BLASTX nr result

ID: Scutellaria23_contig00000087 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00000087
         (2136 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P27524.1|CB4A_SOLLC RecName: Full=Chlorophyll a-b binding pro...   445   e-122
ref|XP_002263201.1| PREDICTED: chlorophyll a-b binding protein C...   437   e-120
gb|ABG73416.1| chloroplast pigment-binding protein CP24 [Nicotia...   436   e-119
ref|XP_002533515.1| chlorophyll A/B binding protein, putative [R...   435   e-119
gb|AAD27882.2|AF139470_1 chlorophyll a/b-binding protein CP24 pr...   432   e-118

>sp|P27524.1|CB4A_SOLLC RecName: Full=Chlorophyll a-b binding protein CP24 10A,
            chloroplastic; Short=CAB-10A; Short=LHCP; Flags:
            Precursor gi|170394|gb|AAA34143.1| a-binding protein
            [Solanum lycopersicum]
          Length = 256

 Score =  445 bits (1145), Expect = e-122
 Identities = 211/248 (85%), Positives = 226/248 (91%)
 Frame = -2

Query: 1799 MTSTSAALLNGLGSAFLTGGKKSHALLSXXXXXXXXXXXAPKRFIVVAAAAKKSWIPAVK 1620
            M +TSAA+LNGL S+FLTGG KS ALL+            PKRF V+AAAAKKSWIPAV+
Sbjct: 1    MATTSAAVLNGLSSSFLTGGNKSQALLAAPLAARVGGAATPKRFTVLAAAAKKSWIPAVR 60

Query: 1619 GGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAW 1440
            GGGN +DPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAW
Sbjct: 61   GGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAW 120

Query: 1439 SGIPWFEAGAAPSAVAPFSFGTLLGTQLILMGWVESKRWVDFFNPESQSVEWATPWSRTS 1260
            SGIPWFEAGA P A+APFSFGTLLGTQLILMGWVESKRWVDFF+P+SQSVEWATPWS+T+
Sbjct: 121  SGIPWFEAGADPGAIAPFSFGTLLGTQLILMGWVESKRWVDFFDPDSQSVEWATPWSKTA 180

Query: 1259 ENFANATGEQGYPGGKFFDPLGVAGTLNNGVYVPDTEKLERLKLAEIKHARLAMVAMLIF 1080
            ENFAN TGEQGYPGGKFFDPL +AGTLNNGVYVPDTEKLERLK+AEIKHARLAM+AMLIF
Sbjct: 181  ENFANFTGEQGYPGGKFFDPLALAGTLNNGVYVPDTEKLERLKVAEIKHARLAMLAMLIF 240

Query: 1079 YFEAGQGK 1056
            YFEAGQGK
Sbjct: 241  YFEAGQGK 248


>ref|XP_002263201.1| PREDICTED: chlorophyll a-b binding protein CP24 10A, chloroplastic
            [Vitis vinifera] gi|147804704|emb|CAN71620.1|
            hypothetical protein VITISV_015544 [Vitis vinifera]
          Length = 257

 Score =  437 bits (1125), Expect = e-120
 Identities = 208/249 (83%), Positives = 224/249 (89%), Gaps = 1/249 (0%)
 Frame = -2

Query: 1799 MTSTSAALLNGLGSAFLTGGKKSHALLSXXXXXXXXXXXA-PKRFIVVAAAAKKSWIPAV 1623
            M +TSAA+LNGLGS FLTGGK+S +LLS             P+R IVVAAA KKSW+P V
Sbjct: 1    MAATSAAVLNGLGSPFLTGGKRSQSLLSAGVAAKAGAAVPAPRRLIVVAAAPKKSWLPGV 60

Query: 1622 KGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQA 1443
            K GGN +DPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV+GIFVGQA
Sbjct: 61   KAGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQA 120

Query: 1442 WSGIPWFEAGAAPSAVAPFSFGTLLGTQLILMGWVESKRWVDFFNPESQSVEWATPWSRT 1263
            WSGIPWFEAGAAP AVAPFSFGTLLGTQL+LMGWVESKRWVDFFNPESQSVEWATPWSRT
Sbjct: 121  WSGIPWFEAGAAPGAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRT 180

Query: 1262 SENFANATGEQGYPGGKFFDPLGVAGTLNNGVYVPDTEKLERLKLAEIKHARLAMVAMLI 1083
            +ENFANATGEQGYPGGKFFDPL +AGT+ +GVY+PD EKLERLKLAEIKHAR+AM+AMLI
Sbjct: 181  AENFANATGEQGYPGGKFFDPLSLAGTIKDGVYIPDVEKLERLKLAEIKHARIAMLAMLI 240

Query: 1082 FYFEAGQGK 1056
            FYFEAGQGK
Sbjct: 241  FYFEAGQGK 249


>gb|ABG73416.1| chloroplast pigment-binding protein CP24 [Nicotiana tabacum]
          Length = 257

 Score =  436 bits (1120), Expect = e-119
 Identities = 209/249 (83%), Positives = 223/249 (89%), Gaps = 1/249 (0%)
 Frame = -2

