236/250 (94%)
 Frame = -3

Query: 1019 QKNGSIVGATKASFFGGGRKLRVSKFATPLSTRSVAVCVAADPDRPLWFPGSTPPPWLDG 840
            QK GS+VG+TKASF  G +KLR+  + +P + RSV VCVAADPDRPLWFPGSTPPPWLDG
Sbjct: 21   QKTGSLVGSTKASFLRG-KKLRLRTYTSPTAARSVTVCVAADPDRPLWFPGSTPPPWLDG 79

Query: 839  SLPGDFGFDPLGLSSDPESLKWNTQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYT 660
            SLPGDFGFDPLGL SDPE+L+WN QAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWY+
Sbjct: 80   SLPGDFGFDPLGLGSDPETLRWNVQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYS 139

Query: 659  AGEQEYFTDTTTLFIVELFFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGL 480
            AGE EYFTDTTTLFIVELFFIGWAEGRRWADI+KPGCVNTDPIFPNNKLTGTDVGYPGGL
Sbjct: 140  AGEVEYFTDTTTLFIVELFFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGL 199

Query: 479  WFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGH 300
            WFDPLGWGSGSP KIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGH
Sbjct: 200  WFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGH 259

Query: 299  ATIFAAFTPK 270
            AT+FAAFTPK
Sbjct: 260  ATVFAAFTPK 269


Top