BLASTX nr result

ID: Scutellaria22_contig00037904 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00037904
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB10225.1| retrovirus-related like polyprotein [Arabidopsis...   106   2e-21
gb|ABM05483.1| LTR retrotransposon-like protein [Rhodiola fastig...   103   2e-20
emb|CAN76546.1| hypothetical protein VITISV_010420 [Vitis vinifera]   101   7e-20
emb|CAN74229.1| hypothetical protein VITISV_000584 [Vitis vinifera]   101   7e-20
emb|CAN81001.1| hypothetical protein VITISV_006992 [Vitis vinifera]   100   9e-20

>emb|CAB10225.1| retrovirus-related like polyprotein [Arabidopsis thaliana]
            gi|7268152|emb|CAB78488.1| retrovirus-related like
            polyprotein [Arabidopsis thaliana]
          Length = 1489

 Score =  106 bits (264), Expect = 2e-21
 Identities = 46/83 (55%), Positives = 61/83 (73%)
 Frame = -1

Query: 259  H*HSTYMSKPTEAHLAAVHRLLRYLKTNPGQGIFYPSQYNFKLQAFSDSDWARCEVTRRS 80
            H  S ++S P++ HL A H++LRY+K NPGQG+ Y + Y   L  FSD+DWA C+ TRRS
Sbjct: 1284 HQLSQFISAPSDIHLQAAHKVLRYIKANPGQGLMYSADYEICLNGFSDADWAACKDTRRS 1343

Query: 79   ISGYAVYIGDFLISWKSKKQRIA 11
            ISG+ +Y+G  LISWKSKKQ +A
Sbjct: 1344 ISGFCIYLGTSLISWKSKKQAVA 1366


>gb|ABM05483.1| LTR retrotransposon-like protein [Rhodiola fastigiata]
          Length = 383

 Score =  103 bits (256), Expect = 2e-20
 Identities = 47/82 (57%), Positives = 58/82 (70%)
 Frame = -1

Query: 259 H*HSTYMSKPTEAHLAAVHRLLRYLKTNPGQGIFYPSQYNFKLQAFSDSDWARCEVTRRS 80
           H  S +M+KPTE HLAA HR+LRYLK  P QG+FYPS    +L  F D+DW  C +TRRS
Sbjct: 197 HILSQFMNKPTEDHLAAAHRVLRYLKGCPAQGVFYPSNQTLQLSVFCDADWGSCPLTRRS 256

Query: 79  ISGYAVYIGDFLISWKSKKQRI 14
           +SG  V +G  +ISWK+KKQ I
Sbjct: 257 VSGCCVLLGQSVISWKTKKQAI 278


>emb|CAN76546.1| hypothetical protein VITISV_010420 [Vitis vinifera]
          Length = 1288

 Score =  101 bits (251), Expect = 7e-20
 Identities = 43/79 (54%), Positives = 60/79 (75%)
 Frame = -1

Query: 250  STYMSKPTEAHLAAVHRLLRYLKTNPGQGIFYPSQYNFKLQAFSDSDWARCEVTRRSISG 71
            S ++S+P   HL A  R+LRYLK NPG G+F+PS    +L A++DSDWARC  +RRS++G
Sbjct: 1091 SQFISRPKLPHLHAAQRILRYLKGNPGMGLFFPSNSELRLMAYTDSDWARCPDSRRSVTG 1150

Query: 70   YAVYIGDFLISWKSKKQRI 14
            + V++G+ L+SWKSKKQ I
Sbjct: 1151 FCVFLGNSLVSWKSKKQHI 1169


>emb|CAN74229.1| hypothetical protein VITISV_000584 [Vitis vinifera]
          Length = 1039

 Score =  101 bits (251), Expect = 7e-20
 Identities = 43/80 (53%), Positives = 61/80 (76%)
 Frame = -1

Query: 259  H*HSTYMSKPTEAHLAAVHRLLRYLKTNPGQGIFYPSQYNFKLQAFSDSDWARCEVTRRS 80
            H  S +M +P + HL AVH LLRYLK   GQG+++P++ N  L+ F D+DWARC +TRRS
Sbjct: 839  HILSQFMQEPRKPHLHAVHHLLRYLKGALGQGLYFPAKGNLLLRGFCDADWARCSITRRS 898

Query: 79   ISGYAVYIGDFLISWKSKKQ 20
            ++GY +++G+ LISWK+KKQ
Sbjct: 899  VTGYCIFLGEALISWKTKKQ 918


>emb|CAN81001.1| hypothetical protein VITISV_006992 [Vitis vinifera]
          Length = 1131

 Score =  100 bits (250), Expect = 9e-20
 Identities = 42/80 (52%), Positives = 60/80 (75%)
 Frame = -1

Query: 259  H*HSTYMSKPTEAHLAAVHRLLRYLKTNPGQGIFYPSQYNFKLQAFSDSDWARCEVTRRS 80
            H  S +M +P + HL  VH LL+YLK  PGQG+++P++ N  L+ F D+DWARC +TRRS
Sbjct: 931  HILSQFMQEPRKPHLHVVHHLLQYLKGAPGQGLYFPAKGNLLLRGFCDADWARCSITRRS 990

Query: 79   ISGYAVYIGDFLISWKSKKQ 20
            ++GY +++G  LISWK+KKQ
Sbjct: 991  VTGYCIFLGGALISWKTKKQ 1010


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