BLASTX nr result

ID: Scutellaria22_contig00037918 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00037918
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283262.2| PREDICTED: pentatricopeptide repeat-containi...   117   7e-25
ref|XP_004134398.1| PREDICTED: pentatricopeptide repeat-containi...   112   4e-23
ref|XP_003532686.1| PREDICTED: pentatricopeptide repeat-containi...   111   7e-23
ref|XP_003524140.1| PREDICTED: pentatricopeptide repeat-containi...   110   2e-22
ref|XP_003576863.1| PREDICTED: pentatricopeptide repeat-containi...   109   3e-22

>ref|XP_002283262.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
           [Vitis vinifera]
          Length = 590

 Score =  117 bits (294), Expect = 7e-25
 Identities = 55/100 (55%), Positives = 72/100 (72%)
 Frame = -2

Query: 300 EKVAMTMPYKPDAAVWRVXXXXXXXNENPEFARRMAEKLLEINPNDDSAYVILANAFASV 121
           E++AMTMP++PDAAVWR        +   + A  M  +L+E++P DDSAYVI+AN  A+ 
Sbjct: 370 ERIAMTMPFEPDAAVWRALLSSCAMHGAADMAWAMGRRLMELDPQDDSAYVIVANVLATN 429

Query: 120 ARWDEVKKVWKTMRERRVRKEVGRSWIEVRGDIHVFFAGD 1
            RWDEV +V K M++R V+KE GRSWIEVRG +HVF AGD
Sbjct: 430 GRWDEVAEVRKMMKDRMVKKEGGRSWIEVRGKVHVFLAGD 469


>ref|XP_004134398.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
           gi|449487598|ref|XP_004157706.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 583

 Score =  112 bits (279), Expect = 4e-23
 Identities = 55/100 (55%), Positives = 71/100 (71%)
 Frame = -2

Query: 300 EKVAMTMPYKPDAAVWRVXXXXXXXNENPEFARRMAEKLLEINPNDDSAYVILANAFASV 121
           E+VAMTMP+ PD AVWR        +   + A  MA++LLE+N +DDSAYVI++NA +  
Sbjct: 366 ERVAMTMPFVPDEAVWRALLSSSASHGAGDMAWTMAKRLLELNQHDDSAYVIVSNALSVA 425

Query: 120 ARWDEVKKVWKTMRERRVRKEVGRSWIEVRGDIHVFFAGD 1
           ARW+EV  V K M+ER V+K  G+SWIEVRG+ HVF AGD
Sbjct: 426 ARWEEVALVRKLMKERHVKKISGKSWIEVRGEAHVFLAGD 465


>ref|XP_003532686.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Glycine max]
          Length = 561

 Score =  111 bits (277), Expect = 7e-23
 Identities = 51/100 (51%), Positives = 71/100 (71%)
 Frame = -2

Query: 300 EKVAMTMPYKPDAAVWRVXXXXXXXNENPEFARRMAEKLLEINPNDDSAYVILANAFASV 121
           E+V +TMP +PDAAVWR            + A  MA+++LE+ PNDD AYV +AN  +S 
Sbjct: 357 ERVVLTMPIEPDAAVWRALLSVCAYRGEADKAWSMAKRVLELEPNDDYAYVSVANVLSSA 416

Query: 120 ARWDEVKKVWKTMRERRVRKEVGRSWIEVRGDIHVFFAGD 1
            RWD+V ++ K M++RRV+K+ GRSWIEV+G++HVF AGD
Sbjct: 417 GRWDDVAELRKMMKDRRVKKKGGRSWIEVQGEVHVFVAGD 456


>ref|XP_003524140.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Glycine max]
          Length = 561

 Score =  110 bits (274), Expect = 2e-22
 Identities = 50/100 (50%), Positives = 72/100 (72%)
 Frame = -2

Query: 300 EKVAMTMPYKPDAAVWRVXXXXXXXNENPEFARRMAEKLLEINPNDDSAYVILANAFASV 121
           E+V +TMP++PDAAVWR            + A  MA+++LE+ P+DD AYV +AN  +S 
Sbjct: 357 ERVVLTMPFEPDAAVWRALLSVCAYRGEADKAWCMAKRVLELEPHDDYAYVSVANVLSSA 416

Query: 120 ARWDEVKKVWKTMRERRVRKEVGRSWIEVRGDIHVFFAGD 1
            RWD+V ++ K M++RRV+K+ GRSWIEV+G++HVF AGD
Sbjct: 417 GRWDDVAELRKMMKDRRVKKKGGRSWIEVQGEVHVFVAGD 456


>ref|XP_003576863.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Brachypodium distachyon]
          Length = 574

 Score =  109 bits (272), Expect = 3e-22
 Identities = 51/100 (51%), Positives = 66/100 (66%)
 Frame = -2

Query: 300 EKVAMTMPYKPDAAVWRVXXXXXXXNENPEFARRMAEKLLEINPNDDSAYVILANAFASV 121
           + +  TMP KPDAAVWR        +   + A  M ++LLEI+P DDSAYV+LAN +++ 
Sbjct: 369 DSIVCTMPCKPDAAVWRTLLAGCVVHHKADMAGVMGQRLLEIDPKDDSAYVMLANVYSAA 428

Query: 120 ARWDEVKKVWKTMRERRVRKEVGRSWIEVRGDIHVFFAGD 1
            R D+V + W  MR+  VRKE GRSWIEVRG +HVF A D
Sbjct: 429 GRSDDVAEAWTAMRDHGVRKEGGRSWIEVRGQVHVFVAND 468


Top