Query: 1799 MTSTSAALLNGLGSAFLTGGKKSHALLSXXXXXXXXXXXAPKRFIVVAAAA-KKSWIPAV 1623
            M +TSAA+LNGL S+FLTGGK S ALL             PKR IV AAAA KKSWIPAV
Sbjct: 1    MATTSAAVLNGLSSSFLTGGKNSQALLGAPVAARIGGLATPKRCIVAAAAAPKKSWIPAV 60

Query: 1622 KGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQA 1443
            KGGGN +DPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQA
Sbjct: 61   KGGGNLLDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQA 120

Query: 1442 WSGIPWFEAGAAPSAVAPFSFGTLLGTQLILMGWVESKRWVDFFNPESQSVEWATPWSRT 1263
            WSGIPWFEAGA P A+APFSFG+LLGTQL+LMGWVESKRWVDFFNPESQSVEWATPWS+T
Sbjct: 121  WSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSKT 180

Query: 1262 SENFANATGEQGYPGGKFFDPLGVAGTLNNGVYVPDTEKLERLKLAEIKHARLAMVAMLI 1083
            +ENFAN TGEQGYPGGKFFDPL +AGTL +GVY+PDTEKLERLK+AEIKHARLAM+AMLI
Sbjct: 181  AENFANFTGEQGYPGGKFFDPLSLAGTLQDGVYIPDTEKLERLKVAEIKHARLAMLAMLI 240

Query: 1082 FYFEAGQGK 1056
            FYFEAGQGK
Sbjct: 241  FYFEAGQGK 249


>ref|XP_002533515.1| chlorophyll A/B binding protein, putative [Ricinus communis]
            gi|223526625|gb|EEF28871.1| chlorophyll A/B binding
            protein, putative [Ricinus communis]
          Length = 256

 Score =  435 bits (1118), Expect = e-119
 Identities = 208/246 (84%), Positives = 223/246 (90%)
 Frame = -2

Query: 1793 STSAALLNGLGSAFLTGGKKSHALLSXXXXXXXXXXXAPKRFIVVAAAAKKSWIPAVKGG 1614
            +TS A+LNGLGS+FL G K+SHALLS           + K F+V+AA  KKSWIPAVKGG
Sbjct: 4    ATSGAVLNGLGSSFLRGPKRSHALLSAIGANRTASGASTK-FVVMAAQPKKSWIPAVKGG 62

Query: 1613 GNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSG 1434
            GNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV+GIFVGQAWSG
Sbjct: 63   GNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVIGIFVGQAWSG 122

Query: 1433 IPWFEAGAAPSAVAPFSFGTLLGTQLILMGWVESKRWVDFFNPESQSVEWATPWSRTSEN 1254
            IPWFEAGA P A+APFSFG+LLGTQLILMGWVESKRWVDFFNP+SQSVEWATPWSRTSEN
Sbjct: 123  IPWFEAGADPGAIAPFSFGSLLGTQLILMGWVESKRWVDFFNPDSQSVEWATPWSRTSEN 182

Query: 1253 FANATGEQGYPGGKFFDPLGVAGTLNNGVYVPDTEKLERLKLAEIKHARLAMVAMLIFYF 1074
            FANATGEQGYPGGKFFDPLG AGTL +GVY+PD EKLERLK+AEIKHARLAM+AMLIFYF
Sbjct: 183  FANATGEQGYPGGKFFDPLGFAGTLKDGVYIPDVEKLERLKVAEIKHARLAMLAMLIFYF 242

Query: 1073 EAGQGK 1056
            EAGQGK
Sbjct: 243  EAGQGK 248


>gb|AAD27882.2|AF139470_1 chlorophyll a/b-binding protein CP24 precursor [Vigna radiata]
          Length = 258

 Score =  432 bits (1110), Expect = e-118
 Identities = 203/247 (82%), Positives = 225/247 (91%), Gaps = 1/247 (0%)
 Frame = -2

Query: 1793 STSAALLNGLGSAFLTGGKKSHALLSXXXXXXXXXXXAPKRFIVVAAAA-KKSWIPAVKG 1617
            +TS A+LNGLGS+FL+GG +S  LL+           +P+R IVVAAAA KKSWIP V+G
Sbjct: 4    ATSGAVLNGLGSSFLSGGSRSQTLLATSIGGKVGVAVSPRRLIVVAAAAPKKSWIPGVRG 63

Query: 1616 GGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWS 1437
            GGN +DPEWLDGSLPGD+GFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWS
Sbjct: 64   GGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWS 123

Query: 1436 GIPWFEAGAAPSAVAPFSFGTLLGTQLILMGWVESKRWVDFFNPESQSVEWATPWSRTSE 1257
            G+PWFEAGA P+A+APFSFG+LLGTQLILMGWVESKRWVDFFNP+SQSVEWATPWS+T+E
Sbjct: 124  GVPWFEAGADPNAIAPFSFGSLLGTQLILMGWVESKRWVDFFNPDSQSVEWATPWSKTAE 183

Query: 1256 NFANATGEQGYPGGKFFDPLGVAGTLNNGVYVPDTEKLERLKLAEIKHARLAMVAMLIFY 1077
            NFANATGEQGYPGGKFFDPLG AGTL +GVY+PDTEKLERLKLAEIKHAR+AM+AMLIFY
Sbjct: 184  NFANATGEQGYPGGKFFDPLGFAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFY 243

Query: 1076 FEAGQGK 1056
            FEAGQGK
Sbjct: 244  FEAGQGK 250


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